RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	SLC6A16	Q9GZN6	736 aa		7.63	□□□□□ -1.19
ECHDC1-223	ENST00000534442	ABCC3	O15438	1527 aa		7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	CAMSAP2	Q08AD1	1489 aa		7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	MLH3	Q9UHC1	1453 aa		7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	MCCD1	P59942	119 aa	Predicted RBP	7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	DEPDC4	Q8N2C3	294 aa		7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	NKX2-3	Q8TAU0	364 aa		7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	KLRG1	Q96E93	195 aa		7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	ARHGAP9	Q9BRR9	750 aa		7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	CHIC2	Q9UKJ5	165 aa		7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	KDM5A	P29375	1690 aa	Known RBP	7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	PRDM15	P57071	1507 aa	Predicted RBP	7.62	□□□□□ -1.19
ECHDC1-223	ENST00000534442	BRD1	O95696	1058 aa		7.61	□□□□□ -1.19
ECHDC1-223	ENST00000534442	ZMIZ1	Q9ULJ6	1067 aa		7.61	□□□□□ -1.19
ECHDC1-223	ENST00000534442	A2M	P01023	1474 aa		7.61	□□□□□ -1.19
ECHDC1-223	ENST00000534442	SETD5	Q9C0A6	1442 aa		7.61	□□□□□ -1.19
ECHDC1-223	ENST00000534442	ELOA	Q14241	798 aa	Known RBP	7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	EZH2	Q15910	746 aa	Known RBP	7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	TSGA10IP	Q3SY00	556 aa		7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	SLFNL1	Q499Z3	407 aa		7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	SH3RF1	Q7Z6J0	888 aa		7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	BAP1	Q92560	729 aa		7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	GZF1	Q9H116	711 aa	Predicted RBP	7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	CCDC9	Q9Y3X0	531 aa	Known RBP	7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	GOLGA3	Q08378	1498 aa		7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	MYOM1	P52179	1685 aa		7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	ATP10D	Q9P241	1426 aa		7.6	□□□□□ -1.19
ECHDC1-223	ENST00000534442	PNPLA6	Q8IY17	1366 aa		7.59	□□□□□ -1.19
ECHDC1-223	ENST00000534442	TNRC18	O15417	2968 aa	Predicted RBP	7.59	□□□□□ -1.19
ECHDC1-223	ENST00000534442	S1PR4	O95977	384 aa		7.59	□□□□□ -1.19
ECHDC1-223	ENST00000534442	RNF135	Q8IUD6	432 aa		7.59	□□□□□ -1.19
ECHDC1-223	ENST00000534442	CDAN1	Q8IWY9	1227 aa		7.59	□□□□□ -1.19
ECHDC1-223	ENST00000534442	PLPP7	Q8NBV4	271 aa		7.59	□□□□□ -1.19
ECHDC1-223	ENST00000534442	STK32A	Q8WU08	396 aa		7.59	□□□□□ -1.19
ECHDC1-223	ENST00000534442	MAST1	Q9Y2H9	1570 aa		7.59	□□□□□ -1.2
ECHDC1-223	ENST00000534442	NLRP1	Q9C000	1473 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	KCNA1	Q09470	495 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	NCOA4	Q13772	614 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	CRTC2	Q53ET0	693 aa	Predicted RBP	7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	C4orf48	Q5BLP8	95 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	TRAF7	Q6Q0C0	670 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	ZBTB33	Q86T24	672 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	ZNF592	Q92610	1267 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	FOXJ1	Q92949	421 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	SYT17	Q9BSW7	474 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	MKRN1	Q9UHC7	482 aa	Known RBP	7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	GLI3	P10071	1580 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	WDR90	Q96KV7	1748 aa		7.58	□□□□□ -1.2
ECHDC1-223	ENST00000534442	HSPA1A	P0DMV8	641 aa	Known RBP	7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	HSPA1B	P0DMV9	641 aa	Known RBP	7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	LINC01559	Q495D7	138 aa		7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	TMEM164	Q5U3C3	297 aa		7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	CARD14	Q9BXL6	1004 aa		7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	NOVA2	Q9UNW9	492 aa	Known RBP	7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	FCF1	Q9Y324	198 aa	Known RBP	7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	DISP2	A7MBM2	1401 aa		7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	RGPD1	P0DJD0	1748 aa		7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	DLC1	Q96QB1	1528 aa		7.57	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP19	O94966	1318 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	MAGEB6P1	A0A0J9YX57	407 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	FAM196B	A6NMK8	535 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L15	C9J2P7	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L10	C9JJH3	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L13	C9JLJ4	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L12	C9JPN9	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L11	C9JVI0	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L21	D6R901	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L18	D6R9N7	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L22	D6RA61	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L17	D6RBQ6	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L19	D6RCP7	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L20	D6RJB6	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	DLL1	O00548	723 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	KCNA6	P17658	529 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	HTRA3	P83110	453 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	USP17L24	Q0WX57	530 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	PTK7	Q13308	1070 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	ERFE	Q4G0M1	354 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	EFCAB2	Q5VUJ9	269 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	DZIP3	Q86Y13	1208 aa	Known RBP	7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	ZNF511	Q8NB15	262 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	KIDINS220	Q9ULH0	1771 aa		7.56	□□□□□ -1.2
ECHDC1-223	ENST00000534442	NKTR	P30414	1462 aa	Known RBP	7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	KIF27	Q86VH2	1401 aa		7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	LZTS3	O60299	673 aa	Predicted RBP	7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	GPR162	Q16538	588 aa		7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	MAP7D1	Q3KQU3	841 aa		7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	GGT6	Q6P531	493 aa		7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	POTEG	Q6S5H5	508 aa		7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	KRT27	Q7Z3Y8	459 aa		7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	BPHL	Q86WA6	291 aa	Predicted RBP	7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	SEPT12	Q8IYM1	358 aa		7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	LRRC59	Q96AG4	307 aa	Known RBP	7.55	□□□□□ -1.2
ECHDC1-223	ENST00000534442	PITPNM2	Q9BZ72	1349 aa		7.54	□□□□□ -1.2
ECHDC1-223	ENST00000534442	PLEKHD1	A6NEE1	506 aa		7.54	□□□□□ -1.2
ECHDC1-223	ENST00000534442	PATL2	C9JE40	543 aa	Known RBP	7.54	□□□□□ -1.2
ECHDC1-223	ENST00000534442	PPEF1	O14829	653 aa	Predicted RBP	7.54	□□□□□ -1.2
ECHDC1-223	ENST00000534442	RASA1	P20936	1047 aa		7.54	□□□□□ -1.2

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