RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
PACSIN3-210ENST00000533686 E9PSI1 815 aa21.34■■□□□ 1.01
PACSIN3-210ENST00000533686 RPS6KA4O75676 772 aa21.34■■□□□ 1.01
PACSIN3-210ENST00000533686 R3HDM1Q15032 1099 aaKnown RBP21.34■■□□□ 1.01
PACSIN3-210ENST00000533686 FLAD1Q8NFF5 587 aa21.34■■□□□ 1.01
PACSIN3-210ENST00000533686 TSR2Q969E8 191 aaKnown RBP21.34■■□□□ 1.01
PACSIN3-210ENST00000533686 FANCIQ9NVI1 1328 aa21.33■■□□□ 1.01
PACSIN3-210ENST00000533686 GNPATO15228 680 aa21.33■■□□□ 1.01
PACSIN3-210ENST00000533686 SSFA2P28290 1259 aa21.33■■□□□ 1.01
PACSIN3-210ENST00000533686 RTCBQ9Y3I0 505 aaKnown RBP21.33■■□□□ 1.01
PACSIN3-210ENST00000533686 SOS1Q07889 1333 aaPredicted RBP21.32■■□□□ 1
PACSIN3-210ENST00000533686 SLFN5Q08AF3 891 aa21.32■■□□□ 1
PACSIN3-210ENST00000533686 KRT24Q2M2I5 525 aa21.32■■□□□ 1
PACSIN3-210ENST00000533686 PNPLA7Q6ZV29 1317 aa21.31■■□□□ 1
PACSIN3-210ENST00000533686 ADRA2BP18089 450 aa21.31■■□□□ 1
PACSIN3-210ENST00000533686 DUSP27Q5VZP5 1158 aa21.31■■□□□ 1
PACSIN3-210ENST00000533686 ZBTB1Q9Y2K1 713 aa21.31■■□□□ 1
PACSIN3-210ENST00000533686 PSDA5PKW4 1024 aaPredicted RBP21.3■■□□□ 1
PACSIN3-210ENST00000533686 A1BGP04217 495 aa21.3■■□□□ 1
PACSIN3-210ENST00000533686 C8orf58Q8NAV2 365 aa21.3■■□□□ 1
PACSIN3-210ENST00000533686 ERBB4Q15303 1308 aa21.29■■□□□ 1
PACSIN3-210ENST00000533686 ZBED9Q6R2W3 1325 aa21.29■■□□□ 1
PACSIN3-210ENST00000533686 MYH14Q7Z406 1995 aaKnown RBP21.29■■□□□ 1
PACSIN3-210ENST00000533686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.29■■□□□ 1
PACSIN3-210ENST00000533686 IL6STP40189 918 aaPredicted RBP21.29■■□□□ 1
PACSIN3-210ENST00000533686 TRAPPC3LQ5T215 181 aa21.29■■□□□ 1
PACSIN3-210ENST00000533686 AMIGO3Q86WK7 504 aa21.29■■□□□ 1
PACSIN3-210ENST00000533686 TRMT2AQ8IZ69 625 aaKnown RBP21.29■■□□□ 1
PACSIN3-210ENST00000533686 CHMP4AQ9BY43 222 aa21.29■■□□□ 1
PACSIN3-210ENST00000533686 CANXP27824 592 aaKnown RBP21.28■■□□□ 1
PACSIN3-210ENST00000533686 EIF5P55010 431 aaKnown RBP21.28■■□□□ 1
PACSIN3-210ENST00000533686 COL23A1Q86Y22 540 aaPredicted RBP21.28■■□□□ 1
PACSIN3-210ENST00000533686 CDCA7LQ96GN5 454 aa21.28■■□□□ 1
PACSIN3-210ENST00000533686 QSER1Q2KHR3 1735 aa21.27■■□□□ 1
PACSIN3-210ENST00000533686 EIF2S2P20042 333 aaKnown RBP21.27■■□□□ 1
PACSIN3-210ENST00000533686 UBR3Q6ZT12 1888 aa21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 LAMB4A4D0S4 1761 aa21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 NBPF26B4DH59 902 aa21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 ELL2O00472 640 aaPredicted RBP21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 PHF14O94880 888 aa21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 EXOSC9Q06265 439 aaKnown RBP21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 TWISTNBQ3B726 338 aaPredicted RBP21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 HDGFL1Q5TGJ6 251 aa21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 NBPF10Q6P3W6 841 aaKnown RBP21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 NBPF15Q8N660 670 aa21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 TSPYL6Q8N831 410 aa21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 SLC16A10Q8TF71 515 aa21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 ARHGEF1Q92888 912 aaKnown RBP21.26■□□□□ 0.99
PACSIN3-210ENST00000533686 A0A087WZG4 1122 aa21.25■□□□□ 0.99
PACSIN3-210ENST00000533686 SMIM5Q71RC9 77 aa21.25■□□□□ 0.99
PACSIN3-210ENST00000533686 PDGFDQ9GZP0 370 aaPredicted RBP21.24■□□□□ 0.99
PACSIN3-210ENST00000533686 COL15A1P39059 1388 aa21.23■□□□□ 0.99
PACSIN3-210ENST00000533686 TUBGCP6Q96RT7 1819 aa21.23■□□□□ 0.99
PACSIN3-210ENST00000533686 VAMP4O75379 141 aa21.23■□□□□ 0.99
PACSIN3-210ENST00000533686 RFC4P35249 363 aa21.23■□□□□ 0.99
PACSIN3-210ENST00000533686 PDIA6Q15084 440 aa21.23■□□□□ 0.99
PACSIN3-210ENST00000533686 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
PACSIN3-210ENST00000533686 MSH5O43196 834 aa21.22■□□□□ 0.99
PACSIN3-210ENST00000533686 PIP4K2AP48426 406 aaPredicted RBP21.22■□□□□ 0.99
PACSIN3-210ENST00000533686 CCDC30Q5VVM6 783 aa21.22■□□□□ 0.99
PACSIN3-210ENST00000533686 DDX21Q9NR30 783 aaKnown RBP eCLIP21.22■□□□□ 0.99
PACSIN3-210ENST00000533686 DBF4Q9UBU7 674 aaPredicted RBP21.22■□□□□ 0.99
PACSIN3-210ENST00000533686 LRP10Q7Z4F1 713 aa21.21■□□□□ 0.99
PACSIN3-210ENST00000533686 NECTIN2Q92692 538 aa21.21■□□□□ 0.99
PACSIN3-210ENST00000533686 CASZ1Q86V15 1759 aa21.2■□□□□ 0.99
PACSIN3-210ENST00000533686 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
PACSIN3-210ENST00000533686 NARFQ9UHQ1 456 aa21.2■□□□□ 0.98
PACSIN3-210ENST00000533686 MYL6BP14649 208 aa21.19■□□□□ 0.98
PACSIN3-210ENST00000533686 CHPF2Q9P2E5 772 aa21.19■□□□□ 0.98
PACSIN3-210ENST00000533686 ZNF330Q9Y3S2 320 aaPredicted RBP21.19■□□□□ 0.98
PACSIN3-210ENST00000533686 USP42Q9H9J4 1324 aaKnown RBP21.19■□□□□ 0.98
PACSIN3-210ENST00000533686 ZPR1O75312 459 aa21.18■□□□□ 0.98
PACSIN3-210ENST00000533686 CT47B1P0C2W7 299 aaPredicted RBP21.18■□□□□ 0.98
PACSIN3-210ENST00000533686 PROSER3Q2NL68 480 aa21.18■□□□□ 0.98
PACSIN3-210ENST00000533686 HYPKQ9NX55 129 aa21.18■□□□□ 0.98
PACSIN3-210ENST00000533686 RGL2O15211 777 aa21.17■□□□□ 0.98
PACSIN3-210ENST00000533686 DZIP3Q86Y13 1208 aaKnown RBP21.17■□□□□ 0.98
PACSIN3-210ENST00000533686 ZNF428Q96B54 188 aa21.17■□□□□ 0.98
PACSIN3-210ENST00000533686 TBC1D2BQ9UPU7 963 aa21.17■□□□□ 0.98
PACSIN3-210ENST00000533686 ZBTB7AO95365 584 aa21.16■□□□□ 0.98
PACSIN3-210ENST00000533686 ANXA1P04083 346 aa21.16■□□□□ 0.98
PACSIN3-210ENST00000533686 GYS1P13807 737 aa21.16■□□□□ 0.98
PACSIN3-210ENST00000533686 NLGN1Q8N2Q7 840 aa21.16■□□□□ 0.98
PACSIN3-210ENST00000533686 STK31Q9BXU1 1019 aa21.16■□□□□ 0.98
PACSIN3-210ENST00000533686 SRP68Q9UHB9 627 aaKnown RBP21.16■□□□□ 0.98
PACSIN3-210ENST00000533686 CAMTA2O94983 1202 aa21.15■□□□□ 0.98
PACSIN3-210ENST00000533686 USPL1Q5W0Q7 1092 aa21.15■□□□□ 0.98
PACSIN3-210ENST00000533686 SPON1Q9HCB6 807 aa21.15■□□□□ 0.98
PACSIN3-210ENST00000533686 ERVV-1B6SEH8 477 aa21.14■□□□□ 0.97
PACSIN3-210ENST00000533686 COPS6Q7L5N1 327 aa21.14■□□□□ 0.97
PACSIN3-210ENST00000533686 ARXQ96QS3 562 aa21.14■□□□□ 0.97
PACSIN3-210ENST00000533686 C4AP0C0L4 1744 aa21.13■□□□□ 0.97
PACSIN3-210ENST00000533686 CLEC4GQ6UXB4 293 aa21.13■□□□□ 0.97
PACSIN3-210ENST00000533686 KIF6Q6ZMV9 814 aa21.13■□□□□ 0.97
PACSIN3-210ENST00000533686 TTLL7Q6ZT98 887 aa21.13■□□□□ 0.97
PACSIN3-210ENST00000533686 XAGE3Q8WTP9 111 aa21.13■□□□□ 0.97
PACSIN3-210ENST00000533686 BCL2L12Q9HB09 334 aa21.13■□□□□ 0.97
PACSIN3-210ENST00000533686 ATF5Q9Y2D1 282 aaPredicted RBP21.13■□□□□ 0.97
PACSIN3-210ENST00000533686 MAP3K15Q6ZN16 1313 aa21.12■□□□□ 0.97
PACSIN3-210ENST00000533686 SLC4A2P04920 1241 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms