RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 WASHC2AQ641Q2 1341 aa7.37□□□□□ -1.23
VPS11-204ENST00000530809 ST20-MTHFSA0A0A6YYL1 179 aa7.37□□□□□ -1.23
VPS11-204ENST00000530809 ERVV-2B6SEH9 535 aa7.37□□□□□ -1.23
VPS11-204ENST00000530809 HSP90AB1P08238 724 aaKnown RBP7.37□□□□□ -1.23
VPS11-204ENST00000530809 CDCA8Q53HL2 280 aa7.37□□□□□ -1.23
VPS11-204ENST00000530809 CACNA1SQ13698 1873 aa7.36□□□□□ -1.23
VPS11-204ENST00000530809 ARFGEF2Q9Y6D5 1785 aa7.36□□□□□ -1.23
VPS11-204ENST00000530809 GLTPD2A6NH11 291 aa7.36□□□□□ -1.23
VPS11-204ENST00000530809 MIER1Q8N108 512 aa7.36□□□□□ -1.23
VPS11-204ENST00000530809 RBM42Q9BTD8 480 aaKnown RBP7.36□□□□□ -1.23
VPS11-204ENST00000530809 EMILIN1Q9Y6C2 1016 aa7.36□□□□□ -1.23
VPS11-204ENST00000530809 SCN4AP35499 1836 aa7.36□□□□□ -1.23
VPS11-204ENST00000530809 USP42Q9H9J4 1324 aaKnown RBP7.35□□□□□ -1.23
VPS11-204ENST00000530809 LMNB1P20700 586 aa7.35□□□□□ -1.23
VPS11-204ENST00000530809 EIF4G2P78344 907 aaKnown RBP eCLIP7.35□□□□□ -1.23
VPS11-204ENST00000530809 EYA1Q99502 592 aa7.35□□□□□ -1.23
VPS11-204ENST00000530809 PPM1GO15355 546 aaPredicted RBP7.34□□□□□ -1.23
VPS11-204ENST00000530809 SLC34A2O95436 690 aa7.34□□□□□ -1.23
VPS11-204ENST00000530809 CRKLP46109 303 aaKnown RBP7.34□□□□□ -1.23
VPS11-204ENST00000530809 DPY19L2Q6NUT2 758 aa7.34□□□□□ -1.23
VPS11-204ENST00000530809 SLC4A9Q96Q91 983 aa7.34□□□□□ -1.23
VPS11-204ENST00000530809 ANKRD31Q8N7Z5 1873 aa7.34□□□□□ -1.23
VPS11-204ENST00000530809 CCER2I3L3R5 266 aa7.33□□□□□ -1.24
VPS11-204ENST00000530809 POLRMTO00411 1230 aaKnown RBP7.33□□□□□ -1.24
VPS11-204ENST00000530809 CHRNA5P30532 468 aa7.33□□□□□ -1.24
VPS11-204ENST00000530809 CABP4P57796 275 aa7.33□□□□□ -1.24
VPS11-204ENST00000530809 DDR1Q08345 913 aa7.33□□□□□ -1.24
VPS11-204ENST00000530809 POLA2Q14181 598 aa7.33□□□□□ -1.24
VPS11-204ENST00000530809 AMOTQ4VCS5 1084 aa7.33□□□□□ -1.24
VPS11-204ENST00000530809 PRDM10Q9NQV6 1147 aa7.33□□□□□ -1.24
VPS11-204ENST00000530809 CREBZFQ9NS37 354 aa7.33□□□□□ -1.24
VPS11-204ENST00000530809 ZPR1O75312 459 aa7.32□□□□□ -1.24
VPS11-204ENST00000530809 TM4SF1P30408 202 aa7.32□□□□□ -1.24
VPS11-204ENST00000530809 RASSF7Q02833 373 aa7.32□□□□□ -1.24
VPS11-204ENST00000530809 PLEKHO1Q53GL0 409 aaPredicted RBP7.32□□□□□ -1.24
VPS11-204ENST00000530809 TTLL6Q8N841 843 aa7.32□□□□□ -1.24
VPS11-204ENST00000530809 UBR2Q8IWV8 1755 aa7.32□□□□□ -1.24
VPS11-204ENST00000530809 COL11A2P13942 1736 aaPredicted RBP7.32□□□□□ -1.24
VPS11-204ENST00000530809 SCN7AQ01118 1682 aa7.32□□□□□ -1.24
VPS11-204ENST00000530809 ANP32CO43423 234 aa7.31□□□□□ -1.24
VPS11-204ENST00000530809 PTCD1O75127 700 aaKnown RBP7.31□□□□□ -1.24
VPS11-204ENST00000530809 C1orf141Q5JVX7 400 aa7.31□□□□□ -1.24
VPS11-204ENST00000530809 AIDAQ96BJ3 306 aa7.31□□□□□ -1.24
VPS11-204ENST00000530809 POLKQ9UBT6 870 aa7.31□□□□□ -1.24
VPS11-204ENST00000530809 SRP68Q9UHB9 627 aaKnown RBP7.31□□□□□ -1.24
VPS11-204ENST00000530809 PDZRN3Q9UPQ7 1066 aa7.31□□□□□ -1.24
VPS11-204ENST00000530809 CNTNAP1P78357 1384 aa7.31□□□□□ -1.24
VPS11-204ENST00000530809 CTCFP49711 727 aaPredicted RBP7.3□□□□□ -1.24
VPS11-204ENST00000530809 MTHFSP49914 203 aa7.3□□□□□ -1.24
VPS11-204ENST00000530809 EIF4A2Q14240 407 aaKnown RBP7.3□□□□□ -1.24
VPS11-204ENST00000530809 CHADLQ6NUI6 762 aa7.3□□□□□ -1.24
VPS11-204ENST00000530809 ZNF530Q6P9A1 599 aaPredicted RBP7.3□□□□□ -1.24
VPS11-204ENST00000530809 CARD14Q9BXL6 1004 aa7.3□□□□□ -1.24
VPS11-204ENST00000530809 PCDH10Q9P2E7 1040 aa7.3□□□□□ -1.24
VPS11-204ENST00000530809 COL15A1P39059 1388 aa7.3□□□□□ -1.24
VPS11-204ENST00000530809 MRC1P22897 1456 aa7.3□□□□□ -1.24
VPS11-204ENST00000530809 SOS1Q07889 1333 aaPredicted RBP7.29□□□□□ -1.24
VPS11-204ENST00000530809 LTBP3Q9NS15 1303 aa7.29□□□□□ -1.24
VPS11-204ENST00000530809 ADAMTSL1Q8N6G6 1762 aa7.29□□□□□ -1.24
VPS11-204ENST00000530809 POTECB2RU33 542 aa7.29□□□□□ -1.24
VPS11-204ENST00000530809 H0YIN7 160 aa7.29□□□□□ -1.24
VPS11-204ENST00000530809 NFKBIEO00221 500 aa7.29□□□□□ -1.24
VPS11-204ENST00000530809 FOXN1O15353 648 aa7.29□□□□□ -1.24
VPS11-204ENST00000530809 USPL1Q5W0Q7 1092 aa7.29□□□□□ -1.24
VPS11-204ENST00000530809 INTS5Q6P9B9 1019 aaKnown RBP7.29□□□□□ -1.24
VPS11-204ENST00000530809 MKRN1Q9UHC7 482 aaKnown RBP7.29□□□□□ -1.24
VPS11-204ENST00000530809 NARFQ9UHQ1 456 aa7.29□□□□□ -1.24
VPS11-204ENST00000530809 THSD7BQ9C0I4 1608 aa7.29□□□□□ -1.24
VPS11-204ENST00000530809 BCORQ6W2J9 1755 aa7.28□□□□□ -1.24
VPS11-204ENST00000530809 TRPM7Q96QT4 1865 aa7.28□□□□□ -1.24
VPS11-204ENST00000530809 IQCA1LA6NCM1 817 aa7.28□□□□□ -1.24
VPS11-204ENST00000530809 SERPINB2P05120 415 aa7.28□□□□□ -1.24
VPS11-204ENST00000530809 HSPA5P11021 654 aaKnown RBP7.28□□□□□ -1.24
VPS11-204ENST00000530809 NFIXQ14938 502 aa7.28□□□□□ -1.24
VPS11-204ENST00000530809 ERFEQ4G0M1 354 aa7.28□□□□□ -1.24
VPS11-204ENST00000530809 C2CD5Q86YS7 1000 aa7.28□□□□□ -1.24
VPS11-204ENST00000530809 NFATC2IPQ8NCF5 419 aa7.28□□□□□ -1.24
VPS11-204ENST00000530809 SLX4Q8IY92 1834 aa7.28□□□□□ -1.24
VPS11-204ENST00000530809 PDE6BP35913 854 aa7.27□□□□□ -1.25
VPS11-204ENST00000530809 DDX10Q13206 875 aaKnown RBP7.27□□□□□ -1.25
VPS11-204ENST00000530809 MKRN4PQ13434 485 aaPredicted RBP7.27□□□□□ -1.25
VPS11-204ENST00000530809 SOGA3Q5TF21 947 aa7.27□□□□□ -1.25
VPS11-204ENST00000530809 LDHDQ86WU2 507 aa7.27□□□□□ -1.25
VPS11-204ENST00000530809 PASKQ96RG2 1323 aa7.27□□□□□ -1.25
VPS11-204ENST00000530809 SIPA1L3O60292 1781 aaPredicted RBP7.26□□□□□ -1.25
VPS11-204ENST00000530809 CARMIL3Q8ND23 1372 aa7.26□□□□□ -1.25
VPS11-204ENST00000530809 TMEM88BA6NKF7 163 aa7.26□□□□□ -1.25
VPS11-204ENST00000530809 SPDYE4A6NLX3 237 aa7.26□□□□□ -1.25
VPS11-204ENST00000530809 CYP19A1P11511 503 aaPredicted RBP7.26□□□□□ -1.25
VPS11-204ENST00000530809 DNAJC10Q8IXB1 793 aa7.26□□□□□ -1.25
VPS11-204ENST00000530809 VSIG10Q8N0Z9 540 aa7.26□□□□□ -1.25
VPS11-204ENST00000530809 TAOK3Q9H2K8 898 aa7.26□□□□□ -1.25
VPS11-204ENST00000530809 PCNTO95613 3336 aa7.26□□□□□ -1.25
VPS11-204ENST00000530809 A0A087WZG4 1122 aa7.25□□□□□ -1.25
VPS11-204ENST00000530809 C21orf2O43822 256 aa7.25□□□□□ -1.25
VPS11-204ENST00000530809 MAP2K1Q02750 393 aaPredicted RBP7.25□□□□□ -1.25
VPS11-204ENST00000530809 FAM161AQ3B820 660 aa7.25□□□□□ -1.25
VPS11-204ENST00000530809 AKAP4Q5JQC9 854 aa7.25□□□□□ -1.25
VPS11-204ENST00000530809 AMER1Q5JTC6 1135 aaPredicted RBP7.25□□□□□ -1.25
VPS11-204ENST00000530809 ZNF622Q969S3 477 aaKnown RBP eCLIP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms