RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 SIPA1L3O60292 1781 aaPredicted RBP17.58■□□□□ 0.4
CMTM1-219ENST00000533953 TJP1Q07157 1748 aa17.58■□□□□ 0.4
CMTM1-219ENST00000533953 STARD3NLO95772 234 aa17.57■□□□□ 0.4
CMTM1-219ENST00000533953 EIF4A1P60842 406 aaKnown RBP17.57■□□□□ 0.4
CMTM1-219ENST00000533953 SNRPA1P09661 255 aaKnown RBP17.56■□□□□ 0.4
CMTM1-219ENST00000533953 RFC4P35249 363 aa17.56■□□□□ 0.4
CMTM1-219ENST00000533953 ARXQ96QS3 562 aa17.56■□□□□ 0.4
CMTM1-219ENST00000533953 ZNF330Q9Y3S2 320 aaPredicted RBP17.56■□□□□ 0.4
CMTM1-219ENST00000533953 MYH14Q7Z406 1995 aaKnown RBP17.55■□□□□ 0.4
CMTM1-219ENST00000533953 SOS1Q07889 1333 aaPredicted RBP17.55■□□□□ 0.4
CMTM1-219ENST00000533953 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
CMTM1-219ENST00000533953 DIEXFQ68CQ4 756 aaKnown RBP17.55■□□□□ 0.4
CMTM1-219ENST00000533953 KLHL34Q8N239 644 aa17.55■□□□□ 0.4
CMTM1-219ENST00000533953 LRP5O75197 1615 aa17.54■□□□□ 0.4
CMTM1-219ENST00000533953 POLD1P28340 1107 aa17.54■□□□□ 0.4
CMTM1-219ENST00000533953 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
CMTM1-219ENST00000533953 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
CMTM1-219ENST00000533953 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
CMTM1-219ENST00000533953 UBR2Q8IWV8 1755 aa17.53■□□□□ 0.4
CMTM1-219ENST00000533953 COL5A3P25940 1745 aaPredicted RBP17.53■□□□□ 0.4
CMTM1-219ENST00000533953 CHL1O00533 1208 aa17.53■□□□□ 0.4
CMTM1-219ENST00000533953 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
CMTM1-219ENST00000533953 GYS1P13807 737 aa17.53■□□□□ 0.4
CMTM1-219ENST00000533953 MIER1Q8N108 512 aa17.53■□□□□ 0.4
CMTM1-219ENST00000533953 FHDC1Q9C0D6 1143 aaPredicted RBP17.53■□□□□ 0.4
CMTM1-219ENST00000533953 NBPF26B4DH59 902 aa17.52■□□□□ 0.4
CMTM1-219ENST00000533953 ADRA2BP18089 450 aa17.52■□□□□ 0.4
CMTM1-219ENST00000533953 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.4
CMTM1-219ENST00000533953 FKBP8Q14318 412 aa17.52■□□□□ 0.4
CMTM1-219ENST00000533953 USPL1Q5W0Q7 1092 aa17.52■□□□□ 0.4
CMTM1-219ENST00000533953 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.4
CMTM1-219ENST00000533953 NBPF15Q8N660 670 aa17.52■□□□□ 0.4
CMTM1-219ENST00000533953 TBC1D2BQ9UPU7 963 aa17.52■□□□□ 0.4
CMTM1-219ENST00000533953 QSER1Q2KHR3 1735 aa17.51■□□□□ 0.39
CMTM1-219ENST00000533953 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
CMTM1-219ENST00000533953 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
CMTM1-219ENST00000533953 MMP10P09238 476 aa17.5■□□□□ 0.39
CMTM1-219ENST00000533953 EIF2S2P20042 333 aaKnown RBP17.5■□□□□ 0.39
CMTM1-219ENST00000533953 NGEFQ8N5V2 710 aa17.5■□□□□ 0.39
CMTM1-219ENST00000533953 SYT17Q9BSW7 474 aa17.5■□□□□ 0.39
CMTM1-219ENST00000533953 BCL2L12Q9HB09 334 aa17.5■□□□□ 0.39
CMTM1-219ENST00000533953 MBIPQ9NS73 344 aa17.5■□□□□ 0.39
CMTM1-219ENST00000533953 COL15A1P39059 1388 aa17.5■□□□□ 0.39
CMTM1-219ENST00000533953 ZPR1O75312 459 aa17.49■□□□□ 0.39
CMTM1-219ENST00000533953 WWC1Q8IX03 1113 aa17.49■□□□□ 0.39
CMTM1-219ENST00000533953 ZNF853P0CG23 659 aa17.48■□□□□ 0.39
CMTM1-219ENST00000533953 NLGN1Q8N2Q7 840 aa17.48■□□□□ 0.39
CMTM1-219ENST00000533953 CFAP44Q96MT7 982 aa17.48■□□□□ 0.39
CMTM1-219ENST00000533953 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
CMTM1-219ENST00000533953 CICQ96RK0 1608 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-219ENST00000533953 ELL2O00472 640 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-219ENST00000533953 ANXA1P04083 346 aa17.47■□□□□ 0.39
CMTM1-219ENST00000533953 MYL6BP14649 208 aa17.47■□□□□ 0.39
CMTM1-219ENST00000533953 IL6STP40189 918 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-219ENST00000533953 NLGN2Q8NFZ4 835 aa17.47■□□□□ 0.39
CMTM1-219ENST00000533953 BABAM1Q9NWV8 329 aa17.47■□□□□ 0.39
CMTM1-219ENST00000533953 DDR1Q08345 913 aa17.46■□□□□ 0.39
CMTM1-219ENST00000533953 BICDL1Q6ZP65 573 aa17.46■□□□□ 0.39
CMTM1-219ENST00000533953 TSR2Q969E8 191 aaKnown RBP17.46■□□□□ 0.39
CMTM1-219ENST00000533953 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
CMTM1-219ENST00000533953 CCER2I3L3R5 266 aa17.45■□□□□ 0.38
CMTM1-219ENST00000533953 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
CMTM1-219ENST00000533953 DZIP3Q86Y13 1208 aaKnown RBP17.45■□□□□ 0.38
CMTM1-219ENST00000533953 IFT57Q9NWB7 429 aa17.45■□□□□ 0.38
CMTM1-219ENST00000533953 A0A087WZG4 1122 aa17.44■□□□□ 0.38
CMTM1-219ENST00000533953 CAMTA2O94983 1202 aa17.44■□□□□ 0.38
CMTM1-219ENST00000533953 TM4SF1P30408 202 aa17.44■□□□□ 0.38
CMTM1-219ENST00000533953 GNAI1P63096 354 aa17.44■□□□□ 0.38
CMTM1-219ENST00000533953 NFIXQ14938 502 aa17.44■□□□□ 0.38
CMTM1-219ENST00000533953 CCDC27Q2M243 656 aa17.44■□□□□ 0.38
CMTM1-219ENST00000533953 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
CMTM1-219ENST00000533953 PDIA6Q15084 440 aa17.43■□□□□ 0.38
CMTM1-219ENST00000533953 DUSP27Q5VZP5 1158 aa17.43■□□□□ 0.38
CMTM1-219ENST00000533953 TBC1D9BQ66K14 1250 aa17.43■□□□□ 0.38
CMTM1-219ENST00000533953 TTLL7Q6ZT98 887 aa17.43■□□□□ 0.38
CMTM1-219ENST00000533953 NPM2Q86SE8 214 aaKnown RBP17.43■□□□□ 0.38
CMTM1-219ENST00000533953 C8orf58Q8NAV2 365 aa17.43■□□□□ 0.38
CMTM1-219ENST00000533953 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
CMTM1-219ENST00000533953 PARP3Q9Y6F1 533 aa17.43■□□□□ 0.38
CMTM1-219ENST00000533953 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
CMTM1-219ENST00000533953 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
CMTM1-219ENST00000533953 C4AP0C0L4 1744 aa17.41■□□□□ 0.38
CMTM1-219ENST00000533953 POLRMTO00411 1230 aaKnown RBP17.41■□□□□ 0.38
CMTM1-219ENST00000533953 HLFQ16534 295 aa17.41■□□□□ 0.38
CMTM1-219ENST00000533953 CCDC24Q8N4L8 307 aa17.41■□□□□ 0.38
CMTM1-219ENST00000533953 COL24A1Q17RW2 1714 aa17.4■□□□□ 0.38
CMTM1-219ENST00000533953 TCERG1O14776 1098 aaKnown RBP17.39■□□□□ 0.37
CMTM1-219ENST00000533953 LRP10Q7Z4F1 713 aa17.39■□□□□ 0.37
CMTM1-219ENST00000533953 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
CMTM1-219ENST00000533953 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
CMTM1-219ENST00000533953 SERPINB2P05120 415 aa17.38■□□□□ 0.37
CMTM1-219ENST00000533953 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
CMTM1-219ENST00000533953 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
CMTM1-219ENST00000533953 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
CMTM1-219ENST00000533953 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
CMTM1-219ENST00000533953 A0A0G2JLW4 131 aa17.37■□□□□ 0.37
CMTM1-219ENST00000533953 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
CMTM1-219ENST00000533953 WDR63Q8IWG1 891 aa17.37■□□□□ 0.37
CMTM1-219ENST00000533953 FAM177BA6PVY3 158 aa17.36■□□□□ 0.37
CMTM1-219ENST00000533953 COPS6Q7L5N1 327 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms