RNA–Protein interactions for RNA: ENST00000533332.1

SYT13-203, Transcript of synaptotagmin 13, humanhuman

TSL 1 (best)

Gene SYT13, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT13-203ENST00000533332 CHMP4AQ9BY43 222 aa20.24■□□□□ 0.83
SYT13-203ENST00000533332 MYH16Q9H6N6 1097 aa20.24■□□□□ 0.83
SYT13-203ENST00000533332 SOS1Q07889 1333 aaPredicted RBP20.24■□□□□ 0.83
SYT13-203ENST00000533332 RPS6KA4O75676 772 aa20.24■□□□□ 0.83
SYT13-203ENST00000533332 SSFA2P28290 1259 aa20.24■□□□□ 0.83
SYT13-203ENST00000533332 R3HDM1Q15032 1099 aaKnown RBP20.24■□□□□ 0.83
SYT13-203ENST00000533332 INTS5Q6P9B9 1019 aaKnown RBP20.24■□□□□ 0.83
SYT13-203ENST00000533332 CCDC87Q9NVE4 849 aa20.24■□□□□ 0.83
SYT13-203ENST00000533332 RTCBQ9Y3I0 505 aaKnown RBP20.24■□□□□ 0.83
SYT13-203ENST00000533332 ADRA2BP18089 450 aa20.23■□□□□ 0.83
SYT13-203ENST00000533332 TJP1Q07157 1748 aa20.23■□□□□ 0.83
SYT13-203ENST00000533332 ZBED9Q6R2W3 1325 aa20.23■□□□□ 0.83
SYT13-203ENST00000533332 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
SYT13-203ENST00000533332 E9PSI1 815 aa20.22■□□□□ 0.83
SYT13-203ENST00000533332 GNPATO15228 680 aa20.22■□□□□ 0.83
SYT13-203ENST00000533332 PRAMEF22A3QJZ6 481 aa20.22■□□□□ 0.83
SYT13-203ENST00000533332 TRAPPC3LQ5T215 181 aa20.21■□□□□ 0.83
SYT13-203ENST00000533332 TUBGCP6Q96RT7 1819 aa20.2■□□□□ 0.82
SYT13-203ENST00000533332 SLC16A10Q8TF71 515 aa20.2■□□□□ 0.82
SYT13-203ENST00000533332 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
SYT13-203ENST00000533332 ERBB4Q15303 1308 aa20.2■□□□□ 0.82
SYT13-203ENST00000533332 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
SYT13-203ENST00000533332 TSR2Q969E8 191 aaKnown RBP20.19■□□□□ 0.82
SYT13-203ENST00000533332 PNPLA7Q6ZV29 1317 aa20.19■□□□□ 0.82
SYT13-203ENST00000533332 FANCIQ9NVI1 1328 aa20.19■□□□□ 0.82
SYT13-203ENST00000533332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
SYT13-203ENST00000533332 SLFN5Q08AF3 891 aa20.19■□□□□ 0.82
SYT13-203ENST00000533332 DUSP27Q5VZP5 1158 aa20.19■□□□□ 0.82
SYT13-203ENST00000533332 ZBTB1Q9Y2K1 713 aa20.19■□□□□ 0.82
SYT13-203ENST00000533332 PSDA5PKW4 1024 aaPredicted RBP20.18■□□□□ 0.82
SYT13-203ENST00000533332 A1BGP04217 495 aa20.18■□□□□ 0.82
SYT13-203ENST00000533332 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
SYT13-203ENST00000533332 NPM2Q86SE8 214 aaKnown RBP20.17■□□□□ 0.82
SYT13-203ENST00000533332 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
SYT13-203ENST00000533332 TRMT2AQ8IZ69 625 aaKnown RBP20.17■□□□□ 0.82
SYT13-203ENST00000533332 C8orf58Q8NAV2 365 aa20.17■□□□□ 0.82
SYT13-203ENST00000533332 QSER1Q2KHR3 1735 aa20.17■□□□□ 0.82
SYT13-203ENST00000533332 CANXP27824 592 aaKnown RBP20.16■□□□□ 0.82
SYT13-203ENST00000533332 KRT24Q2M2I5 525 aa20.16■□□□□ 0.82
SYT13-203ENST00000533332 ARHGEF1Q92888 912 aaKnown RBP20.16■□□□□ 0.82
SYT13-203ENST00000533332 A0A087WZG4 1122 aa20.16■□□□□ 0.82
SYT13-203ENST00000533332 EIF2S2P20042 333 aaKnown RBP20.16■□□□□ 0.82
SYT13-203ENST00000533332 AMIGO3Q86WK7 504 aa20.16■□□□□ 0.82
SYT13-203ENST00000533332 MYH14Q7Z406 1995 aaKnown RBP20.16■□□□□ 0.82
SYT13-203ENST00000533332 PHF14O94880 888 aa20.15■□□□□ 0.82
SYT13-203ENST00000533332 RFC4P35249 363 aa20.15■□□□□ 0.82
SYT13-203ENST00000533332 NBPF26B4DH59 902 aa20.14■□□□□ 0.81
SYT13-203ENST00000533332 TWISTNBQ3B726 338 aaPredicted RBP20.14■□□□□ 0.81
SYT13-203ENST00000533332 HDGFL1Q5TGJ6 251 aa20.14■□□□□ 0.81
SYT13-203ENST00000533332 NBPF10Q6P3W6 841 aaKnown RBP20.14■□□□□ 0.81
SYT13-203ENST00000533332 NBPF15Q8N660 670 aa20.14■□□□□ 0.81
SYT13-203ENST00000533332 UBR3Q6ZT12 1888 aa20.14■□□□□ 0.81
SYT13-203ENST00000533332 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
SYT13-203ENST00000533332 DBF4Q9UBU7 674 aaPredicted RBP20.13■□□□□ 0.81
SYT13-203ENST00000533332 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
SYT13-203ENST00000533332 NEFLP07196 543 aa20.13■□□□□ 0.81
SYT13-203ENST00000533332 EXOSC9Q06265 439 aaKnown RBP20.13■□□□□ 0.81
SYT13-203ENST00000533332 CCDC30Q5VVM6 783 aa20.13■□□□□ 0.81
SYT13-203ENST00000533332 TSPYL6Q8N831 410 aa20.13■□□□□ 0.81
SYT13-203ENST00000533332 CDCA7LQ96GN5 454 aa20.13■□□□□ 0.81
SYT13-203ENST00000533332 MSH5O43196 834 aa20.12■□□□□ 0.81
SYT13-203ENST00000533332 PDGFDQ9GZP0 370 aaPredicted RBP20.12■□□□□ 0.81
SYT13-203ENST00000533332 MTFR1LQ9H019 292 aa20.12■□□□□ 0.81
SYT13-203ENST00000533332 DDX21Q9NR30 783 aaKnown RBP eCLIP20.12■□□□□ 0.81
SYT13-203ENST00000533332 COL15A1P39059 1388 aa20.12■□□□□ 0.81
SYT13-203ENST00000533332 VAMP4O75379 141 aa20.11■□□□□ 0.81
SYT13-203ENST00000533332 PDIA6Q15084 440 aa20.11■□□□□ 0.81
SYT13-203ENST00000533332 NARFQ9UHQ1 456 aa20.11■□□□□ 0.81
SYT13-203ENST00000533332 RGL2O15211 777 aa20.1■□□□□ 0.81
SYT13-203ENST00000533332 ZPR1O75312 459 aa20.1■□□□□ 0.81
SYT13-203ENST00000533332 SMIM5Q71RC9 77 aa20.1■□□□□ 0.81
SYT13-203ENST00000533332 NLGN1Q8N2Q7 840 aa20.1■□□□□ 0.81
SYT13-203ENST00000533332 ZNF428Q96B54 188 aa20.1■□□□□ 0.81
SYT13-203ENST00000533332 USP42Q9H9J4 1324 aaKnown RBP20.09■□□□□ 0.81
SYT13-203ENST00000533332 CT47B1P0C2W7 299 aaPredicted RBP20.09■□□□□ 0.81
SYT13-203ENST00000533332 LRP10Q7Z4F1 713 aa20.09■□□□□ 0.81
SYT13-203ENST00000533332 HYPKQ9NX55 129 aa20.09■□□□□ 0.81
SYT13-203ENST00000533332 CASZ1Q86V15 1759 aa20.08■□□□□ 0.81
SYT13-203ENST00000533332 MYL6BP14649 208 aa20.07■□□□□ 0.8
SYT13-203ENST00000533332 PIP4K2AP48426 406 aaPredicted RBP20.07■□□□□ 0.8
SYT13-203ENST00000533332 FKBP8Q14318 412 aa20.07■□□□□ 0.8
SYT13-203ENST00000533332 DZIP3Q86Y13 1208 aaKnown RBP20.07■□□□□ 0.8
SYT13-203ENST00000533332 NECTIN2Q92692 538 aa20.07■□□□□ 0.8
SYT13-203ENST00000533332 SPON1Q9HCB6 807 aa20.07■□□□□ 0.8
SYT13-203ENST00000533332 CHPF2Q9P2E5 772 aa20.07■□□□□ 0.8
SYT13-203ENST00000533332 ZNF330Q9Y3S2 320 aaPredicted RBP20.07■□□□□ 0.8
SYT13-203ENST00000533332 GYS1P13807 737 aa20.07■□□□□ 0.8
SYT13-203ENST00000533332 CLEC4GQ6UXB4 293 aa20.07■□□□□ 0.8
SYT13-203ENST00000533332 STK31Q9BXU1 1019 aa20.07■□□□□ 0.8
SYT13-203ENST00000533332 ERVV-1B6SEH8 477 aa20.06■□□□□ 0.8
SYT13-203ENST00000533332 ZBTB7AO95365 584 aa20.06■□□□□ 0.8
SYT13-203ENST00000533332 TBC1D2BQ9UPU7 963 aa20.06■□□□□ 0.8
SYT13-203ENST00000533332 USPL1Q5W0Q7 1092 aa20.05■□□□□ 0.8
SYT13-203ENST00000533332 PROSER3Q2NL68 480 aa20.05■□□□□ 0.8
SYT13-203ENST00000533332 C4AP0C0L4 1744 aa20.04■□□□□ 0.8
SYT13-203ENST00000533332 CAMTA2O94983 1202 aa20.04■□□□□ 0.8
SYT13-203ENST00000533332 COPS6Q7L5N1 327 aa20.04■□□□□ 0.8
SYT13-203ENST00000533332 ARXQ96QS3 562 aa20.04■□□□□ 0.8
SYT13-203ENST00000533332 KIF6Q6ZMV9 814 aa20.03■□□□□ 0.8
SYT13-203ENST00000533332 SRP68Q9UHB9 627 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms