RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 ATXN7O15265 892 aaPredicted RBP10.64□□□□□ -0.71
CASP4-210ENST00000531546 STAU1O95793 577 aaKnown RBP10.64□□□□□ -0.71
CASP4-210ENST00000531546 ADH6P28332 368 aa10.64□□□□□ -0.71
CASP4-210ENST00000531546 GDF10P55107 478 aa10.64□□□□□ -0.71
CASP4-210ENST00000531546 NBPF1Q3BBV0 1214 aa10.64□□□□□ -0.71
CASP4-210ENST00000531546 FAM182BQ5T319 152 aa10.64□□□□□ -0.71
CASP4-210ENST00000531546 C1QTNF9BB2RNN3 333 aa10.63□□□□□ -0.71
CASP4-210ENST00000531546 SCNN1DP51172 638 aa10.63□□□□□ -0.71
CASP4-210ENST00000531546 BRPF1P55201 1214 aaPredicted RBP10.63□□□□□ -0.71
CASP4-210ENST00000531546 TSGA10IPQ3SY00 556 aa10.63□□□□□ -0.71
CASP4-210ENST00000531546 CHSY3Q70JA7 882 aa10.63□□□□□ -0.71
CASP4-210ENST00000531546 Q8N3U1 123 aa10.63□□□□□ -0.71
CASP4-210ENST00000531546 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
CASP4-210ENST00000531546 MAP7D1Q3KQU3 841 aa10.62□□□□□ -0.71
CASP4-210ENST00000531546 AIDAQ96BJ3 306 aa10.62□□□□□ -0.71
CASP4-210ENST00000531546 SMTNP53814 917 aa10.61□□□□□ -0.71
CASP4-210ENST00000531546 CD163Q86VB7 1156 aa10.61□□□□□ -0.71
CASP4-210ENST00000531546 DCDC2BA2VCK2 349 aa10.6□□□□□ -0.71
CASP4-210ENST00000531546 MAPTP10636 758 aaKnown RBP10.6□□□□□ -0.71
CASP4-210ENST00000531546 TATP17735 454 aaPredicted RBP10.6□□□□□ -0.71
CASP4-210ENST00000531546 ARSJQ5FYB0 599 aaPredicted RBP10.6□□□□□ -0.71
CASP4-210ENST00000531546 A0A1W2PNR3 127 aa10.59□□□□□ -0.71
CASP4-210ENST00000531546 CHRNA4P43681 627 aa10.59□□□□□ -0.71
CASP4-210ENST00000531546 ZDHHC3Q9NYG2 299 aa10.59□□□□□ -0.71
CASP4-210ENST00000531546 KHNYNO15037 678 aaKnown RBP10.58□□□□□ -0.72
CASP4-210ENST00000531546 TNP2Q05952 138 aa10.58□□□□□ -0.72
CASP4-210ENST00000531546 IRF5Q13568 498 aa10.58□□□□□ -0.72
CASP4-210ENST00000531546 FAM157BP0CG42 384 aa10.57□□□□□ -0.72
CASP4-210ENST00000531546 CD33P20138 364 aa10.57□□□□□ -0.72
CASP4-210ENST00000531546 PLPP7Q8NBV4 271 aa10.57□□□□□ -0.72
CASP4-210ENST00000531546 GJA3Q9Y6H8 435 aa10.57□□□□□ -0.72
CASP4-210ENST00000531546 VAC14Q08AM6 782 aa10.56□□□□□ -0.72
CASP4-210ENST00000531546 FCHSD1Q86WN1 690 aa10.56□□□□□ -0.72
CASP4-210ENST00000531546 MTFR1Q15390 333 aa10.55□□□□□ -0.72
CASP4-210ENST00000531546 ZNF468Q5VIY5 522 aaPredicted RBP10.55□□□□□ -0.72
CASP4-210ENST00000531546 RB1CC1Q8TDY2 1594 aa10.55□□□□□ -0.72
CASP4-210ENST00000531546 CDK2AP1O14519 115 aa10.54□□□□□ -0.72
CASP4-210ENST00000531546 SPATA31C1P0DKV0 1188 aa10.54□□□□□ -0.72
CASP4-210ENST00000531546 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
CASP4-210ENST00000531546 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
CASP4-210ENST00000531546 SLC4A9Q96Q91 983 aa10.54□□□□□ -0.72
CASP4-210ENST00000531546 SERTAD1Q9UHV2 236 aa10.54□□□□□ -0.72
CASP4-210ENST00000531546 PRR12Q9ULL5 1215 aa10.54□□□□□ -0.72
CASP4-210ENST00000531546 A6NJY4 79 aa10.53□□□□□ -0.72
CASP4-210ENST00000531546 SOX11P35716 441 aa10.53□□□□□ -0.72
CASP4-210ENST00000531546 LAMC2Q13753 1193 aa10.53□□□□□ -0.72
CASP4-210ENST00000531546 CABP1Q9NZU7 370 aa10.53□□□□□ -0.72
CASP4-210ENST00000531546 KLF15Q9UIH9 416 aa10.53□□□□□ -0.72
CASP4-210ENST00000531546 SPDYE3A6NKU9 549 aa10.52□□□□□ -0.73
CASP4-210ENST00000531546 SEMA3FQ13275 785 aa10.52□□□□□ -0.73
CASP4-210ENST00000531546 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
CASP4-210ENST00000531546 ZIC5Q96T25 663 aa10.52□□□□□ -0.73
CASP4-210ENST00000531546 MARK1Q9P0L2 795 aa10.52□□□□□ -0.73
CASP4-210ENST00000531546 IQSEC3Q9UPP2 1182 aaPredicted RBP10.52□□□□□ -0.73
CASP4-210ENST00000531546 TMEM229AB2RXF0 380 aa10.51□□□□□ -0.73
CASP4-210ENST00000531546 BICDL1Q6ZP65 573 aa10.51□□□□□ -0.73
CASP4-210ENST00000531546 GATA4P43694 442 aa10.5□□□□□ -0.73
CASP4-210ENST00000531546 PCBP4P57723 403 aaKnown RBP10.5□□□□□ -0.73
CASP4-210ENST00000531546 TRIM11Q96F44 468 aa10.5□□□□□ -0.73
CASP4-210ENST00000531546 PLVAPQ9BX97 442 aa10.5□□□□□ -0.73
CASP4-210ENST00000531546 HCN2Q9UL51 889 aa10.5□□□□□ -0.73
CASP4-210ENST00000531546 ELOA3CA0A087WX78 387 aaPredicted RBP10.49□□□□□ -0.73
CASP4-210ENST00000531546 ELOA3DA6NLF2 546 aaPredicted RBP10.49□□□□□ -0.73
CASP4-210ENST00000531546 BACH1O14867 736 aa10.49□□□□□ -0.73
CASP4-210ENST00000531546 ALAS2P22557 587 aa10.49□□□□□ -0.73
CASP4-210ENST00000531546 ABL2P42684 1182 aa10.49□□□□□ -0.73
CASP4-210ENST00000531546 DOC2BQ14184 412 aa10.49□□□□□ -0.73
CASP4-210ENST00000531546 ELOA3BQ3SY89 546 aa10.49□□□□□ -0.73
CASP4-210ENST00000531546 ELOA3Q8NG57 546 aa10.49□□□□□ -0.73
CASP4-210ENST00000531546 SEMA6BQ9H3T3 888 aa10.49□□□□□ -0.73
CASP4-210ENST00000531546 EFSO43281 561 aa10.48□□□□□ -0.73
CASP4-210ENST00000531546 GDPD2Q9HCC8 539 aa10.48□□□□□ -0.73
CASP4-210ENST00000531546 EML3Q32P44 896 aa10.47□□□□□ -0.73
CASP4-210ENST00000531546 PRRT3Q5FWE3 981 aa10.47□□□□□ -0.73
CASP4-210ENST00000531546 USP3Q9Y6I4 520 aa10.47□□□□□ -0.73
CASP4-210ENST00000531546 KRTAP4-8Q9BYQ9 185 aa10.46□□□□□ -0.73
CASP4-210ENST00000531546 SYT9Q86SS6 491 aa10.45□□□□□ -0.74
CASP4-210ENST00000531546 STRN4Q9NRL3 753 aa10.45□□□□□ -0.74
CASP4-210ENST00000531546 GPC6Q9Y625 555 aaPredicted RBP10.45□□□□□ -0.74
CASP4-210ENST00000531546 ITGB7P26010 798 aa10.44□□□□□ -0.74
CASP4-210ENST00000531546 ZMYM1Q5SVZ6 1142 aa10.44□□□□□ -0.74
CASP4-210ENST00000531546 PCDHGA11Q9Y5H2 935 aa10.44□□□□□ -0.74
CASP4-210ENST00000531546 LZTS3O60299 673 aaPredicted RBP10.43□□□□□ -0.74
CASP4-210ENST00000531546 SIN3BO75182 1162 aa10.43□□□□□ -0.74
CASP4-210ENST00000531546 APBA3O96018 575 aa10.43□□□□□ -0.74
CASP4-210ENST00000531546 TXLNAP40222 546 aa10.43□□□□□ -0.74
CASP4-210ENST00000531546 SCHIP1Q9P0W5 487 aaPredicted RBP10.43□□□□□ -0.74
CASP4-210ENST00000531546 NOD1Q9Y239 953 aa10.43□□□□□ -0.74
CASP4-210ENST00000531546 PARP3Q9Y6F1 533 aa10.43□□□□□ -0.74
CASP4-210ENST00000531546 NEUROD4Q9HD90 331 aa10.42□□□□□ -0.74
CASP4-210ENST00000531546 ADARB2-AS1A8MUL3 147 aa10.41□□□□□ -0.74
CASP4-210ENST00000531546 GTF2IP78347 998 aa10.41□□□□□ -0.74
CASP4-210ENST00000531546 PSME1Q06323 249 aa10.41□□□□□ -0.74
CASP4-210ENST00000531546 TEAD4Q15561 434 aa10.41□□□□□ -0.74
CASP4-210ENST00000531546 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
CASP4-210ENST00000531546 NACC1Q96RE7 527 aa10.41□□□□□ -0.74
CASP4-210ENST00000531546 MDFIQ99750 246 aa10.41□□□□□ -0.74
CASP4-210ENST00000531546 NEUROD1Q13562 356 aa10.4□□□□□ -0.74
CASP4-210ENST00000531546 ZDHHC1Q8WTX9 485 aa10.4□□□□□ -0.74
CASP4-210ENST00000531546 TNFRSF25Q93038 417 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms