RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 TUBGCP6Q96RT7 1819 aa21.92■■□□□ 1.1
SF3B2-211ENST00000531041 LINC00116Q8NCU8 138 aa21.91■■□□□ 1.1
SF3B2-211ENST00000531041 USP16Q9Y5T5 823 aa21.91■■□□□ 1.1
SF3B2-211ENST00000531041 STARD3NLO95772 234 aa21.9■■□□□ 1.1
SF3B2-211ENST00000531041 CYP19A1P11511 503 aaPredicted RBP21.9■■□□□ 1.1
SF3B2-211ENST00000531041 EXOSC9Q06265 439 aaKnown RBP21.9■■□□□ 1.1
SF3B2-211ENST00000531041 QSER1Q2KHR3 1735 aa21.9■■□□□ 1.1
SF3B2-211ENST00000531041 TSPYL6Q8N831 410 aa21.89■■□□□ 1.1
SF3B2-211ENST00000531041 CNTNAP4Q9C0A0 1308 aa21.89■■□□□ 1.09
SF3B2-211ENST00000531041 RC3H1Q5TC82 1133 aaKnown RBP21.89■■□□□ 1.09
SF3B2-211ENST00000531041 ELL2O00472 640 aaPredicted RBP21.88■■□□□ 1.09
SF3B2-211ENST00000531041 TWISTNBQ3B726 338 aaPredicted RBP21.88■■□□□ 1.09
SF3B2-211ENST00000531041 CRKLP46109 303 aaKnown RBP21.87■■□□□ 1.09
SF3B2-211ENST00000531041 VAMP4O75379 141 aa21.85■■□□□ 1.09
SF3B2-211ENST00000531041 INTS5Q6P9B9 1019 aaKnown RBP21.85■■□□□ 1.09
SF3B2-211ENST00000531041 AKT1S1Q96B36 256 aa21.85■■□□□ 1.09
SF3B2-211ENST00000531041 CHMP4AQ9BY43 222 aa21.85■■□□□ 1.09
SF3B2-211ENST00000531041 CCDC87Q9NVE4 849 aa21.85■■□□□ 1.09
SF3B2-211ENST00000531041 EIF2S2P20042 333 aaKnown RBP21.84■■□□□ 1.09
SF3B2-211ENST00000531041 ERBB4Q15303 1308 aa21.83■■□□□ 1.09
SF3B2-211ENST00000531041 A1BGP04217 495 aa21.83■■□□□ 1.09
SF3B2-211ENST00000531041 HDGFL1Q5TGJ6 251 aa21.83■■□□□ 1.09
SF3B2-211ENST00000531041 C4AP0C0L4 1744 aa21.82■■□□□ 1.08
SF3B2-211ENST00000531041 CT47B1P0C2W7 299 aaPredicted RBP21.82■■□□□ 1.08
SF3B2-211ENST00000531041 ZNF827Q17R98 1081 aa21.82■■□□□ 1.08
SF3B2-211ENST00000531041 AK7Q96M32 723 aa21.82■■□□□ 1.08
SF3B2-211ENST00000531041 ANO8Q9HCE9 1232 aaPredicted RBP21.82■■□□□ 1.08
SF3B2-211ENST00000531041 ZBTB1Q9Y2K1 713 aa21.82■■□□□ 1.08
SF3B2-211ENST00000531041 RPS6KA4O75676 772 aa21.81■■□□□ 1.08
SF3B2-211ENST00000531041 SLC15A2Q16348 729 aa21.81■■□□□ 1.08
SF3B2-211ENST00000531041 NBPF14Q5TI25 921 aa21.81■■□□□ 1.08
SF3B2-211ENST00000531041 CCDC30Q5VVM6 783 aa21.81■■□□□ 1.08
SF3B2-211ENST00000531041 GNPATO15228 680 aa21.8■■□□□ 1.08
SF3B2-211ENST00000531041 NECTIN2Q92692 538 aa21.8■■□□□ 1.08
SF3B2-211ENST00000531041 ZNF428Q96B54 188 aa21.8■■□□□ 1.08
SF3B2-211ENST00000531041 STK32BQ9NY57 414 aa21.8■■□□□ 1.08
SF3B2-211ENST00000531041 NBPF26B4DH59 902 aa21.8■■□□□ 1.08
SF3B2-211ENST00000531041 NBPF10Q6P3W6 841 aaKnown RBP21.8■■□□□ 1.08
SF3B2-211ENST00000531041 NBPF15Q8N660 670 aa21.8■■□□□ 1.08
SF3B2-211ENST00000531041 RTCBQ9Y3I0 505 aaKnown RBP21.8■■□□□ 1.08
SF3B2-211ENST00000531041 CANXP27824 592 aaKnown RBP21.79■■□□□ 1.08
SF3B2-211ENST00000531041 IL6STP40189 918 aaPredicted RBP21.79■■□□□ 1.08
SF3B2-211ENST00000531041 PDIA6Q15084 440 aa21.79■■□□□ 1.08
SF3B2-211ENST00000531041 DDX21Q9NR30 783 aaKnown RBP eCLIP21.79■■□□□ 1.08
SF3B2-211ENST00000531041 TFCP2L1Q9NZI6 479 aa21.79■■□□□ 1.08
SF3B2-211ENST00000531041 DBF4Q9UBU7 674 aaPredicted RBP21.79■■□□□ 1.08
SF3B2-211ENST00000531041 EIF5P55010 431 aaKnown RBP21.78■■□□□ 1.08
SF3B2-211ENST00000531041 CHPF2Q9P2E5 772 aa21.78■■□□□ 1.08
SF3B2-211ENST00000531041 SSFA2P28290 1259 aa21.77■■□□□ 1.08
SF3B2-211ENST00000531041 PIP4K2AP48426 406 aaPredicted RBP21.77■■□□□ 1.08
SF3B2-211ENST00000531041 ADRA2BP18089 450 aa21.76■■□□□ 1.07
SF3B2-211ENST00000531041 AMIGO3Q86WK7 504 aa21.76■■□□□ 1.07
SF3B2-211ENST00000531041 STK31Q9BXU1 1019 aa21.76■■□□□ 1.07
SF3B2-211ENST00000531041 BCORQ6W2J9 1755 aa21.76■■□□□ 1.07
SF3B2-211ENST00000531041 MYL6BP14649 208 aa21.75■■□□□ 1.07
SF3B2-211ENST00000531041 PROSER3Q2NL68 480 aa21.75■■□□□ 1.07
SF3B2-211ENST00000531041 LRP10Q7Z4F1 713 aa21.75■■□□□ 1.07
SF3B2-211ENST00000531041 FLAD1Q8NFF5 587 aa21.75■■□□□ 1.07
SF3B2-211ENST00000531041 NUP98P52948 1817 aa21.75■■□□□ 1.07
SF3B2-211ENST00000531041 COL15A1P39059 1388 aa21.75■■□□□ 1.07
SF3B2-211ENST00000531041 CASZ1Q86V15 1759 aa21.74■■□□□ 1.07
SF3B2-211ENST00000531041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.74■■□□□ 1.07
SF3B2-211ENST00000531041 HYPKQ9NX55 129 aa21.74■■□□□ 1.07
SF3B2-211ENST00000531041 ANXA1P04083 346 aa21.73■■□□□ 1.07
SF3B2-211ENST00000531041 ALDH1L2Q3SY69 923 aa21.73■■□□□ 1.07
SF3B2-211ENST00000531041 TRAPPC3LQ5T215 181 aa21.73■■□□□ 1.07
SF3B2-211ENST00000531041 PNPLA7Q6ZV29 1317 aa21.73■■□□□ 1.07
SF3B2-211ENST00000531041 SCN7AQ01118 1682 aa21.73■■□□□ 1.07
SF3B2-211ENST00000531041 TCERG1O14776 1098 aaKnown RBP21.72■■□□□ 1.07
SF3B2-211ENST00000531041 SMIM5Q71RC9 77 aa21.72■■□□□ 1.07
SF3B2-211ENST00000531041 NPM2Q86SE8 214 aaKnown RBP21.72■■□□□ 1.07
SF3B2-211ENST00000531041 ARHGEF1Q92888 912 aaKnown RBP21.72■■□□□ 1.07
SF3B2-211ENST00000531041 A0A087WZG4 1122 aa21.72■■□□□ 1.07
SF3B2-211ENST00000531041 PHF14O94880 888 aa21.72■■□□□ 1.07
SF3B2-211ENST00000531041 SLC4A2P04920 1241 aa21.72■■□□□ 1.07
SF3B2-211ENST00000531041 ZNF330Q9Y3S2 320 aaPredicted RBP21.72■■□□□ 1.07
SF3B2-211ENST00000531041 RARSP54136 660 aaKnown RBP21.71■■□□□ 1.07
SF3B2-211ENST00000531041 COL23A1Q86Y22 540 aaPredicted RBP21.71■■□□□ 1.07
SF3B2-211ENST00000531041 SSH1Q8WYL5 1049 aa21.71■■□□□ 1.07
SF3B2-211ENST00000531041 ARFGEF2Q9Y6D5 1785 aa21.7■■□□□ 1.06
SF3B2-211ENST00000531041 RFC4P35249 363 aa21.69■■□□□ 1.06
SF3B2-211ENST00000531041 R3HDM1Q15032 1099 aaKnown RBP21.69■■□□□ 1.06
SF3B2-211ENST00000531041 COPS6Q7L5N1 327 aa21.69■■□□□ 1.06
SF3B2-211ENST00000531041 DZIP3Q86Y13 1208 aaKnown RBP21.69■■□□□ 1.06
SF3B2-211ENST00000531041 PHAXQ9H814 394 aaKnown RBP21.69■■□□□ 1.06
SF3B2-211ENST00000531041 ANKRD36CQ5JPF3 1778 aa21.68■■□□□ 1.06
SF3B2-211ENST00000531041 BRPF1P55201 1214 aaPredicted RBP21.68■■□□□ 1.06
SF3B2-211ENST00000531041 MRPL50Q8N5N7 158 aaKnown RBP21.68■■□□□ 1.06
SF3B2-211ENST00000531041 XAGE3Q8WTP9 111 aa21.68■■□□□ 1.06
SF3B2-211ENST00000531041 NARFQ9UHQ1 456 aa21.68■■□□□ 1.06
SF3B2-211ENST00000531041 COL24A1Q17RW2 1714 aa21.67■■□□□ 1.06
SF3B2-211ENST00000531041 TTLL7Q6ZT98 887 aa21.67■■□□□ 1.06
SF3B2-211ENST00000531041 SMC4Q9NTJ3 1288 aa21.67■■□□□ 1.06
SF3B2-211ENST00000531041 TBC1D2BQ9UPU7 963 aa21.67■■□□□ 1.06
SF3B2-211ENST00000531041 USP42Q9H9J4 1324 aaKnown RBP21.66■■□□□ 1.06
SF3B2-211ENST00000531041 AIMP1Q12904 312 aaKnown RBP21.66■■□□□ 1.06
SF3B2-211ENST00000531041 G2E3Q7L622 706 aa21.66■■□□□ 1.06
SF3B2-211ENST00000531041 MAP3K15Q6ZN16 1313 aa21.65■■□□□ 1.06
SF3B2-211ENST00000531041 ZPR1O75312 459 aa21.65■■□□□ 1.06
SF3B2-211ENST00000531041 FLIIQ13045 1269 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms