RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 NAA30Q147X3 362 aaPredicted RBP6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 ARID5BQ14865 1188 aa6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 NOM1Q5C9Z4 860 aaKnown RBP6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 NPAS4Q8IUM7 802 aa6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 TRMT44Q8IYL2 757 aaKnown RBP6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 KIAA1522Q9P206 1035 aaPredicted RBP6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 DNMT3AQ9Y6K1 912 aaPredicted RBP6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 EHBP1L1Q8N3D4 1523 aa6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 PHLDB1Q86UU1 1377 aa6.54□□□□□ -1.36
CYCSP28-201ENST00000534284 AKNAQ7Z591 1439 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 BACH1O14867 736 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 ST8SIA5O15466 376 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 PLA2G2CQ5R387 149 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 ZNF697Q5TEC3 545 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 TREML4Q6UXN2 200 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 ANKLE1Q8NAG6 615 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 GAS2L2Q8NHY3 880 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 CHMP7Q8WUX9 453 aaPredicted RBP6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 ZNF358Q9NW07 568 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 MTUS2Q5JR59 1369 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 SUPT6HQ7KZ85 1726 aaKnown RBP6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 GAPVD1Q14C86 1478 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 SNAPC4Q5SXM2 1469 aa6.53□□□□□ -1.36
CYCSP28-201ENST00000534284 HFM1A2PYH4 1435 aa6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 FAM187AA6NFU0 413 aa6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 ERVH48-1M5A8F1 160 aa6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 SCTRP47872 440 aa6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 AAMPQ13685 434 aa6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 INTS6LQ5JSJ4 861 aaKnown RBP6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 CAPN12Q6ZSI9 719 aa6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 TMC1Q8TDI8 760 aa6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 SCG3Q8WXD2 468 aaKnown RBP6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 ASB16Q96NS5 453 aa6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 AAASQ9NRG9 546 aa6.52□□□□□ -1.37
CYCSP28-201ENST00000534284 FHOD3Q2V2M9 1422 aa6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 MYOM3Q5VTT5 1437 aa6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 UACAQ9BZF9 1416 aa6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 FAM13AO94988 1023 aa6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 VARSP26640 1264 aaKnown RBP6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 FAM50AQ14320 339 aaKnown RBP6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 CC2D2BQ6DHV5 1058 aa6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 YTHDC1Q96MU7 727 aaKnown RBP6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 SERTAD1Q9UHV2 236 aa6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 DACH1Q9UI36 760 aa6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 GRIN2BQ13224 1484 aa6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 RAD54L2Q9Y4B4 1467 aa6.51□□□□□ -1.37
CYCSP28-201ENST00000534284 URB2Q14146 1524 aaKnown RBP6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 FOXO3O43524 673 aa6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 TCF3P15923 654 aa6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 IGFBP4P22692 258 aa6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 GDF10P55107 478 aa6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 TRIM32Q13049 653 aa6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 EAPPQ56P03 285 aaPredicted RBP6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 TNS4Q8IZW8 715 aa6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 HELQQ8TDG4 1101 aa6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 PURBQ96QR8 312 aaKnown RBP6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 CYLDQ9NQC7 956 aa6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 HECW1Q76N89 1606 aa6.5□□□□□ -1.37
CYCSP28-201ENST00000534284 ATAD2Q6PL18 1390 aa6.49□□□□□ -1.37
CYCSP28-201ENST00000534284 CCER2I3L3R5 266 aa6.49□□□□□ -1.37
CYCSP28-201ENST00000534284 NDUFB5O43674 189 aa6.49□□□□□ -1.37
CYCSP28-201ENST00000534284 DHX9Q08211 1270 aaKnown RBP6.49□□□□□ -1.37
CYCSP28-201ENST00000534284 EHBP1Q8NDI1 1231 aa6.49□□□□□ -1.37
CYCSP28-201ENST00000534284 COL26A1Q96A83 441 aa6.49□□□□□ -1.37
CYCSP28-201ENST00000534284 MAP4K5Q9Y4K4 846 aa6.49□□□□□ -1.37
CYCSP28-201ENST00000534284 MIA2Q96PC5 1412 aa6.49□□□□□ -1.37
CYCSP28-201ENST00000534284 TCOF1Q13428 1488 aaKnown RBP6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 TONSLQ96HA7 1378 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 TMEM229AB2RXF0 380 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 PPP1R12BO60237 982 aaPredicted RBP6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 STAU1O95793 577 aaKnown RBP6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 FSHRP23945 695 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 ITGAEP38570 1179 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 ERVK-9P63128 1117 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 ARHGAP4P98171 946 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 TMPRSS4Q9NRS4 437 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 PKD2L1Q9P0L9 805 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 BRPF3Q9ULD4 1205 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 ARHGEF11O15085 1522 aa6.48□□□□□ -1.37
CYCSP28-201ENST00000534284 NCOA2Q15596 1464 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 PTPN23Q9H3S7 1636 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 UGGT2Q9NYU1 1516 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 INHAP05111 366 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 WNT7BP56706 349 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 TAGLNQ01995 201 aaKnown RBP6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 RGL4Q8IZJ4 473 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 TSPAN10Q9H1Z9 355 aaPredicted RBP6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 OSBPL3Q9H4L5 887 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 IGSF5Q9NSI5 407 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 CHMP3Q9Y3E7 222 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 IQGAP2Q13576 1575 aa6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 TARBP1Q13395 1621 aaKnown RBP6.47□□□□□ -1.37
CYCSP28-201ENST00000534284 GCC2Q8IWJ2 1684 aa6.46□□□□□ -1.37
CYCSP28-201ENST00000534284 MPSTP25325 297 aa6.46□□□□□ -1.38
CYCSP28-201ENST00000534284 SCNN1DP51172 638 aa6.46□□□□□ -1.38
CYCSP28-201ENST00000534284 TSNAXIP1Q2TAA8 658 aa6.46□□□□□ -1.38
CYCSP28-201ENST00000534284 ESCO1Q5FWF5 840 aa6.46□□□□□ -1.38
CYCSP28-201ENST00000534284 C16orf46Q6P387 395 aa6.46□□□□□ -1.38
CYCSP28-201ENST00000534284 CYP2U1Q7Z449 544 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms