RNA–Protein interactions for RNA: ENST00000529854.1

GSDMD-209, Transcript of gasdermin D, humanhuman

TSL 4

Gene GSDMD, Length 511 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-209ENST00000529854 PRAMEF22A3QJZ6 481 aa22.42■■□□□ 1.18
GSDMD-209ENST00000529854 ADRA2BP18089 450 aa22.42■■□□□ 1.18
GSDMD-209ENST00000529854 KLHL34Q8N239 644 aa22.42■■□□□ 1.18
GSDMD-209ENST00000529854 KDM3BQ7LBC6 1761 aa22.41■■□□□ 1.18
GSDMD-209ENST00000529854 SOS1Q07889 1333 aaPredicted RBP22.41■■□□□ 1.18
GSDMD-209ENST00000529854 RFC4P35249 363 aa22.41■■□□□ 1.18
GSDMD-209ENST00000529854 CANXP27824 592 aaKnown RBP22.4■■□□□ 1.18
GSDMD-209ENST00000529854 SRP68Q9UHB9 627 aaKnown RBP22.4■■□□□ 1.18
GSDMD-209ENST00000529854 STARD3NLO95772 234 aa22.39■■□□□ 1.17
GSDMD-209ENST00000529854 LMOD3Q0VAK6 560 aa22.39■■□□□ 1.17
GSDMD-209ENST00000529854 SYT17Q9BSW7 474 aa22.39■■□□□ 1.17
GSDMD-209ENST00000529854 TRIM35Q9UPQ4 493 aa22.39■■□□□ 1.17
GSDMD-209ENST00000529854 APAF1O14727 1248 aa22.38■■□□□ 1.17
GSDMD-209ENST00000529854 PNISRQ8TF01 805 aaKnown RBP22.38■■□□□ 1.17
GSDMD-209ENST00000529854 TEX13AQ9BXU3 409 aaPredicted RBP22.38■■□□□ 1.17
GSDMD-209ENST00000529854 USP16Q9Y5T5 823 aa22.38■■□□□ 1.17
GSDMD-209ENST00000529854 COL15A1P39059 1388 aa22.38■■□□□ 1.17
GSDMD-209ENST00000529854 A1BGP04217 495 aa22.37■■□□□ 1.17
GSDMD-209ENST00000529854 GYS1P13807 737 aa22.37■■□□□ 1.17
GSDMD-209ENST00000529854 USP42Q9H9J4 1324 aaKnown RBP22.36■■□□□ 1.17
GSDMD-209ENST00000529854 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
GSDMD-209ENST00000529854 SNRPA1P09661 255 aaKnown RBP22.36■■□□□ 1.17
GSDMD-209ENST00000529854 PIP4K2AP48426 406 aaPredicted RBP22.36■■□□□ 1.17
GSDMD-209ENST00000529854 TSPYL4Q9UJ04 414 aa22.35■■□□□ 1.17
GSDMD-209ENST00000529854 ZNF330Q9Y3S2 320 aaPredicted RBP22.35■■□□□ 1.17
GSDMD-209ENST00000529854 MMP10P09238 476 aa22.34■■□□□ 1.17
GSDMD-209ENST00000529854 EIF4A1P60842 406 aaKnown RBP22.34■■□□□ 1.17
GSDMD-209ENST00000529854 EIF5P55010 431 aaKnown RBP22.33■■□□□ 1.17
GSDMD-209ENST00000529854 FKBP8Q14318 412 aa22.33■■□□□ 1.17
GSDMD-209ENST00000529854 USPL1Q5W0Q7 1092 aa22.33■■□□□ 1.17
GSDMD-209ENST00000529854 NLGN1Q8N2Q7 840 aa22.32■■□□□ 1.16
GSDMD-209ENST00000529854 NLGN2Q8NFZ4 835 aa22.32■■□□□ 1.16
GSDMD-209ENST00000529854 LAMB4A4D0S4 1761 aa22.31■■□□□ 1.16
GSDMD-209ENST00000529854 ZPR1O75312 459 aa22.31■■□□□ 1.16
GSDMD-209ENST00000529854 NARFQ9UHQ1 456 aa22.31■■□□□ 1.16
GSDMD-209ENST00000529854 LAS1LQ9Y4W2 734 aaKnown RBP22.31■■□□□ 1.16
GSDMD-209ENST00000529854 GIGYF1O75420 1035 aaPredicted RBP22.3■■□□□ 1.16
GSDMD-209ENST00000529854 IL6STP40189 918 aaPredicted RBP22.3■■□□□ 1.16
GSDMD-209ENST00000529854 NBPF26B4DH59 902 aa22.28■■□□□ 1.16
GSDMD-209ENST00000529854 NBPF10Q6P3W6 841 aaKnown RBP22.28■■□□□ 1.16
GSDMD-209ENST00000529854 NBPF15Q8N660 670 aa22.28■■□□□ 1.16
GSDMD-209ENST00000529854 BCL2L12Q9HB09 334 aa22.28■■□□□ 1.16
GSDMD-209ENST00000529854 TBC1D2BQ9UPU7 963 aa22.28■■□□□ 1.16
GSDMD-209ENST00000529854 A0A087WZG4 1122 aa22.27■■□□□ 1.16
GSDMD-209ENST00000529854 DDR1Q08345 913 aa22.27■■□□□ 1.16
GSDMD-209ENST00000529854 BABAM1Q9NWV8 329 aa22.27■■□□□ 1.16
GSDMD-209ENST00000529854 CHL1O00533 1208 aa22.26■■□□□ 1.15
GSDMD-209ENST00000529854 FAM9BQ8IZU0 186 aa22.26■■□□□ 1.15
GSDMD-209ENST00000529854 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
GSDMD-209ENST00000529854 NPM2Q86SE8 214 aaKnown RBP22.25■■□□□ 1.15
GSDMD-209ENST00000529854 CD2APQ9Y5K6 639 aa22.25■■□□□ 1.15
GSDMD-209ENST00000529854 PARP3Q9Y6F1 533 aa22.25■■□□□ 1.15
GSDMD-209ENST00000529854 SCN7AQ01118 1682 aa22.25■■□□□ 1.15
GSDMD-209ENST00000529854 TM4SF1P30408 202 aa22.23■■□□□ 1.15
GSDMD-209ENST00000529854 NFIXQ14938 502 aa22.23■■□□□ 1.15
GSDMD-209ENST00000529854 DZIP3Q86Y13 1208 aaKnown RBP22.23■■□□□ 1.15
GSDMD-209ENST00000529854 POLRMTO00411 1230 aaKnown RBP22.22■■□□□ 1.15
GSDMD-209ENST00000529854 CAMTA2O94983 1202 aa22.22■■□□□ 1.15
GSDMD-209ENST00000529854 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
GSDMD-209ENST00000529854 PELP1Q8IZL8 1130 aaKnown RBP22.22■■□□□ 1.15
GSDMD-209ENST00000529854 CFAP44Q96MT7 982 aa22.22■■□□□ 1.15
GSDMD-209ENST00000529854 C10orf71Q711Q0 1435 aa22.22■■□□□ 1.15
GSDMD-209ENST00000529854 BCORQ6W2J9 1755 aa22.21■■□□□ 1.15
GSDMD-209ENST00000529854 EIF2S2P20042 333 aaKnown RBP22.21■■□□□ 1.15
GSDMD-209ENST00000529854 NGEFQ8N5V2 710 aa22.21■■□□□ 1.15
GSDMD-209ENST00000529854 MBIPQ9NS73 344 aa22.21■■□□□ 1.15
GSDMD-209ENST00000529854 WWC3Q9ULE0 1092 aa22.21■■□□□ 1.15
GSDMD-209ENST00000529854 DCAF8L1A6NGE4 600 aa22.2■■□□□ 1.14
GSDMD-209ENST00000529854 ZNF853P0CG23 659 aa22.2■■□□□ 1.14
GSDMD-209ENST00000529854 MYL6BP14649 208 aa22.2■■□□□ 1.14
GSDMD-209ENST00000529854 TBC1D9BQ66K14 1250 aa22.2■■□□□ 1.14
GSDMD-209ENST00000529854 NECTIN2Q92692 538 aa22.2■■□□□ 1.14
GSDMD-209ENST00000529854 SALL2Q9Y467 1007 aaPredicted RBP22.2■■□□□ 1.14
GSDMD-209ENST00000529854 IFT57Q9NWB7 429 aa22.19■■□□□ 1.14
GSDMD-209ENST00000529854 KIF13BQ9NQT8 1826 aa22.19■■□□□ 1.14
GSDMD-209ENST00000529854 CALD1Q05682 793 aaKnown RBP22.18■■□□□ 1.14
GSDMD-209ENST00000529854 GPR162Q16538 588 aa22.18■■□□□ 1.14
GSDMD-209ENST00000529854 AFDNP55196 1824 aaKnown RBP22.17■■□□□ 1.14
GSDMD-209ENST00000529854 PXDNLA1KZ92 1463 aa22.17■■□□□ 1.14
GSDMD-209ENST00000529854 ANXA1P04083 346 aa22.17■■□□□ 1.14
GSDMD-209ENST00000529854 GNAI1P63096 354 aa22.17■■□□□ 1.14
GSDMD-209ENST00000529854 CCDC27Q2M243 656 aa22.17■■□□□ 1.14
GSDMD-209ENST00000529854 WWC1Q8IX03 1113 aa22.17■■□□□ 1.14
GSDMD-209ENST00000529854 KIAA1551Q9HCM1 1747 aa22.17■■□□□ 1.14
GSDMD-209ENST00000529854 SERPINB2P05120 415 aa22.16■■□□□ 1.14
GSDMD-209ENST00000529854 PROSER3Q2NL68 480 aa22.16■■□□□ 1.14
GSDMD-209ENST00000529854 N4BP2Q86UW6 1770 aaPredicted RBP22.15■■□□□ 1.14
GSDMD-209ENST00000529854 ERBB4Q15303 1308 aa22.15■■□□□ 1.14
GSDMD-209ENST00000529854 YBX3P16989 372 aaKnown RBP eCLIP22.15■■□□□ 1.14
GSDMD-209ENST00000529854 PDIA6Q15084 440 aa22.15■■□□□ 1.14
GSDMD-209ENST00000529854 TTLL7Q6ZT98 887 aa22.15■■□□□ 1.14
GSDMD-209ENST00000529854 NRXN2Q9P2S2 1712 aa22.14■■□□□ 1.14
GSDMD-209ENST00000529854 UTRNP46939 3433 aa22.14■■□□□ 1.13
GSDMD-209ENST00000529854 GOLGB1Q14789 3259 aaKnown RBP22.14■■□□□ 1.13
GSDMD-209ENST00000529854 A0A0G2JLW4 131 aa22.13■■□□□ 1.13
GSDMD-209ENST00000529854 HLFQ16534 295 aa22.13■■□□□ 1.13
GSDMD-209ENST00000529854 DUSP27Q5VZP5 1158 aa22.13■■□□□ 1.13
GSDMD-209ENST00000529854 LRP10Q7Z4F1 713 aa22.13■■□□□ 1.13
GSDMD-209ENST00000529854 TSR2Q969E8 191 aaKnown RBP22.13■■□□□ 1.13
GSDMD-209ENST00000529854 CARMIL3Q8ND23 1372 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms