RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 NBPF14Q5TI25 921 aa16.54■□□□□ 0.24
RPUSD4-208ENST00000533628 CRKLP46109 303 aaKnown RBP16.54■□□□□ 0.24
RPUSD4-208ENST00000533628 GOLGA2Q08379 1002 aa16.54■□□□□ 0.24
RPUSD4-208ENST00000533628 AMIGO3Q86WK7 504 aa16.54■□□□□ 0.24
RPUSD4-208ENST00000533628 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
RPUSD4-208ENST00000533628 TUBGCP6Q96RT7 1819 aa16.53■□□□□ 0.24
RPUSD4-208ENST00000533628 LAMB4A4D0S4 1761 aa16.53■□□□□ 0.24
RPUSD4-208ENST00000533628 SLFN5Q08AF3 891 aa16.53■□□□□ 0.24
RPUSD4-208ENST00000533628 TRMT2AQ8IZ69 625 aaKnown RBP16.53■□□□□ 0.24
RPUSD4-208ENST00000533628 STK32BQ9NY57 414 aa16.53■□□□□ 0.24
RPUSD4-208ENST00000533628 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.24
RPUSD4-208ENST00000533628 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.24
RPUSD4-208ENST00000533628 QSER1Q2KHR3 1735 aa16.52■□□□□ 0.24
RPUSD4-208ENST00000533628 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.24
RPUSD4-208ENST00000533628 STARD3NLO95772 234 aa16.51■□□□□ 0.23
RPUSD4-208ENST00000533628 CCDC87Q9NVE4 849 aa16.51■□□□□ 0.23
RPUSD4-208ENST00000533628 E9PSI1 815 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 SMIM5Q71RC9 77 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 ZBED9Q6R2W3 1325 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 RPS6KA4O75676 772 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 A1BGP04217 495 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 HOXB7P09629 217 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 R3HDM1Q15032 1099 aaKnown RBP16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 TSPYL6Q8N831 410 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 AK7Q96M32 723 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 MYH16Q9H6N6 1097 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 ZBTB1Q9Y2K1 713 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
RPUSD4-208ENST00000533628 NBPF26B4DH59 902 aa16.49■□□□□ 0.23
RPUSD4-208ENST00000533628 GNPATO15228 680 aa16.49■□□□□ 0.23
RPUSD4-208ENST00000533628 NBPF10Q6P3W6 841 aaKnown RBP16.49■□□□□ 0.23
RPUSD4-208ENST00000533628 NBPF15Q8N660 670 aa16.49■□□□□ 0.23
RPUSD4-208ENST00000533628 TFCP2L1Q9NZI6 479 aa16.49■□□□□ 0.23
RPUSD4-208ENST00000533628 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
RPUSD4-208ENST00000533628 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
RPUSD4-208ENST00000533628 CASZ1Q86V15 1759 aa16.48■□□□□ 0.23
RPUSD4-208ENST00000533628 PSDA5PKW4 1024 aaPredicted RBP16.47■□□□□ 0.23
RPUSD4-208ENST00000533628 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
RPUSD4-208ENST00000533628 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
RPUSD4-208ENST00000533628 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
RPUSD4-208ENST00000533628 SSFA2P28290 1259 aa16.47■□□□□ 0.23
RPUSD4-208ENST00000533628 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
RPUSD4-208ENST00000533628 PDIA6Q15084 440 aa16.47■□□□□ 0.23
RPUSD4-208ENST00000533628 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
RPUSD4-208ENST00000533628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
RPUSD4-208ENST00000533628 CANXP27824 592 aaKnown RBP16.46■□□□□ 0.23
RPUSD4-208ENST00000533628 LRP10Q7Z4F1 713 aa16.46■□□□□ 0.23
RPUSD4-208ENST00000533628 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.22
RPUSD4-208ENST00000533628 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.22
RPUSD4-208ENST00000533628 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.22
RPUSD4-208ENST00000533628 ERBB4Q15303 1308 aa16.46■□□□□ 0.22
RPUSD4-208ENST00000533628 VAMP4O75379 141 aa16.45■□□□□ 0.22
RPUSD4-208ENST00000533628 TWISTNBQ3B726 338 aaPredicted RBP16.45■□□□□ 0.22
RPUSD4-208ENST00000533628 ARHGEF1Q92888 912 aaKnown RBP16.45■□□□□ 0.22
RPUSD4-208ENST00000533628 ADRA2BP18089 450 aa16.44■□□□□ 0.22
RPUSD4-208ENST00000533628 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
RPUSD4-208ENST00000533628 PHF14O94880 888 aa16.44■□□□□ 0.22
RPUSD4-208ENST00000533628 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
RPUSD4-208ENST00000533628 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
RPUSD4-208ENST00000533628 C4AP0C0L4 1744 aa16.44■□□□□ 0.22
RPUSD4-208ENST00000533628 PROSER3Q2NL68 480 aa16.43■□□□□ 0.22
RPUSD4-208ENST00000533628 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
RPUSD4-208ENST00000533628 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
RPUSD4-208ENST00000533628 COL15A1P39059 1388 aa16.43■□□□□ 0.22
RPUSD4-208ENST00000533628 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
RPUSD4-208ENST00000533628 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
RPUSD4-208ENST00000533628 ANXA1P04083 346 aa16.41■□□□□ 0.22
RPUSD4-208ENST00000533628 MYL6BP14649 208 aa16.4■□□□□ 0.22
RPUSD4-208ENST00000533628 DBF4Q9UBU7 674 aaPredicted RBP16.4■□□□□ 0.22
RPUSD4-208ENST00000533628 USP42Q9H9J4 1324 aaKnown RBP16.4■□□□□ 0.22
RPUSD4-208ENST00000533628 COL24A1Q17RW2 1714 aa16.4■□□□□ 0.22
RPUSD4-208ENST00000533628 CCDC30Q5VVM6 783 aa16.39■□□□□ 0.21
RPUSD4-208ENST00000533628 SLC16A10Q8TF71 515 aa16.39■□□□□ 0.21
RPUSD4-208ENST00000533628 SRP68Q9UHB9 627 aaKnown RBP16.39■□□□□ 0.21
RPUSD4-208ENST00000533628 NARFQ9UHQ1 456 aa16.39■□□□□ 0.21
RPUSD4-208ENST00000533628 A0A087WZG4 1122 aa16.39■□□□□ 0.21
RPUSD4-208ENST00000533628 BCL2L12Q9HB09 334 aa16.39■□□□□ 0.21
RPUSD4-208ENST00000533628 RFC4P35249 363 aa16.38■□□□□ 0.21
RPUSD4-208ENST00000533628 TBC1D2BQ9UPU7 963 aa16.38■□□□□ 0.21
RPUSD4-208ENST00000533628 CAMTA2O94983 1202 aa16.38■□□□□ 0.21
RPUSD4-208ENST00000533628 GYS1P13807 737 aa16.38■□□□□ 0.21
RPUSD4-208ENST00000533628 TTLL7Q6ZT98 887 aa16.38■□□□□ 0.21
RPUSD4-208ENST00000533628 CHMP4AQ9BY43 222 aa16.38■□□□□ 0.21
RPUSD4-208ENST00000533628 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
RPUSD4-208ENST00000533628 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
RPUSD4-208ENST00000533628 MSH5O43196 834 aa16.37■□□□□ 0.21
RPUSD4-208ENST00000533628 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
RPUSD4-208ENST00000533628 BCORQ6W2J9 1755 aa16.37■□□□□ 0.21
RPUSD4-208ENST00000533628 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
RPUSD4-208ENST00000533628 ZBTB7AO95365 584 aa16.36■□□□□ 0.21
RPUSD4-208ENST00000533628 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
RPUSD4-208ENST00000533628 YTHDC1Q96MU7 727 aaKnown RBP16.36■□□□□ 0.21
RPUSD4-208ENST00000533628 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
RPUSD4-208ENST00000533628 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
RPUSD4-208ENST00000533628 COPS6Q7L5N1 327 aa16.36■□□□□ 0.21
RPUSD4-208ENST00000533628 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
RPUSD4-208ENST00000533628 MTFR1LQ9H019 292 aa16.36■□□□□ 0.21
RPUSD4-208ENST00000533628 SGIP1Q9BQI5 828 aa16.35■□□□□ 0.21
RPUSD4-208ENST00000533628 PHAXQ9H814 394 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms