RNA–Protein interactions for RNA: ENST00000531555.5

TRIM29-217, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-217ENST00000531555 TRMT2AQ8IZ69 625 aaKnown RBP10.68□□□□□ -0.7
TRIM29-217ENST00000531555 LINC00116Q8NCU8 138 aa10.68□□□□□ -0.7
TRIM29-217ENST00000531555 NECTIN2Q92692 538 aa10.68□□□□□ -0.7
TRIM29-217ENST00000531555 SNRPA1P09661 255 aaKnown RBP10.67□□□□□ -0.7
TRIM29-217ENST00000531555 USP16Q9Y5T5 823 aa10.67□□□□□ -0.7
TRIM29-217ENST00000531555 C4AP0C0L4 1744 aa10.67□□□□□ -0.7
TRIM29-217ENST00000531555 EIF2S2P20042 333 aaKnown RBP10.66□□□□□ -0.7
TRIM29-217ENST00000531555 PIP4K2AP48426 406 aaPredicted RBP10.66□□□□□ -0.7
TRIM29-217ENST00000531555 TWISTNBQ3B726 338 aaPredicted RBP10.66□□□□□ -0.7
TRIM29-217ENST00000531555 SLC27A3Q5K4L6 730 aa10.66□□□□□ -0.7
TRIM29-217ENST00000531555 VSIG10Q8N0Z9 540 aa10.66□□□□□ -0.7
TRIM29-217ENST00000531555 QSER1Q2KHR3 1735 aa10.66□□□□□ -0.7
TRIM29-217ENST00000531555 TCERG1O14776 1098 aaKnown RBP10.65□□□□□ -0.7
TRIM29-217ENST00000531555 CYP19A1P11511 503 aaPredicted RBP10.65□□□□□ -0.7
TRIM29-217ENST00000531555 HDGFL1Q5TGJ6 251 aa10.65□□□□□ -0.7
TRIM29-217ENST00000531555 VAMP4O75379 141 aa10.64□□□□□ -0.71
TRIM29-217ENST00000531555 ANXA1P04083 346 aa10.64□□□□□ -0.71
TRIM29-217ENST00000531555 A1BGP04217 495 aa10.64□□□□□ -0.71
TRIM29-217ENST00000531555 CRKLP46109 303 aaKnown RBP10.64□□□□□ -0.71
TRIM29-217ENST00000531555 ZNF827Q17R98 1081 aa10.64□□□□□ -0.71
TRIM29-217ENST00000531555 SMIM5Q71RC9 77 aa10.64□□□□□ -0.71
TRIM29-217ENST00000531555 BCORQ6W2J9 1755 aa10.63□□□□□ -0.71
TRIM29-217ENST00000531555 HOXB7P09629 217 aa10.63□□□□□ -0.71
TRIM29-217ENST00000531555 CANXP27824 592 aaKnown RBP10.63□□□□□ -0.71
TRIM29-217ENST00000531555 INTS5Q6P9B9 1019 aaKnown RBP10.63□□□□□ -0.71
TRIM29-217ENST00000531555 AMIGO3Q86WK7 504 aa10.63□□□□□ -0.71
TRIM29-217ENST00000531555 TEX13AQ9BXU3 409 aaPredicted RBP10.63□□□□□ -0.71
TRIM29-217ENST00000531555 ANO8Q9HCE9 1232 aaPredicted RBP10.63□□□□□ -0.71
TRIM29-217ENST00000531555 CCDC87Q9NVE4 849 aa10.63□□□□□ -0.71
TRIM29-217ENST00000531555 ZBTB1Q9Y2K1 713 aa10.63□□□□□ -0.71
TRIM29-217ENST00000531555 ARFGEF2Q9Y6D5 1785 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 CNTNAP4Q9C0A0 1308 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 NBPF26B4DH59 902 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 STARD3NLO95772 234 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 MYL6BP14649 208 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 PROSER3Q2NL68 480 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 NBPF14Q5TI25 921 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 NBPF10Q6P3W6 841 aaKnown RBP10.62□□□□□ -0.71
TRIM29-217ENST00000531555 NBPF15Q8N660 670 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 AK7Q96M32 723 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 CHPF2Q9P2E5 772 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 ZNF330Q9Y3S2 320 aaPredicted RBP10.62□□□□□ -0.71
TRIM29-217ENST00000531555 NUP98P52948 1817 aa10.62□□□□□ -0.71
TRIM29-217ENST00000531555 SCN7AQ01118 1682 aa10.61□□□□□ -0.71
TRIM29-217ENST00000531555 GNPATO15228 680 aa10.61□□□□□ -0.71
TRIM29-217ENST00000531555 PHF14O94880 888 aa10.61□□□□□ -0.71
TRIM29-217ENST00000531555 AKT1S1Q96B36 256 aa10.61□□□□□ -0.71
TRIM29-217ENST00000531555 BCL2L13Q9BXK5 485 aa10.61□□□□□ -0.71
TRIM29-217ENST00000531555 SOS1Q07889 1333 aaPredicted RBP10.6□□□□□ -0.71
TRIM29-217ENST00000531555 ANKRD36CQ5JPF3 1778 aa10.6□□□□□ -0.71
TRIM29-217ENST00000531555 SOCS7O14512 581 aa10.6□□□□□ -0.71
TRIM29-217ENST00000531555 PDIA6Q15084 440 aa10.6□□□□□ -0.71
TRIM29-217ENST00000531555 CCDC30Q5VVM6 783 aa10.6□□□□□ -0.71
TRIM29-217ENST00000531555 STK32BQ9NY57 414 aa10.6□□□□□ -0.71
TRIM29-217ENST00000531555 COL15A1P39059 1388 aa10.6□□□□□ -0.71
TRIM29-217ENST00000531555 AFDNP55196 1824 aaKnown RBP10.6□□□□□ -0.71
TRIM29-217ENST00000531555 CASZ1Q86V15 1759 aa10.6□□□□□ -0.71
TRIM29-217ENST00000531555 SLC15A2Q16348 729 aa10.59□□□□□ -0.71
TRIM29-217ENST00000531555 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
TRIM29-217ENST00000531555 SSH1Q8WYL5 1049 aa10.59□□□□□ -0.71
TRIM29-217ENST00000531555 STK31Q9BXU1 1019 aa10.59□□□□□ -0.71
TRIM29-217ENST00000531555 DDX21Q9NR30 783 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRIM29-217ENST00000531555 TFCP2L1Q9NZI6 479 aa10.59□□□□□ -0.71
TRIM29-217ENST00000531555 DBF4Q9UBU7 674 aaPredicted RBP10.59□□□□□ -0.71
TRIM29-217ENST00000531555 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
TRIM29-217ENST00000531555 RPS6KA4O75676 772 aa10.58□□□□□ -0.72
TRIM29-217ENST00000531555 SLC4A2P04920 1241 aa10.58□□□□□ -0.72
TRIM29-217ENST00000531555 CT47B1P0C2W7 299 aaPredicted RBP10.58□□□□□ -0.72
TRIM29-217ENST00000531555 IL6STP40189 918 aaPredicted RBP10.58□□□□□ -0.72
TRIM29-217ENST00000531555 RARSP54136 660 aaKnown RBP10.58□□□□□ -0.72
TRIM29-217ENST00000531555 AIMP1Q12904 312 aaKnown RBP10.58□□□□□ -0.72
TRIM29-217ENST00000531555 G2E3Q7L622 706 aa10.58□□□□□ -0.72
TRIM29-217ENST00000531555 LRP10Q7Z4F1 713 aa10.58□□□□□ -0.72
TRIM29-217ENST00000531555 MRPL50Q8N5N7 158 aaKnown RBP10.58□□□□□ -0.72
TRIM29-217ENST00000531555 ARXQ96QS3 562 aa10.58□□□□□ -0.72
TRIM29-217ENST00000531555 PHAXQ9H814 394 aaKnown RBP10.58□□□□□ -0.72
TRIM29-217ENST00000531555 SMC4Q9NTJ3 1288 aa10.58□□□□□ -0.72
TRIM29-217ENST00000531555 RTCBQ9Y3I0 505 aaKnown RBP10.58□□□□□ -0.72
TRIM29-217ENST00000531555 PNPLA7Q6ZV29 1317 aa10.58□□□□□ -0.72
TRIM29-217ENST00000531555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
TRIM29-217ENST00000531555 BCAR3O75815 825 aa10.57□□□□□ -0.72
TRIM29-217ENST00000531555 EIF5P55010 431 aaKnown RBP10.57□□□□□ -0.72
TRIM29-217ENST00000531555 TTLL7Q6ZT98 887 aa10.57□□□□□ -0.72
TRIM29-217ENST00000531555 XAGE3Q8WTP9 111 aa10.57□□□□□ -0.72
TRIM29-217ENST00000531555 TBC1D2BQ9UPU7 963 aa10.57□□□□□ -0.72
TRIM29-217ENST00000531555 N4BP2Q86UW6 1770 aaPredicted RBP10.57□□□□□ -0.72
TRIM29-217ENST00000531555 PSDA5PKW4 1024 aaPredicted RBP10.56□□□□□ -0.72
TRIM29-217ENST00000531555 SSFA2P28290 1259 aa10.56□□□□□ -0.72
TRIM29-217ENST00000531555 R3HDM1Q15032 1099 aaKnown RBP10.56□□□□□ -0.72
TRIM29-217ENST00000531555 ALDH1L2Q3SY69 923 aa10.56□□□□□ -0.72
TRIM29-217ENST00000531555 COPS6Q7L5N1 327 aa10.56□□□□□ -0.72
TRIM29-217ENST00000531555 COL23A1Q86Y22 540 aaPredicted RBP10.56□□□□□ -0.72
TRIM29-217ENST00000531555 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
TRIM29-217ENST00000531555 ZNF428Q96B54 188 aa10.56□□□□□ -0.72
TRIM29-217ENST00000531555 PDGFDQ9GZP0 370 aaPredicted RBP10.56□□□□□ -0.72
TRIM29-217ENST00000531555 HYPKQ9NX55 129 aa10.56□□□□□ -0.72
TRIM29-217ENST00000531555 SRP68Q9UHB9 627 aaKnown RBP10.56□□□□□ -0.72
TRIM29-217ENST00000531555 RCAN3Q9UKA8 241 aa10.56□□□□□ -0.72
TRIM29-217ENST00000531555 HMGB2P26583 209 aaKnown RBP10.55□□□□□ -0.72
TRIM29-217ENST00000531555 TRAPPC3LQ5T215 181 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms