RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 BMP1P13497 986 aa10.67□□□□□ -0.7
CASP4-208ENST00000530309 SERPINB4P48594 390 aa10.67□□□□□ -0.7
CASP4-208ENST00000530309 POTEAQ6S8J7 498 aa10.67□□□□□ -0.7
CASP4-208ENST00000530309 RHBDD1Q8TEB9 315 aa10.67□□□□□ -0.7
CASP4-208ENST00000530309 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.67□□□□□ -0.7
CASP4-208ENST00000530309 CABP1Q9NZU7 370 aa10.67□□□□□ -0.7
CASP4-208ENST00000530309 SEPT3Q9UH03 358 aa10.67□□□□□ -0.7
CASP4-208ENST00000530309 NOS2P35228 1153 aa10.66□□□□□ -0.7
CASP4-208ENST00000530309 GNASQ5JWF2 1037 aa10.66□□□□□ -0.7
CASP4-208ENST00000530309 TRIM46Q7Z4K8 759 aa10.66□□□□□ -0.7
CASP4-208ENST00000530309 ZDHHC1Q8WTX9 485 aa10.66□□□□□ -0.7
CASP4-208ENST00000530309 EML1O00423 815 aa10.65□□□□□ -0.7
CASP4-208ENST00000530309 HIRAP54198 1017 aaPredicted RBP10.65□□□□□ -0.7
CASP4-208ENST00000530309 L3MBTL2Q969R5 705 aa10.65□□□□□ -0.7
CASP4-208ENST00000530309 ZNF232Q9UNY5 417 aa10.65□□□□□ -0.7
CASP4-208ENST00000530309 SPATA31C2B4DYI2 1134 aa10.64□□□□□ -0.71
CASP4-208ENST00000530309 NAA30Q147X3 362 aaPredicted RBP10.64□□□□□ -0.71
CASP4-208ENST00000530309 RNF217Q8TC41 542 aa10.64□□□□□ -0.71
CASP4-208ENST00000530309 GTF3C2Q8WUA4 911 aaPredicted RBP10.64□□□□□ -0.71
CASP4-208ENST00000530309 EGFL7Q9UHF1 273 aa10.64□□□□□ -0.71
CASP4-208ENST00000530309 TTLL8A6PVC2 850 aa10.63□□□□□ -0.71
CASP4-208ENST00000530309 ABL1P00519 1130 aa10.63□□□□□ -0.71
CASP4-208ENST00000530309 C4orf17Q53FE4 359 aa10.63□□□□□ -0.71
CASP4-208ENST00000530309 SND1Q7KZF4 910 aaKnown RBP eCLIP10.63□□□□□ -0.71
CASP4-208ENST00000530309 PARP3Q9Y6F1 533 aa10.63□□□□□ -0.71
CASP4-208ENST00000530309 SOWAHDA6NJG2 315 aa10.62□□□□□ -0.71
CASP4-208ENST00000530309 SH3PXD2AQ5TCZ1 1133 aa10.62□□□□□ -0.71
CASP4-208ENST00000530309 TMCO4Q5TGY1 634 aa10.62□□□□□ -0.71
CASP4-208ENST00000530309 LYSMD3Q7Z3D4 306 aa10.62□□□□□ -0.71
CASP4-208ENST00000530309 PRICKLE2Q7Z3G6 844 aa10.62□□□□□ -0.71
CASP4-208ENST00000530309 ZFP42Q96MM3 310 aa10.62□□□□□ -0.71
CASP4-208ENST00000530309 IRX2Q9BZI1 471 aaPredicted RBP10.62□□□□□ -0.71
CASP4-208ENST00000530309 AAASQ9NRG9 546 aa10.62□□□□□ -0.71
CASP4-208ENST00000530309 SOS2Q07890 1332 aaPredicted RBP10.61□□□□□ -0.71
CASP4-208ENST00000530309 POU4F2Q12837 409 aa10.61□□□□□ -0.71
CASP4-208ENST00000530309 C16orf46Q6P387 395 aa10.61□□□□□ -0.71
CASP4-208ENST00000530309 HCN4Q9Y3Q4 1203 aa10.61□□□□□ -0.71
CASP4-208ENST00000530309 DNMT3AQ9Y6K1 912 aaPredicted RBP10.61□□□□□ -0.71
CASP4-208ENST00000530309 ST8SIA5O15466 376 aa10.6□□□□□ -0.71
CASP4-208ENST00000530309 PLA2G4AP47712 749 aa10.6□□□□□ -0.71
CASP4-208ENST00000530309 ZNF211Q13398 564 aaPredicted RBP10.6□□□□□ -0.71
CASP4-208ENST00000530309 WDR44Q5JSH3 913 aa10.6□□□□□ -0.71
CASP4-208ENST00000530309 NBPF10Q6P3W6 841 aaKnown RBP10.6□□□□□ -0.71
CASP4-208ENST00000530309 HELQQ8TDG4 1101 aa10.6□□□□□ -0.71
CASP4-208ENST00000530309 QTRT2Q9H974 415 aaKnown RBP10.6□□□□□ -0.71
CASP4-208ENST00000530309 ATP13A2Q9NQ11 1180 aa10.6□□□□□ -0.71
CASP4-208ENST00000530309 ICMTO60725 284 aa10.59□□□□□ -0.71
CASP4-208ENST00000530309 FKBP4Q02790 459 aaKnown RBP eCLIP10.59□□□□□ -0.71
CASP4-208ENST00000530309 SF3B2Q13435 895 aaKnown RBP10.59□□□□□ -0.71
CASP4-208ENST00000530309 ALDH16A1Q8IZ83 802 aa10.59□□□□□ -0.71
CASP4-208ENST00000530309 SAP130Q9H0E3 1048 aa10.59□□□□□ -0.71
CASP4-208ENST00000530309 ANO2Q9NQ90 1003 aa10.59□□□□□ -0.71
CASP4-208ENST00000530309 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
CASP4-208ENST00000530309 FIGNL2A6NMB9 653 aa10.58□□□□□ -0.72
CASP4-208ENST00000530309 PHKA2P46019 1235 aa10.58□□□□□ -0.72
CASP4-208ENST00000530309 COX20Q5RI15 118 aa10.58□□□□□ -0.72
CASP4-208ENST00000530309 C1orf53Q5VUE5 145 aa10.58□□□□□ -0.72
CASP4-208ENST00000530309 MYO19Q96H55 970 aa10.58□□□□□ -0.72
CASP4-208ENST00000530309 NGLY1Q96IV0 654 aa10.58□□□□□ -0.72
CASP4-208ENST00000530309 H3BRB1 525 aa10.57□□□□□ -0.72
CASP4-208ENST00000530309 MTMR3Q13615 1198 aa10.57□□□□□ -0.72
CASP4-208ENST00000530309 NBPF1Q3BBV0 1214 aa10.57□□□□□ -0.72
CASP4-208ENST00000530309 AIDAQ96BJ3 306 aa10.57□□□□□ -0.72
CASP4-208ENST00000530309 PHACTR1Q9C0D0 580 aa10.57□□□□□ -0.72
CASP4-208ENST00000530309 TUT1Q9H6E5 874 aaKnown RBP10.57□□□□□ -0.72
CASP4-208ENST00000530309 TXLNAP40222 546 aa10.56□□□□□ -0.72
CASP4-208ENST00000530309 RTN1Q16799 776 aa10.56□□□□□ -0.72
CASP4-208ENST00000530309 GLYCTKQ8IVS8 523 aa10.56□□□□□ -0.72
CASP4-208ENST00000530309 ZDHHC3Q9NYG2 299 aa10.56□□□□□ -0.72
CASP4-208ENST00000530309 DACH1Q9UI36 760 aa10.56□□□□□ -0.72
CASP4-208ENST00000530309 RHOQP17081 205 aa10.55□□□□□ -0.72
CASP4-208ENST00000530309 TIMMDC1Q9NPL8 285 aa10.55□□□□□ -0.72
CASP4-208ENST00000530309 BIN2Q9UBW5 565 aaPredicted RBP10.55□□□□□ -0.72
CASP4-208ENST00000530309 DNMT3LQ9UJW3 386 aa10.55□□□□□ -0.72
CASP4-208ENST00000530309 LRFN2Q9ULH4 789 aa10.55□□□□□ -0.72
CASP4-208ENST00000530309 MFAP1P55081 439 aaKnown RBP10.54□□□□□ -0.72
CASP4-208ENST00000530309 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
CASP4-208ENST00000530309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.54□□□□□ -0.72
CASP4-208ENST00000530309 TNFRSF10BO14763 440 aa10.53□□□□□ -0.72
CASP4-208ENST00000530309 NPR3P17342 541 aa10.53□□□□□ -0.72
CASP4-208ENST00000530309 TATP17735 454 aaPredicted RBP10.53□□□□□ -0.72
CASP4-208ENST00000530309 STIM2Q9P246 746 aa10.53□□□□□ -0.72
CASP4-208ENST00000530309 A0A1B0GTH6 734 aa10.52□□□□□ -0.73
CASP4-208ENST00000530309 MAN1A2O60476 641 aa10.52□□□□□ -0.73
CASP4-208ENST00000530309 FAM13AO94988 1023 aa10.52□□□□□ -0.73
CASP4-208ENST00000530309 ECM1Q16610 540 aa10.52□□□□□ -0.73
CASP4-208ENST00000530309 C11orf91Q3C1V1 193 aa10.52□□□□□ -0.73
CASP4-208ENST00000530309 C7orf43Q8WVR3 580 aa10.52□□□□□ -0.73
CASP4-208ENST00000530309 BRD2P25440 801 aaKnown RBP10.51□□□□□ -0.73
CASP4-208ENST00000530309 DGKZQ13574 1117 aa10.51□□□□□ -0.73
CASP4-208ENST00000530309 RHPN1Q8TCX5 695 aa10.51□□□□□ -0.73
CASP4-208ENST00000530309 ATP4AP20648 1035 aa10.5□□□□□ -0.73
CASP4-208ENST00000530309 MPSTP25325 297 aa10.5□□□□□ -0.73
CASP4-208ENST00000530309 MSX1P28360 303 aa10.5□□□□□ -0.73
CASP4-208ENST00000530309 SENP2Q9HC62 589 aa10.5□□□□□ -0.73
CASP4-208ENST00000530309 KLK14Q9P0G3 267 aa10.5□□□□□ -0.73
CASP4-208ENST00000530309 GPC6Q9Y625 555 aaPredicted RBP10.5□□□□□ -0.73
CASP4-208ENST00000530309 KIFC2Q96AC6 838 aa10.49□□□□□ -0.73
CASP4-208ENST00000530309 DYRK1BQ9Y463 629 aa10.49□□□□□ -0.73
CASP4-208ENST00000530309 ARHGAP4P98171 946 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms