RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 CNTNAP4Q9C0A0 1308 aa14.78□□□□□ -0.04
CHD7-209ENST00000529472 ELL2O00472 640 aaPredicted RBP14.78□□□□□ -0.04
CHD7-209ENST00000529472 SLFN5Q08AF3 891 aa14.78□□□□□ -0.04
CHD7-209ENST00000529472 NBPF14Q5TI25 921 aa14.78□□□□□ -0.04
CHD7-209ENST00000529472 C8orf58Q8NAV2 365 aa14.78□□□□□ -0.04
CHD7-209ENST00000529472 STK32BQ9NY57 414 aa14.78□□□□□ -0.04
CHD7-209ENST00000529472 USP16Q9Y5T5 823 aa14.78□□□□□ -0.04
CHD7-209ENST00000529472 GNPATO15228 680 aa14.77□□□□□ -0.05
CHD7-209ENST00000529472 DUSP27Q5VZP5 1158 aa14.77□□□□□ -0.05
CHD7-209ENST00000529472 NECTIN2Q92692 538 aa14.77□□□□□ -0.05
CHD7-209ENST00000529472 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
CHD7-209ENST00000529472 CCDC87Q9NVE4 849 aa14.77□□□□□ -0.05
CHD7-209ENST00000529472 TFCP2L1Q9NZI6 479 aa14.77□□□□□ -0.05
CHD7-209ENST00000529472 UBR3Q6ZT12 1888 aa14.77□□□□□ -0.05
CHD7-209ENST00000529472 EIF2S2P20042 333 aaKnown RBP14.76□□□□□ -0.05
CHD7-209ENST00000529472 HMGB2P26583 209 aaKnown RBP14.76□□□□□ -0.05
CHD7-209ENST00000529472 EXOSC9Q06265 439 aaKnown RBP14.76□□□□□ -0.05
CHD7-209ENST00000529472 SLC15A2Q16348 729 aa14.76□□□□□ -0.05
CHD7-209ENST00000529472 INTS5Q6P9B9 1019 aaKnown RBP14.76□□□□□ -0.05
CHD7-209ENST00000529472 SMIM5Q71RC9 77 aa14.76□□□□□ -0.05
CHD7-209ENST00000529472 TSPYL6Q8N831 410 aa14.76□□□□□ -0.05
CHD7-209ENST00000529472 ZBTB1Q9Y2K1 713 aa14.76□□□□□ -0.05
CHD7-209ENST00000529472 PHF14O94880 888 aa14.75□□□□□ -0.05
CHD7-209ENST00000529472 A1BGP04217 495 aa14.75□□□□□ -0.05
CHD7-209ENST00000529472 CANXP27824 592 aaKnown RBP14.75□□□□□ -0.05
CHD7-209ENST00000529472 PIP4K2AP48426 406 aaPredicted RBP14.75□□□□□ -0.05
CHD7-209ENST00000529472 R3HDM1Q15032 1099 aaKnown RBP14.75□□□□□ -0.05
CHD7-209ENST00000529472 RC3H1Q5TC82 1133 aaKnown RBP14.75□□□□□ -0.05
CHD7-209ENST00000529472 HDGFL1Q5TGJ6 251 aa14.75□□□□□ -0.05
CHD7-209ENST00000529472 AMIGO3Q86WK7 504 aa14.75□□□□□ -0.05
CHD7-209ENST00000529472 PSDA5PKW4 1024 aaPredicted RBP14.74□□□□□ -0.05
CHD7-209ENST00000529472 HOXB7P09629 217 aa14.74□□□□□ -0.05
CHD7-209ENST00000529472 TWISTNBQ3B726 338 aaPredicted RBP14.74□□□□□ -0.05
CHD7-209ENST00000529472 RTCBQ9Y3I0 505 aaKnown RBP14.74□□□□□ -0.05
CHD7-209ENST00000529472 ZNF330Q9Y3S2 320 aaPredicted RBP14.74□□□□□ -0.05
CHD7-209ENST00000529472 QSER1Q2KHR3 1735 aa14.74□□□□□ -0.05
CHD7-209ENST00000529472 TRMT2AQ8IZ69 625 aaKnown RBP14.73□□□□□ -0.05
CHD7-209ENST00000529472 SOS1Q07889 1333 aaPredicted RBP14.72□□□□□ -0.05
CHD7-209ENST00000529472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.72□□□□□ -0.05
CHD7-209ENST00000529472 MSH5O43196 834 aa14.72□□□□□ -0.05
CHD7-209ENST00000529472 MYL6BP14649 208 aa14.72□□□□□ -0.05
CHD7-209ENST00000529472 C4AP0C0L4 1744 aa14.72□□□□□ -0.05
CHD7-209ENST00000529472 PNPLA7Q6ZV29 1317 aa14.71□□□□□ -0.05
CHD7-209ENST00000529472 NBPF26B4DH59 902 aa14.71□□□□□ -0.05
CHD7-209ENST00000529472 RPS6KA4O75676 772 aa14.71□□□□□ -0.05
CHD7-209ENST00000529472 ANXA1P04083 346 aa14.71□□□□□ -0.05
CHD7-209ENST00000529472 SSFA2P28290 1259 aa14.71□□□□□ -0.05
CHD7-209ENST00000529472 NBPF10Q6P3W6 841 aaKnown RBP14.71□□□□□ -0.05
CHD7-209ENST00000529472 NBPF15Q8N660 670 aa14.71□□□□□ -0.05
CHD7-209ENST00000529472 CHPF2Q9P2E5 772 aa14.71□□□□□ -0.05
CHD7-209ENST00000529472 COL15A1P39059 1388 aa14.71□□□□□ -0.06
CHD7-209ENST00000529472 TCERG1O14776 1098 aaKnown RBP14.7□□□□□ -0.06
CHD7-209ENST00000529472 IL6STP40189 918 aaPredicted RBP14.7□□□□□ -0.06
CHD7-209ENST00000529472 PROSER3Q2NL68 480 aa14.7□□□□□ -0.06
CHD7-209ENST00000529472 NPM2Q86SE8 214 aaKnown RBP14.7□□□□□ -0.06
CHD7-209ENST00000529472 PDGFDQ9GZP0 370 aaPredicted RBP14.7□□□□□ -0.06
CHD7-209ENST00000529472 CASZ1Q86V15 1759 aa14.7□□□□□ -0.06
CHD7-209ENST00000529472 ERBB4Q15303 1308 aa14.69□□□□□ -0.06
CHD7-209ENST00000529472 VAMP4O75379 141 aa14.69□□□□□ -0.06
CHD7-209ENST00000529472 ADRA2BP18089 450 aa14.69□□□□□ -0.06
CHD7-209ENST00000529472 EIF5P55010 431 aaKnown RBP14.69□□□□□ -0.06
CHD7-209ENST00000529472 TRAPPC3LQ5T215 181 aa14.69□□□□□ -0.06
CHD7-209ENST00000529472 CCDC30Q5VVM6 783 aa14.69□□□□□ -0.06
CHD7-209ENST00000529472 COL23A1Q86Y22 540 aaPredicted RBP14.69□□□□□ -0.06
CHD7-209ENST00000529472 FLAD1Q8NFF5 587 aa14.69□□□□□ -0.06
CHD7-209ENST00000529472 ARHGEF1Q92888 912 aaKnown RBP14.69□□□□□ -0.06
CHD7-209ENST00000529472 ARXQ96QS3 562 aa14.69□□□□□ -0.06
CHD7-209ENST00000529472 RFC4P35249 363 aa14.68□□□□□ -0.06
CHD7-209ENST00000529472 PDIA6Q15084 440 aa14.68□□□□□ -0.06
CHD7-209ENST00000529472 STK31Q9BXU1 1019 aa14.68□□□□□ -0.06
CHD7-209ENST00000529472 DDX21Q9NR30 783 aaKnown RBP eCLIP14.68□□□□□ -0.06
CHD7-209ENST00000529472 DBF4Q9UBU7 674 aaPredicted RBP14.68□□□□□ -0.06
CHD7-209ENST00000529472 CHMP4AQ9BY43 222 aa14.67□□□□□ -0.06
CHD7-209ENST00000529472 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
CHD7-209ENST00000529472 SCN7AQ01118 1682 aa14.66□□□□□ -0.06
CHD7-209ENST00000529472 A0A087WZG4 1122 aa14.66□□□□□ -0.06
CHD7-209ENST00000529472 POTEDQ86YR6 584 aa14.66□□□□□ -0.06
CHD7-209ENST00000529472 TBC1D2BQ9UPU7 963 aa14.66□□□□□ -0.06
CHD7-209ENST00000529472 ZPR1O75312 459 aa14.65□□□□□ -0.06
CHD7-209ENST00000529472 ZBTB7AO95365 584 aa14.65□□□□□ -0.06
CHD7-209ENST00000529472 AIMP1Q12904 312 aaKnown RBP14.65□□□□□ -0.06
CHD7-209ENST00000529472 LRP10Q7Z4F1 713 aa14.65□□□□□ -0.06
CHD7-209ENST00000529472 DZIP3Q86Y13 1208 aaKnown RBP14.65□□□□□ -0.06
CHD7-209ENST00000529472 XAGE3Q8WTP9 111 aa14.65□□□□□ -0.06
CHD7-209ENST00000529472 HYPKQ9NX55 129 aa14.65□□□□□ -0.06
CHD7-209ENST00000529472 BCORQ6W2J9 1755 aa14.65□□□□□ -0.06
CHD7-209ENST00000529472 USP42Q9H9J4 1324 aaKnown RBP14.65□□□□□ -0.06
CHD7-209ENST00000529472 SLC4A2P04920 1241 aa14.64□□□□□ -0.07
CHD7-209ENST00000529472 USPL1Q5W0Q7 1092 aa14.64□□□□□ -0.07
CHD7-209ENST00000529472 MSL1Q68DK7 614 aa14.64□□□□□ -0.07
CHD7-209ENST00000529472 KIF6Q6ZMV9 814 aa14.64□□□□□ -0.07
CHD7-209ENST00000529472 TTLL7Q6ZT98 887 aa14.64□□□□□ -0.07
CHD7-209ENST00000529472 COPS6Q7L5N1 327 aa14.64□□□□□ -0.07
CHD7-209ENST00000529472 BCL2L13Q9BXK5 485 aa14.64□□□□□ -0.07
CHD7-209ENST00000529472 CACNA1FO60840 1977 aa14.64□□□□□ -0.07
CHD7-209ENST00000529472 CAMTA2O94983 1202 aa14.63□□□□□ -0.07
CHD7-209ENST00000529472 CT47B1P0C2W7 299 aaPredicted RBP14.63□□□□□ -0.07
CHD7-209ENST00000529472 PHAXQ9H814 394 aaKnown RBP14.63□□□□□ -0.07
CHD7-209ENST00000529472 NARFQ9UHQ1 456 aa14.63□□□□□ -0.07
CHD7-209ENST00000529472 G2E3Q7L622 706 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms