RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 CXXC1Q9P0U4 656 aaPredicted RBP12.99□□□□□ -0.33
KNL1-209ENST00000532347 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
KNL1-209ENST00000532347 BMP1P13497 986 aa12.98□□□□□ -0.33
KNL1-209ENST00000532347 TRIM26Q12899 539 aaPredicted RBP12.98□□□□□ -0.33
KNL1-209ENST00000532347 C6orf118Q5T5N4 469 aa12.98□□□□□ -0.33
KNL1-209ENST00000532347 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
KNL1-209ENST00000532347 AQRO60306 1485 aaKnown RBP eCLIP12.97□□□□□ -0.33
KNL1-209ENST00000532347 C21orf2O43822 256 aa12.97□□□□□ -0.33
KNL1-209ENST00000532347 BMP2P12643 396 aa12.97□□□□□ -0.33
KNL1-209ENST00000532347 TBCELQ5QJ74 424 aa12.97□□□□□ -0.33
KNL1-209ENST00000532347 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
KNL1-209ENST00000532347 SCG3Q8WXD2 468 aaKnown RBP12.97□□□□□ -0.33
KNL1-209ENST00000532347 USP3Q9Y6I4 520 aa12.97□□□□□ -0.33
KNL1-209ENST00000532347 CDK2AP1O14519 115 aa12.96□□□□□ -0.33
KNL1-209ENST00000532347 AXIN1O15169 862 aa12.96□□□□□ -0.33
KNL1-209ENST00000532347 CRIPAKQ8N1N5 446 aa12.96□□□□□ -0.33
KNL1-209ENST00000532347 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
KNL1-209ENST00000532347 ATAD2Q6PL18 1390 aa12.95□□□□□ -0.34
KNL1-209ENST00000532347 IGFBP4P22692 258 aa12.95□□□□□ -0.34
KNL1-209ENST00000532347 CTSOP43234 321 aaPredicted RBP12.95□□□□□ -0.34
KNL1-209ENST00000532347 KCNA1Q09470 495 aa12.95□□□□□ -0.34
KNL1-209ENST00000532347 TRIM46Q7Z4K8 759 aa12.95□□□□□ -0.34
KNL1-209ENST00000532347 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
KNL1-209ENST00000532347 POLMQ9NP87 494 aaPredicted RBP12.95□□□□□ -0.34
KNL1-209ENST00000532347 SCNN1AP37088 669 aa12.94□□□□□ -0.34
KNL1-209ENST00000532347 RNF144AP50876 292 aaPredicted RBP12.94□□□□□ -0.34
KNL1-209ENST00000532347 C1orf216Q8TAB5 229 aa12.94□□□□□ -0.34
KNL1-209ENST00000532347 PURBQ96QR8 312 aaKnown RBP12.94□□□□□ -0.34
KNL1-209ENST00000532347 SOGA1O94964 1423 aa12.94□□□□□ -0.34
KNL1-209ENST00000532347 GPC1P35052 558 aa12.93□□□□□ -0.34
KNL1-209ENST00000532347 FKBP5Q13451 457 aaPredicted RBP12.93□□□□□ -0.34
KNL1-209ENST00000532347 SCARF1Q14162 830 aa12.93□□□□□ -0.34
KNL1-209ENST00000532347 FOXD4L5Q5VV16 416 aaPredicted RBP12.93□□□□□ -0.34
KNL1-209ENST00000532347 TAS1R3Q7RTX0 852 aa12.93□□□□□ -0.34
KNL1-209ENST00000532347 ZSCAN10Q96SZ4 725 aaPredicted RBP12.93□□□□□ -0.34
KNL1-209ENST00000532347 GRIP2Q9C0E4 1043 aa12.93□□□□□ -0.34
KNL1-209ENST00000532347 GRIN2BQ13224 1484 aa12.92□□□□□ -0.34
KNL1-209ENST00000532347 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
KNL1-209ENST00000532347 PPP1R12BO60237 982 aaPredicted RBP12.92□□□□□ -0.34
KNL1-209ENST00000532347 SLC27A3Q5K4L6 730 aa12.92□□□□□ -0.34
KNL1-209ENST00000532347 PPARGC1BQ86YN6 1023 aaKnown RBP12.92□□□□□ -0.34
KNL1-209ENST00000532347 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
KNL1-209ENST00000532347 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
KNL1-209ENST00000532347 ST8SIA5O15466 376 aa12.91□□□□□ -0.34
KNL1-209ENST00000532347 TMEM214Q6NUQ4 689 aaKnown RBP12.91□□□□□ -0.34
KNL1-209ENST00000532347 ZNF295-AS1Q8N0V1 137 aa12.91□□□□□ -0.34
KNL1-209ENST00000532347 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
KNL1-209ENST00000532347 AAASQ9NRG9 546 aa12.91□□□□□ -0.34
KNL1-209ENST00000532347 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
KNL1-209ENST00000532347 FOXO3O43524 673 aa12.9□□□□□ -0.34
KNL1-209ENST00000532347 MKNK1Q9BUB5 465 aa12.9□□□□□ -0.34
KNL1-209ENST00000532347 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
KNL1-209ENST00000532347 PSMA6P60900 246 aaKnown RBP12.89□□□□□ -0.35
KNL1-209ENST00000532347 TXNDC2Q86VQ3 553 aa12.89□□□□□ -0.35
KNL1-209ENST00000532347 RNF217Q8TC41 542 aa12.89□□□□□ -0.35
KNL1-209ENST00000532347 ZFP42Q96MM3 310 aa12.89□□□□□ -0.35
KNL1-209ENST00000532347 GTF2E1P29083 439 aaPredicted RBP12.88□□□□□ -0.35
KNL1-209ENST00000532347 ARID4AP29374 1257 aaPredicted RBP12.88□□□□□ -0.35
KNL1-209ENST00000532347 CAPN12Q6ZSI9 719 aa12.88□□□□□ -0.35
KNL1-209ENST00000532347 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
KNL1-209ENST00000532347 RHBDD1Q8TEB9 315 aa12.88□□□□□ -0.35
KNL1-209ENST00000532347 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
KNL1-209ENST00000532347 TTLL8A6PVC2 850 aa12.87□□□□□ -0.35
KNL1-209ENST00000532347 ZDHHC1Q8WTX9 485 aa12.87□□□□□ -0.35
KNL1-209ENST00000532347 C2orf49Q9BVC5 232 aaPredicted RBP12.87□□□□□ -0.35
KNL1-209ENST00000532347 ATP13A2Q9NQ11 1180 aa12.87□□□□□ -0.35
KNL1-209ENST00000532347 GNEQ9Y223 722 aaKnown RBP12.87□□□□□ -0.35
KNL1-209ENST00000532347 IVNS1ABPQ9Y6Y0 642 aa12.87□□□□□ -0.35
KNL1-209ENST00000532347 SOS2Q07890 1332 aaPredicted RBP12.87□□□□□ -0.35
KNL1-209ENST00000532347 FGD5Q6ZNL6 1462 aa12.86□□□□□ -0.35
KNL1-209ENST00000532347 TEAD4Q15561 434 aa12.86□□□□□ -0.35
KNL1-209ENST00000532347 GNASQ5JWF2 1037 aa12.86□□□□□ -0.35
KNL1-209ENST00000532347 NIFKQ9BYG3 293 aaKnown RBP12.86□□□□□ -0.35
KNL1-209ENST00000532347 DACH1Q9UI36 760 aa12.86□□□□□ -0.35
KNL1-209ENST00000532347 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
KNL1-209ENST00000532347 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
KNL1-209ENST00000532347 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
KNL1-209ENST00000532347 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
KNL1-209ENST00000532347 PARP3Q9Y6F1 533 aa12.85□□□□□ -0.35
KNL1-209ENST00000532347 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
KNL1-209ENST00000532347 SERTM1A2A2V5 107 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 EML1O00423 815 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 NOS2P35228 1153 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 C4orf17Q53FE4 359 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 PRICKLE2Q7Z3G6 844 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 L3MBTL2Q969R5 705 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 COL26A1Q96A83 441 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 VTI1AQ96AJ9 217 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 SEPT3Q9UH03 358 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 ZNF232Q9UNY5 417 aa12.84□□□□□ -0.35
KNL1-209ENST00000532347 SPATA31C2B4DYI2 1134 aa12.83□□□□□ -0.36
KNL1-209ENST00000532347 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
KNL1-209ENST00000532347 LYSMD3Q7Z3D4 306 aa12.83□□□□□ -0.36
KNL1-209ENST00000532347 FIGNL2A6NMB9 653 aa12.82□□□□□ -0.36
KNL1-209ENST00000532347 SERPINB4P48594 390 aa12.82□□□□□ -0.36
KNL1-209ENST00000532347 POU4F2Q12837 409 aa12.82□□□□□ -0.36
KNL1-209ENST00000532347 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
KNL1-209ENST00000532347 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
KNL1-209ENST00000532347 ABCA10Q8WWZ4 1543 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms