RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
C11orf54-212ENST00000533154 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
C11orf54-212ENST00000533154 TRERF1Q96PN7 1200 aa8.26□□□□□ -1.09
C11orf54-212ENST00000533154 RRAGCQ9HB90 399 aa8.26□□□□□ -1.09
C11orf54-212ENST00000533154 LRRC4BQ9NT99 713 aa8.26□□□□□ -1.09
C11orf54-212ENST00000533154 NSFL1CQ9UNZ2 370 aaKnown RBP8.26□□□□□ -1.09
C11orf54-212ENST00000533154 USP17L5A8MUK1 530 aa8.25□□□□□ -1.09
C11orf54-212ENST00000533154 PIK3CDO00329 1044 aa8.25□□□□□ -1.09
C11orf54-212ENST00000533154 RAB15P59190 212 aa8.25□□□□□ -1.09
C11orf54-212ENST00000533154 GRIN2CQ14957 1233 aa8.25□□□□□ -1.09
C11orf54-212ENST00000533154 TMEM164Q5U3C3 297 aa8.25□□□□□ -1.09
C11orf54-212ENST00000533154 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
C11orf54-212ENST00000533154 PTGIRP43119 386 aa8.24□□□□□ -1.09
C11orf54-212ENST00000533154 MCCD1P59942 119 aaPredicted RBP8.24□□□□□ -1.09
C11orf54-212ENST00000533154 ZBTB33Q86T24 672 aa8.24□□□□□ -1.09
C11orf54-212ENST00000533154 ALYREFQ86V81 257 aaKnown RBP8.24□□□□□ -1.09
C11orf54-212ENST00000533154 ZNF784Q8NCA9 323 aaPredicted RBP8.24□□□□□ -1.09
C11orf54-212ENST00000533154 NOVA2Q9UNW9 492 aaKnown RBP8.24□□□□□ -1.09
C11orf54-212ENST00000533154 SKIP12755 728 aa8.23□□□□□ -1.09
C11orf54-212ENST00000533154 TXNDC2Q86VQ3 553 aa8.23□□□□□ -1.09
C11orf54-212ENST00000533154 CCER1Q8TC90 406 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-212ENST00000533154 STK32AQ8WU08 396 aa8.23□□□□□ -1.09
C11orf54-212ENST00000533154 ZNF608Q9ULD9 1512 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-212ENST00000533154 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
C11orf54-212ENST00000533154 LZTS3O60299 673 aaPredicted RBP8.22□□□□□ -1.09
C11orf54-212ENST00000533154 ZMYM1Q5SVZ6 1142 aa8.22□□□□□ -1.09
C11orf54-212ENST00000533154 GAS2L1Q99501 681 aaPredicted RBP8.22□□□□□ -1.09
C11orf54-212ENST00000533154 OXCT2Q9BYC2 517 aaPredicted RBP8.22□□□□□ -1.09
C11orf54-212ENST00000533154 CCDC88BA6NC98 1476 aa8.21□□□□□ -1.09
C11orf54-212ENST00000533154 USP17L15C9J2P7 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L10C9JJH3 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L13C9JLJ4 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L12C9JPN9 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L11C9JVI0 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L21D6R901 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L18D6R9N7 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L22D6RA61 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L17D6RBQ6 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L19D6RCP7 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L20D6RJB6 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 E9PSI1 815 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 H7C1W4 665 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 ITGB7P26010 798 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 ADD1P35611 737 aaKnown RBP8.21□□□□□ -1.1
C11orf54-212ENST00000533154 USP17L24Q0WX57 530 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 PDXDC2PQ6P474 469 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 KDF1Q8NAX2 398 aaPredicted RBP8.21□□□□□ -1.1
C11orf54-212ENST00000533154 ZNF428Q96B54 188 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 KRTAP4-12Q9BQ66 201 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 SEMA6BQ9H3T3 888 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 RIMBP3CA6NJZ7 1639 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 RIMBP3BA6NNM3 1639 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 RIMBP3Q9UFD9 1639 aa8.21□□□□□ -1.1
C11orf54-212ENST00000533154 PRDM2Q13029 1718 aa8.2□□□□□ -1.1
C11orf54-212ENST00000533154 C1QTNF9BB2RNN3 333 aa8.2□□□□□ -1.1
C11orf54-212ENST00000533154 ATP5J2-PTCD1G3V325 749 aa8.2□□□□□ -1.1
C11orf54-212ENST00000533154 BTBD11A6QL63 1104 aa8.19□□□□□ -1.1
C11orf54-212ENST00000533154 RNF144AP50876 292 aaPredicted RBP8.19□□□□□ -1.1
C11orf54-212ENST00000533154 CLP1Q92989 425 aaKnown RBP8.19□□□□□ -1.1
C11orf54-212ENST00000533154 SUV39H2Q9H5I1 410 aa8.19□□□□□ -1.1
C11orf54-212ENST00000533154 CHIC2Q9UKJ5 165 aa8.19□□□□□ -1.1
C11orf54-212ENST00000533154 IFT140Q96RY7 1462 aa8.19□□□□□ -1.1
C11orf54-212ENST00000533154 SCO2A0A1W2PP80 73 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 LILRA1O75019 489 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 SSFA2P28290 1259 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 MAP2K3P46734 347 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 PTK2Q05397 1052 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 PTK7Q13308 1070 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 SLFNL1Q499Z3 407 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 CRTC2Q53ET0 693 aaPredicted RBP8.18□□□□□ -1.1
C11orf54-212ENST00000533154 PHLDB3Q6NSJ2 640 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 CEP126Q9P2H0 1117 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 MKRN1Q9UHC7 482 aaKnown RBP8.18□□□□□ -1.1
C11orf54-212ENST00000533154 TOPBP1Q92547 1522 aa8.18□□□□□ -1.1
C11orf54-212ENST00000533154 ERCC3P19447 782 aa8.17□□□□□ -1.1
C11orf54-212ENST00000533154 ARID4AP29374 1257 aaPredicted RBP8.17□□□□□ -1.1
C11orf54-212ENST00000533154 NCOA4Q13772 614 aa8.17□□□□□ -1.1
C11orf54-212ENST00000533154 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
C11orf54-212ENST00000533154 LARP1Q6PKG0 1096 aaKnown RBP8.17□□□□□ -1.1
C11orf54-212ENST00000533154 CD163Q86VB7 1156 aa8.17□□□□□ -1.1
C11orf54-212ENST00000533154 PHTF2Q8N3S3 785 aa8.17□□□□□ -1.1
C11orf54-212ENST00000533154 DYRK1BQ9Y463 629 aa8.17□□□□□ -1.1
C11orf54-212ENST00000533154 ARHGEF11O15085 1522 aa8.17□□□□□ -1.1
C11orf54-212ENST00000533154 ERVH48-1M5A8F1 160 aa8.16□□□□□ -1.1
C11orf54-212ENST00000533154 FAM69CQ0P6D2 419 aa8.16□□□□□ -1.1
C11orf54-212ENST00000533154 DOC2BQ14184 412 aa8.16□□□□□ -1.1
C11orf54-212ENST00000533154 SWI5Q1ZZU3 235 aa8.16□□□□□ -1.1
C11orf54-212ENST00000533154 NBPF20Q3BBV1 942 aa8.16□□□□□ -1.1
C11orf54-212ENST00000533154 C1orf229Q6ZS94 237 aaPredicted RBP8.16□□□□□ -1.1
C11orf54-212ENST00000533154 RNF135Q8IUD6 432 aa8.16□□□□□ -1.1
C11orf54-212ENST00000533154 PLPP7Q8NBV4 271 aa8.16□□□□□ -1.1
C11orf54-212ENST00000533154 CDCA7Q9BWT1 371 aaPredicted RBP8.16□□□□□ -1.1
C11orf54-212ENST00000533154 MEN1O00255 615 aa8.15□□□□□ -1.1
C11orf54-212ENST00000533154 AMPD1P23109 780 aa8.15□□□□□ -1.1
C11orf54-212ENST00000533154 DEPDC4Q8N2C3 294 aa8.15□□□□□ -1.1
C11orf54-212ENST00000533154 FAM200AQ8TCP9 573 aa8.15□□□□□ -1.1
C11orf54-212ENST00000533154 OCSTAMPQ9BR26 566 aa8.15□□□□□ -1.1
C11orf54-212ENST00000533154 EIF4G3O43432 1585 aaKnown RBP8.14□□□□□ -1.11
C11orf54-212ENST00000533154 AQRO60306 1485 aaKnown RBP eCLIP8.14□□□□□ -1.11
C11orf54-212ENST00000533154 PIK3R2O00459 728 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms