RNA–Protein interactions for RNA: ENST00000529904.2

SNRNP35-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-206ENST00000529904 MIS18AQ9NYP9 233 aa16.57■□□□□ 0.24
SNRNP35-206ENST00000529904 MYH14Q7Z406 1995 aaKnown RBP16.56■□□□□ 0.24
SNRNP35-206ENST00000529904 SNRPA1P09661 255 aaKnown RBP16.55■□□□□ 0.24
SNRNP35-206ENST00000529904 KLHL34Q8N239 644 aa16.55■□□□□ 0.24
SNRNP35-206ENST00000529904 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
SNRNP35-206ENST00000529904 ZBTB1Q9Y2K1 713 aa16.55■□□□□ 0.24
SNRNP35-206ENST00000529904 COL24A1Q17RW2 1714 aa16.55■□□□□ 0.24
SNRNP35-206ENST00000529904 APAF1O14727 1248 aa16.54■□□□□ 0.24
SNRNP35-206ENST00000529904 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
SNRNP35-206ENST00000529904 SOS1Q07889 1333 aaPredicted RBP16.53■□□□□ 0.24
SNRNP35-206ENST00000529904 NLGN1Q8N2Q7 840 aa16.53■□□□□ 0.24
SNRNP35-206ENST00000529904 TSPYL4Q9UJ04 414 aa16.53■□□□□ 0.24
SNRNP35-206ENST00000529904 ZPR1O75312 459 aa16.52■□□□□ 0.24
SNRNP35-206ENST00000529904 NPM2Q86SE8 214 aaKnown RBP16.52■□□□□ 0.24
SNRNP35-206ENST00000529904 SYT17Q9BSW7 474 aa16.52■□□□□ 0.24
SNRNP35-206ENST00000529904 TRIM35Q9UPQ4 493 aa16.52■□□□□ 0.24
SNRNP35-206ENST00000529904 ZNF330Q9Y3S2 320 aaPredicted RBP16.52■□□□□ 0.24
SNRNP35-206ENST00000529904 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
SNRNP35-206ENST00000529904 C4AP0C0L4 1744 aa16.52■□□□□ 0.24
SNRNP35-206ENST00000529904 COL15A1P39059 1388 aa16.51■□□□□ 0.23
SNRNP35-206ENST00000529904 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
SNRNP35-206ENST00000529904 USP42Q9H9J4 1324 aaKnown RBP16.51■□□□□ 0.23
SNRNP35-206ENST00000529904 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
SNRNP35-206ENST00000529904 GYS1P13807 737 aa16.51■□□□□ 0.23
SNRNP35-206ENST00000529904 SRP68Q9UHB9 627 aaKnown RBP16.51■□□□□ 0.23
SNRNP35-206ENST00000529904 A1BGP04217 495 aa16.5■□□□□ 0.23
SNRNP35-206ENST00000529904 EIF4A1P60842 406 aaKnown RBP16.5■□□□□ 0.23
SNRNP35-206ENST00000529904 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
SNRNP35-206ENST00000529904 LAS1LQ9Y4W2 734 aaKnown RBP16.5■□□□□ 0.23
SNRNP35-206ENST00000529904 A0A087WZG4 1122 aa16.49■□□□□ 0.23
SNRNP35-206ENST00000529904 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
SNRNP35-206ENST00000529904 MMP10P09238 476 aa16.49■□□□□ 0.23
SNRNP35-206ENST00000529904 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
SNRNP35-206ENST00000529904 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
SNRNP35-206ENST00000529904 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
SNRNP35-206ENST00000529904 USPL1Q5W0Q7 1092 aa16.48■□□□□ 0.23
SNRNP35-206ENST00000529904 CALD1Q05682 793 aaKnown RBP16.47■□□□□ 0.23
SNRNP35-206ENST00000529904 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
SNRNP35-206ENST00000529904 NARFQ9UHQ1 456 aa16.47■□□□□ 0.23
SNRNP35-206ENST00000529904 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
SNRNP35-206ENST00000529904 FKBP8Q14318 412 aa16.46■□□□□ 0.23
SNRNP35-206ENST00000529904 PARP3Q9Y6F1 533 aa16.46■□□□□ 0.23
SNRNP35-206ENST00000529904 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.22
SNRNP35-206ENST00000529904 SENP3-EIF4A1A0A087X0R7 540 aa16.45■□□□□ 0.22
SNRNP35-206ENST00000529904 CHL1O00533 1208 aa16.45■□□□□ 0.22
SNRNP35-206ENST00000529904 TBC1D2BQ9UPU7 963 aa16.45■□□□□ 0.22
SNRNP35-206ENST00000529904 CD2APQ9Y5K6 639 aa16.45■□□□□ 0.22
SNRNP35-206ENST00000529904 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
SNRNP35-206ENST00000529904 GNAI1P63096 354 aa16.43■□□□□ 0.22
SNRNP35-206ENST00000529904 DZIP3Q86Y13 1208 aaKnown RBP16.43■□□□□ 0.22
SNRNP35-206ENST00000529904 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
SNRNP35-206ENST00000529904 NBPF26B4DH59 902 aa16.42■□□□□ 0.22
SNRNP35-206ENST00000529904 NBPF10Q6P3W6 841 aaKnown RBP16.42■□□□□ 0.22
SNRNP35-206ENST00000529904 NBPF15Q8N660 670 aa16.42■□□□□ 0.22
SNRNP35-206ENST00000529904 IFT57Q9NWB7 429 aa16.42■□□□□ 0.22
SNRNP35-206ENST00000529904 EIF2S2P20042 333 aaKnown RBP16.41■□□□□ 0.22
SNRNP35-206ENST00000529904 TM4SF1P30408 202 aa16.41■□□□□ 0.22
SNRNP35-206ENST00000529904 CCDC27Q2M243 656 aa16.41■□□□□ 0.22
SNRNP35-206ENST00000529904 BICDL1Q6ZP65 573 aa16.41■□□□□ 0.22
SNRNP35-206ENST00000529904 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
SNRNP35-206ENST00000529904 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
SNRNP35-206ENST00000529904 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
SNRNP35-206ENST00000529904 MYL6BP14649 208 aa16.4■□□□□ 0.22
SNRNP35-206ENST00000529904 DDR1Q08345 913 aa16.4■□□□□ 0.22
SNRNP35-206ENST00000529904 NFIXQ14938 502 aa16.4■□□□□ 0.22
SNRNP35-206ENST00000529904 PELP1Q8IZL8 1130 aaKnown RBP16.4■□□□□ 0.22
SNRNP35-206ENST00000529904 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
SNRNP35-206ENST00000529904 SCN7AQ01118 1682 aa16.4■□□□□ 0.22
SNRNP35-206ENST00000529904 POLRMTO00411 1230 aaKnown RBP16.39■□□□□ 0.21
SNRNP35-206ENST00000529904 ZNF853P0CG23 659 aa16.39■□□□□ 0.21
SNRNP35-206ENST00000529904 GPR162Q16538 588 aa16.39■□□□□ 0.21
SNRNP35-206ENST00000529904 KRT24Q2M2I5 525 aa16.39■□□□□ 0.21
SNRNP35-206ENST00000529904 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
SNRNP35-206ENST00000529904 WWC1Q8IX03 1113 aa16.39■□□□□ 0.21
SNRNP35-206ENST00000529904 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
SNRNP35-206ENST00000529904 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
SNRNP35-206ENST00000529904 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
SNRNP35-206ENST00000529904 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
SNRNP35-206ENST00000529904 NECTIN2Q92692 538 aa16.38■□□□□ 0.21
SNRNP35-206ENST00000529904 C10orf71Q711Q0 1435 aa16.37■□□□□ 0.21
SNRNP35-206ENST00000529904 CCER2I3L3R5 266 aa16.37■□□□□ 0.21
SNRNP35-206ENST00000529904 SERPINB2P05120 415 aa16.37■□□□□ 0.21
SNRNP35-206ENST00000529904 TBC1D9BQ66K14 1250 aa16.37■□□□□ 0.21
SNRNP35-206ENST00000529904 BCORQ6W2J9 1755 aa16.36■□□□□ 0.21
SNRNP35-206ENST00000529904 HOXB7P09629 217 aa16.36■□□□□ 0.21
SNRNP35-206ENST00000529904 TGFB2P61812 414 aa16.36■□□□□ 0.21
SNRNP35-206ENST00000529904 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
SNRNP35-206ENST00000529904 DUSP27Q5VZP5 1158 aa16.36■□□□□ 0.21
SNRNP35-206ENST00000529904 CLEC4GQ6UXB4 293 aa16.36■□□□□ 0.21
SNRNP35-206ENST00000529904 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
SNRNP35-206ENST00000529904 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
SNRNP35-206ENST00000529904 CARMIL3Q8ND23 1372 aa16.36■□□□□ 0.21
SNRNP35-206ENST00000529904 NPHP1O15259 732 aa16.35■□□□□ 0.21
SNRNP35-206ENST00000529904 IL16Q14005 1332 aa16.35■□□□□ 0.21
SNRNP35-206ENST00000529904 KIF13BQ9NQT8 1826 aa16.34■□□□□ 0.21
SNRNP35-206ENST00000529904 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
SNRNP35-206ENST00000529904 RGL2O15211 777 aa16.34■□□□□ 0.21
SNRNP35-206ENST00000529904 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 ERVV-1B6SEH8 477 aa16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 ANXA1P04083 346 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms