RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 USP17L22D6RA61 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L17D6RBQ6 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L19D6RCP7 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L20D6RJB6 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 S1PR4O95977 384 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 RASA1P20936 1047 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 USP17L24Q0WX57 530 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 EML3Q32P44 896 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 MAP7D1Q3KQU3 841 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 TMEM164Q5U3C3 297 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 PTCRAQ6ISU1 281 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-203ENST00000537024 SH3BP5LQ7L8J4 393 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 STK32AQ8WU08 396 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 CARD14Q9BXL6 1004 aa6.55□□□□□ -1.36
SNHG1-203ENST00000537024 MED14O60244 1454 aa6.54□□□□□ -1.36
SNHG1-203ENST00000537024 AGERQ15109 404 aa6.54□□□□□ -1.36
SNHG1-203ENST00000537024 CRTC2Q53ET0 693 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-203ENST00000537024 PHTF2Q8N3S3 785 aa6.54□□□□□ -1.36
SNHG1-203ENST00000537024 FAM200AQ8TCP9 573 aa6.54□□□□□ -1.36
SNHG1-203ENST00000537024 MLH3Q9UHC1 1453 aa6.53□□□□□ -1.36
SNHG1-203ENST00000537024 RGS12O14924 1447 aa6.53□□□□□ -1.36
SNHG1-203ENST00000537024 PLCH2O75038 1416 aa6.53□□□□□ -1.36
SNHG1-203ENST00000537024 BPHLQ86WA6 291 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-203ENST00000537024 TRIM50Q86XT4 487 aa6.53□□□□□ -1.36
SNHG1-203ENST00000537024 RGS22Q8NE09 1264 aa6.53□□□□□ -1.36
SNHG1-203ENST00000537024 MTMR7Q9Y216 660 aa6.53□□□□□ -1.36
SNHG1-203ENST00000537024 MYO5CQ9NQX4 1742 aa6.53□□□□□ -1.36
SNHG1-203ENST00000537024 ITSN2Q9NZM3 1697 aa6.52□□□□□ -1.37
SNHG1-203ENST00000537024 NPHP4O75161 1426 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-203ENST00000537024 ATP1A2P50993 1020 aa6.52□□□□□ -1.37
SNHG1-203ENST00000537024 PTK7Q13308 1070 aa6.52□□□□□ -1.37
SNHG1-203ENST00000537024 PLA2G2CQ5R387 149 aa6.52□□□□□ -1.37
SNHG1-203ENST00000537024 ZNF772Q68DY9 489 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-203ENST00000537024 CCER1Q8TC90 406 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-203ENST00000537024 BAP1Q92560 729 aa6.52□□□□□ -1.37
SNHG1-203ENST00000537024 CDCA7Q9BWT1 371 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-203ENST00000537024 CHIC2Q9UKJ5 165 aa6.52□□□□□ -1.37
SNHG1-203ENST00000537024 DOLKQ9UPQ8 538 aa6.52□□□□□ -1.37
SNHG1-203ENST00000537024 NOD1Q9Y239 953 aa6.52□□□□□ -1.37
SNHG1-203ENST00000537024 PHLPP1O60346 1717 aa6.52□□□□□ -1.37
SNHG1-203ENST00000537024 COL16A1Q07092 1604 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-203ENST00000537024 CCDC27Q2M243 656 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 LINC01559Q495D7 138 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 RNF20Q5VTR2 975 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 SND1Q7KZF4 910 aaKnown RBP eCLIP6.51□□□□□ -1.37
SNHG1-203ENST00000537024 SH3RF1Q7Z6J0 888 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 ANKMY2Q8IV38 441 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 OGFOD1Q8N543 542 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 SLC10A4Q96EP9 437 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 PKD2L1Q9P0L9 805 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 DACH1Q9UI36 760 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 GNEQ9Y223 722 aaKnown RBP6.51□□□□□ -1.37
SNHG1-203ENST00000537024 FCF1Q9Y324 198 aaKnown RBP6.51□□□□□ -1.37
SNHG1-203ENST00000537024 JCADQ9P266 1359 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 ZC3H13Q5T200 1668 aaKnown RBP6.51□□□□□ -1.37
SNHG1-203ENST00000537024 KIDINS220Q9ULH0 1771 aa6.51□□□□□ -1.37
SNHG1-203ENST00000537024 ABCC1P33527 1531 aa6.5□□□□□ -1.37
SNHG1-203ENST00000537024 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
SNHG1-203ENST00000537024 SAMD9Q5K651 1589 aa6.5□□□□□ -1.37
SNHG1-203ENST00000537024 RXRBP28702 533 aa6.5□□□□□ -1.37
SNHG1-203ENST00000537024 ERFEQ4G0M1 354 aa6.5□□□□□ -1.37
SNHG1-203ENST00000537024 OXLD1Q5BKU9 147 aa6.5□□□□□ -1.37
SNHG1-203ENST00000537024 CRIPAKQ8N1N5 446 aa6.5□□□□□ -1.37
SNHG1-203ENST00000537024 ZNF511Q8NB15 262 aa6.5□□□□□ -1.37
SNHG1-203ENST00000537024 ZNF594Q96JF6 807 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-203ENST00000537024 DNAAF2Q9NVR5 837 aaKnown RBP6.5□□□□□ -1.37
SNHG1-203ENST00000537024 RBM19Q9Y4C8 960 aaKnown RBP6.5□□□□□ -1.37
SNHG1-203ENST00000537024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.49□□□□□ -1.37
SNHG1-203ENST00000537024 GIGYF1O75420 1035 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-203ENST00000537024 DPYDQ12882 1025 aa6.49□□□□□ -1.37
SNHG1-203ENST00000537024 NBPF20Q3BBV1 942 aa6.49□□□□□ -1.37
SNHG1-203ENST00000537024 TSGA10IPQ3SY00 556 aa6.49□□□□□ -1.37
SNHG1-203ENST00000537024 FOXJ1Q92949 421 aa6.49□□□□□ -1.37
SNHG1-203ENST00000537024 CCDC85AQ96PX6 553 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-203ENST00000537024 SHPRHQ149N8 1683 aa6.49□□□□□ -1.37
SNHG1-203ENST00000537024 LRRC9Q6ZRR7 1453 aa6.48□□□□□ -1.37
SNHG1-203ENST00000537024 WFS1O76024 890 aa6.48□□□□□ -1.37
SNHG1-203ENST00000537024 ARID4AP29374 1257 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-203ENST00000537024 CLDN10P78369 228 aa6.48□□□□□ -1.37
SNHG1-203ENST00000537024 SWI5Q1ZZU3 235 aa6.48□□□□□ -1.37
SNHG1-203ENST00000537024 FOXD4L5Q5VV16 416 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-203ENST00000537024 LARGE2Q8N3Y3 721 aa6.48□□□□□ -1.37
SNHG1-203ENST00000537024 AFAP1Q8N556 730 aa6.48□□□□□ -1.37
SNHG1-203ENST00000537024 FOXD4L4Q8WXT5 416 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-203ENST00000537024 CLP1Q92989 425 aaKnown RBP6.48□□□□□ -1.37
SNHG1-203ENST00000537024 SIRT1Q96EB6 747 aa6.48□□□□□ -1.37
SNHG1-203ENST00000537024 EP400Q96L91 3159 aa6.48□□□□□ -1.37
SNHG1-203ENST00000537024 PLXNC1O60486 1568 aa6.48□□□□□ -1.37
SNHG1-203ENST00000537024 ATAD2Q6PL18 1390 aa6.47□□□□□ -1.37
SNHG1-203ENST00000537024 KDM5DQ9BY66 1539 aa6.47□□□□□ -1.37
SNHG1-203ENST00000537024 PLEKHD1A6NEE1 506 aa6.47□□□□□ -1.37
SNHG1-203ENST00000537024 ZBTB24O43167 697 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-203ENST00000537024 AVPP01185 164 aa6.47□□□□□ -1.37
SNHG1-203ENST00000537024 SSFA2P28290 1259 aa6.47□□□□□ -1.37
SNHG1-203ENST00000537024 GTF2IP78347 998 aa6.47□□□□□ -1.37
SNHG1-203ENST00000537024 PSME1Q06323 249 aa6.47□□□□□ -1.37
SNHG1-203ENST00000537024 FOXC1Q12948 553 aa6.47□□□□□ -1.37
SNHG1-203ENST00000537024 CDV3Q9UKY7 258 aaKnown RBP6.47□□□□□ -1.37
SNHG1-203ENST00000537024 KIF14Q15058 1648 aa6.47□□□□□ -1.37
SNHG1-203ENST00000537024 MAP3K1Q13233 1512 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms