RNA–Protein interactions for RNA: ENST00000530302.1

CLINT1-209, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-209ENST00000530302 RRP7AQ9Y3A4 280 aaKnown RBP9.71□□□□□ -0.86
CLINT1-209ENST00000530302 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
CLINT1-209ENST00000530302 SSFA2P28290 1259 aa9.7□□□□□ -0.86
CLINT1-209ENST00000530302 INTS5Q6P9B9 1019 aaKnown RBP9.7□□□□□ -0.86
CLINT1-209ENST00000530302 ZNF790Q6PG37 636 aa9.7□□□□□ -0.86
CLINT1-209ENST00000530302 MIS18AQ9NYP9 233 aa9.7□□□□□ -0.86
CLINT1-209ENST00000530302 MAPK8IP3Q9UPT6 1336 aa9.7□□□□□ -0.86
CLINT1-209ENST00000530302 HEG1Q9ULI3 1381 aa9.7□□□□□ -0.86
CLINT1-209ENST00000530302 LAMB4A4D0S4 1761 aa9.69□□□□□ -0.86
CLINT1-209ENST00000530302 BTBD11A6QL63 1104 aa9.69□□□□□ -0.86
CLINT1-209ENST00000530302 ZBTB22O15209 634 aa9.69□□□□□ -0.86
CLINT1-209ENST00000530302 CYP19A1P11511 503 aaPredicted RBP9.69□□□□□ -0.86
CLINT1-209ENST00000530302 TMPOP42166 694 aaKnown RBP9.69□□□□□ -0.86
CLINT1-209ENST00000530302 WDR43Q15061 677 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLINT1-209ENST00000530302 SLC16A10Q8TF71 515 aa9.69□□□□□ -0.86
CLINT1-209ENST00000530302 RTF1Q92541 710 aaKnown RBP9.69□□□□□ -0.86
CLINT1-209ENST00000530302 ZBTB1Q9Y2K1 713 aa9.69□□□□□ -0.86
CLINT1-209ENST00000530302 GOLGB1Q14789 3259 aaKnown RBP9.69□□□□□ -0.86
CLINT1-209ENST00000530302 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
CLINT1-209ENST00000530302 HTATSF1O43719 755 aaKnown RBP9.68□□□□□ -0.86
CLINT1-209ENST00000530302 RPS6KA4O75676 772 aa9.68□□□□□ -0.86
CLINT1-209ENST00000530302 RC3H1Q5TC82 1133 aaKnown RBP9.68□□□□□ -0.86
CLINT1-209ENST00000530302 TTC5Q8N0Z6 440 aa9.68□□□□□ -0.86
CLINT1-209ENST00000530302 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
CLINT1-209ENST00000530302 PPP1R1BQ9UD71 204 aaPredicted RBP9.68□□□□□ -0.86
CLINT1-209ENST00000530302 SOS1Q07889 1333 aaPredicted RBP9.67□□□□□ -0.86
CLINT1-209ENST00000530302 C19orf67A6NJJ6 358 aa9.67□□□□□ -0.86
CLINT1-209ENST00000530302 RIPK4P57078 832 aa9.67□□□□□ -0.86
CLINT1-209ENST00000530302 NEUROD2Q15784 382 aa9.67□□□□□ -0.86
CLINT1-209ENST00000530302 VSIG10Q8N0Z9 540 aa9.67□□□□□ -0.86
CLINT1-209ENST00000530302 ARHGEF1Q92888 912 aaKnown RBP9.67□□□□□ -0.86
CLINT1-209ENST00000530302 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
CLINT1-209ENST00000530302 ARXQ96QS3 562 aa9.67□□□□□ -0.86
CLINT1-209ENST00000530302 CCDC87Q9NVE4 849 aa9.67□□□□□ -0.86
CLINT1-209ENST00000530302 SRP68Q9UHB9 627 aaKnown RBP9.67□□□□□ -0.86
CLINT1-209ENST00000530302 TRIM35Q9UPQ4 493 aa9.67□□□□□ -0.86
CLINT1-209ENST00000530302 RTCBQ9Y3I0 505 aaKnown RBP9.67□□□□□ -0.86
CLINT1-209ENST00000530302 SCN7AQ01118 1682 aa9.67□□□□□ -0.86
CLINT1-209ENST00000530302 KIAA1551Q9HCM1 1747 aa9.66□□□□□ -0.86
CLINT1-209ENST00000530302 ANP32CO43423 234 aa9.66□□□□□ -0.86
CLINT1-209ENST00000530302 NEFMP07197 916 aa9.66□□□□□ -0.86
CLINT1-209ENST00000530302 PIP4K2AP48426 406 aaPredicted RBP9.66□□□□□ -0.86
CLINT1-209ENST00000530302 FLAD1Q8NFF5 587 aa9.66□□□□□ -0.86
CLINT1-209ENST00000530302 FMNL2Q96PY5 1086 aa9.66□□□□□ -0.86
CLINT1-209ENST00000530302 COL15A1P39059 1388 aa9.65□□□□□ -0.86
CLINT1-209ENST00000530302 USP42Q9H9J4 1324 aaKnown RBP9.65□□□□□ -0.86
CLINT1-209ENST00000530302 GYS1P13807 737 aa9.65□□□□□ -0.86
CLINT1-209ENST00000530302 CANXP27824 592 aaKnown RBP9.65□□□□□ -0.86
CLINT1-209ENST00000530302 TAF7Q15545 349 aaPredicted RBP9.65□□□□□ -0.86
CLINT1-209ENST00000530302 TRAPPC3LQ5T215 181 aa9.65□□□□□ -0.86
CLINT1-209ENST00000530302 NLGN2Q8NFZ4 835 aa9.65□□□□□ -0.86
CLINT1-209ENST00000530302 PNISRQ8TF01 805 aaKnown RBP9.65□□□□□ -0.86
CLINT1-209ENST00000530302 SYT17Q9BSW7 474 aa9.65□□□□□ -0.86
CLINT1-209ENST00000530302 PNNQ9H307 717 aaKnown RBP9.65□□□□□ -0.86
CLINT1-209ENST00000530302 MRS2Q9HD23 443 aa9.65□□□□□ -0.86
CLINT1-209ENST00000530302 USP16Q9Y5T5 823 aa9.65□□□□□ -0.86
CLINT1-209ENST00000530302 UTRNP46939 3433 aa9.65□□□□□ -0.86
CLINT1-209ENST00000530302 BCORQ6W2J9 1755 aa9.65□□□□□ -0.87
CLINT1-209ENST00000530302 KIF13BQ9NQT8 1826 aa9.64□□□□□ -0.87
CLINT1-209ENST00000530302 APAF1O14727 1248 aa9.64□□□□□ -0.87
CLINT1-209ENST00000530302 A1BGP04217 495 aa9.64□□□□□ -0.87
CLINT1-209ENST00000530302 MMP10P09238 476 aa9.64□□□□□ -0.87
CLINT1-209ENST00000530302 POLD1P28340 1107 aa9.64□□□□□ -0.87
CLINT1-209ENST00000530302 FKBP8Q14318 412 aa9.64□□□□□ -0.87
CLINT1-209ENST00000530302 KLHL34Q8N239 644 aa9.64□□□□□ -0.87
CLINT1-209ENST00000530302 AFDNP55196 1824 aaKnown RBP9.63□□□□□ -0.87
CLINT1-209ENST00000530302 NBPF26B4DH59 902 aa9.63□□□□□ -0.87
CLINT1-209ENST00000530302 HMGB2P26583 209 aaKnown RBP9.63□□□□□ -0.87
CLINT1-209ENST00000530302 RFC4P35249 363 aa9.63□□□□□ -0.87
CLINT1-209ENST00000530302 EIF5P55010 431 aaKnown RBP9.63□□□□□ -0.87
CLINT1-209ENST00000530302 EIF4A1P60842 406 aaKnown RBP9.63□□□□□ -0.87
CLINT1-209ENST00000530302 DDR1Q08345 913 aa9.63□□□□□ -0.87
CLINT1-209ENST00000530302 KRT24Q2M2I5 525 aa9.63□□□□□ -0.87
CLINT1-209ENST00000530302 NBPF10Q6P3W6 841 aaKnown RBP9.63□□□□□ -0.87
CLINT1-209ENST00000530302 NBPF15Q8N660 670 aa9.63□□□□□ -0.87
CLINT1-209ENST00000530302 BCL2L12Q9HB09 334 aa9.63□□□□□ -0.87
CLINT1-209ENST00000530302 SNRPA1P09661 255 aaKnown RBP9.62□□□□□ -0.87
CLINT1-209ENST00000530302 USPL1Q5W0Q7 1092 aa9.62□□□□□ -0.87
CLINT1-209ENST00000530302 ZNF330Q9Y3S2 320 aaPredicted RBP9.62□□□□□ -0.87
CLINT1-209ENST00000530302 N4BP2Q86UW6 1770 aaPredicted RBP9.62□□□□□ -0.87
CLINT1-209ENST00000530302 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
CLINT1-209ENST00000530302 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
CLINT1-209ENST00000530302 STARD3NLO95772 234 aa9.61□□□□□ -0.87
CLINT1-209ENST00000530302 LMOD3Q0VAK6 560 aa9.61□□□□□ -0.87
CLINT1-209ENST00000530302 TSPYL4Q9UJ04 414 aa9.61□□□□□ -0.87
CLINT1-209ENST00000530302 C10orf71Q711Q0 1435 aa9.61□□□□□ -0.87
CLINT1-209ENST00000530302 BRCA1P38398 1863 aaKnown RBP9.6□□□□□ -0.87
CLINT1-209ENST00000530302 CHL1O00533 1208 aa9.6□□□□□ -0.87
CLINT1-209ENST00000530302 TEX13AQ9BXU3 409 aaPredicted RBP9.6□□□□□ -0.87
CLINT1-209ENST00000530302 NARFQ9UHQ1 456 aa9.6□□□□□ -0.87
CLINT1-209ENST00000530302 TBC1D2BQ9UPU7 963 aa9.6□□□□□ -0.87
CLINT1-209ENST00000530302 PXDNLA1KZ92 1463 aa9.59□□□□□ -0.87
CLINT1-209ENST00000530302 ANKRD31Q8N7Z5 1873 aa9.59□□□□□ -0.87
CLINT1-209ENST00000530302 POLRMTO00411 1230 aaKnown RBP9.59□□□□□ -0.87
CLINT1-209ENST00000530302 CAMTA2O94983 1202 aa9.59□□□□□ -0.87
CLINT1-209ENST00000530302 IL6STP40189 918 aaPredicted RBP9.59□□□□□ -0.87
CLINT1-209ENST00000530302 NFIXQ14938 502 aa9.59□□□□□ -0.87
CLINT1-209ENST00000530302 PROSER3Q2NL68 480 aa9.59□□□□□ -0.87
CLINT1-209ENST00000530302 NLGN1Q8N2Q7 840 aa9.59□□□□□ -0.87
CLINT1-209ENST00000530302 MBIPQ9NS73 344 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms