RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	CANX	P27824	592 aa	Known RBP	15.56	■□□□□ 0.08
PSMC3-205	ENST00000528362	GPR162	Q16538	588 aa		15.56	■□□□□ 0.08
PSMC3-205	ENST00000528362	THUMPD2	Q9BTF0	503 aa	Known RBP	15.56	■□□□□ 0.08
PSMC3-205	ENST00000528362	TEX13A	Q9BXU3	409 aa	Predicted RBP	15.56	■□□□□ 0.08
PSMC3-205	ENST00000528362	SIPA1L3	O60292	1781 aa	Predicted RBP	15.56	■□□□□ 0.08
PSMC3-205	ENST00000528362	PRAMEF22	A3QJZ6	481 aa		15.55	■□□□□ 0.08
PSMC3-205	ENST00000528362	EIF5	P55010	431 aa	Known RBP	15.55	■□□□□ 0.08
PSMC3-205	ENST00000528362	TAF7	Q15545	349 aa	Predicted RBP	15.55	■□□□□ 0.08
PSMC3-205	ENST00000528362	USPL1	Q5W0Q7	1092 aa		15.55	■□□□□ 0.08
PSMC3-205	ENST00000528362	PELP1	Q8IZL8	1130 aa	Known RBP	15.55	■□□□□ 0.08
PSMC3-205	ENST00000528362	C10orf71	Q711Q0	1435 aa		15.54	■□□□□ 0.08
PSMC3-205	ENST00000528362	ZNF316	A6NFI3	1004 aa	Predicted RBP	15.54	■□□□□ 0.08
PSMC3-205	ENST00000528362	ZPR1	O75312	459 aa		15.54	■□□□□ 0.08
PSMC3-205	ENST00000528362	A1BG	P04217	495 aa		15.54	■□□□□ 0.08
PSMC3-205	ENST00000528362	YBX3	P16989	372 aa	Known RBP eCLIP	15.54	■□□□□ 0.08	1e-12	■□□□□ 11
PSMC3-205	ENST00000528362	DDR1	Q08345	913 aa		15.54	■□□□□ 0.08
PSMC3-205	ENST00000528362	WDR43	Q15061	677 aa	Known RBP eCLIP	15.54	■□□□□ 0.08
PSMC3-205	ENST00000528362	MIS18A	Q9NYP9	233 aa		15.54	■□□□□ 0.08
PSMC3-205	ENST00000528362	NARF	Q9UHQ1	456 aa		15.54	■□□□□ 0.08
PSMC3-205	ENST00000528362	SNRPA1	P09661	255 aa	Known RBP	15.53	■□□□□ 0.08
PSMC3-205	ENST00000528362	CCDC146	Q8IYE0	955 aa		15.53	■□□□□ 0.08
PSMC3-205	ENST00000528362	BCL2L12	Q9HB09	334 aa		15.53	■□□□□ 0.08
PSMC3-205	ENST00000528362	USP16	Q9Y5T5	823 aa		15.53	■□□□□ 0.08
PSMC3-205	ENST00000528362	C4A	P0C0L4	1744 aa		15.53	■□□□□ 0.08
PSMC3-205	ENST00000528362	TM4SF1	P30408	202 aa		15.52	■□□□□ 0.08
PSMC3-205	ENST00000528362	TMPO	P42166	694 aa	Known RBP	15.52	■□□□□ 0.08
PSMC3-205	ENST00000528362	RIPK4	P57078	832 aa		15.52	■□□□□ 0.08
PSMC3-205	ENST00000528362	ADAMTS8	Q9UP79	889 aa		15.52	■□□□□ 0.08
PSMC3-205	ENST00000528362	PARP3	Q9Y6F1	533 aa		15.52	■□□□□ 0.08
PSMC3-205	ENST00000528362	VIRMA	Q69YN4	1812 aa	Known RBP	15.52	■□□□□ 0.07
PSMC3-205	ENST00000528362	POLRMT	O00411	1230 aa	Known RBP	15.51	■□□□□ 0.07
PSMC3-205	ENST00000528362	IL6ST	P40189	918 aa	Predicted RBP	15.51	■□□□□ 0.07
PSMC3-205	ENST00000528362	PNISR	Q8TF01	805 aa	Known RBP	15.51	■□□□□ 0.07
PSMC3-205	ENST00000528362	RRP7A	Q9Y3A4	280 aa	Known RBP	15.51	■□□□□ 0.07
PSMC3-205	ENST00000528362	PXDNL	A1KZ92	1463 aa		15.51	■□□□□ 0.07
PSMC3-205	ENST00000528362		A0A087WZG4	1122 aa		15.5	■□□□□ 0.07
PSMC3-205	ENST00000528362	PIP4K2A	P48426	406 aa	Predicted RBP	15.5	■□□□□ 0.07
PSMC3-205	ENST00000528362	NFIX	Q14938	502 aa		15.5	■□□□□ 0.07
PSMC3-205	ENST00000528362	RUNDC1	Q96C34	613 aa		15.5	■□□□□ 0.07
PSMC3-205	ENST00000528362	WWC3	Q9ULE0	1092 aa		15.5	■□□□□ 0.07
PSMC3-205	ENST00000528362	ZNF330	Q9Y3S2	320 aa	Predicted RBP	15.5	■□□□□ 0.07
PSMC3-205	ENST00000528362	EIF4A1	P60842	406 aa	Known RBP	15.49	■□□□□ 0.07
PSMC3-205	ENST00000528362	TGFB2	P61812	414 aa		15.48	■□□□□ 0.07
PSMC3-205	ENST00000528362	LMOD3	Q0VAK6	560 aa		15.48	■□□□□ 0.07
PSMC3-205	ENST00000528362	TBC1D2B	Q9UPU7	963 aa		15.48	■□□□□ 0.07
PSMC3-205	ENST00000528362		A0A0G2JLW4	131 aa		15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	NBPF26	B4DH59	902 aa		15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	GRIN3B	O60391	1043 aa		15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	GIGYF1	O75420	1035 aa	Predicted RBP	15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	CAMTA2	O94983	1202 aa		15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	NEUROD2	Q15784	382 aa		15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	CCDC184	Q52MB2	194 aa		15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	NBPF10	Q6P3W6	841 aa	Known RBP	15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	NBPF15	Q8N660	670 aa		15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	ZNF784	Q8NCA9	323 aa	Predicted RBP	15.47	■□□□□ 0.07
PSMC3-205	ENST00000528362	DPEP1	P16444	411 aa		15.46	■□□□□ 0.07
PSMC3-205	ENST00000528362	TSPYL4	Q9UJ04	414 aa		15.46	■□□□□ 0.07
PSMC3-205	ENST00000528362	TRIM35	Q9UPQ4	493 aa		15.46	■□□□□ 0.07
PSMC3-205	ENST00000528362	TBC1D9B	Q66K14	1250 aa		15.45	■□□□□ 0.06
PSMC3-205	ENST00000528362	NPM2	Q86SE8	214 aa	Known RBP	15.45	■□□□□ 0.06
PSMC3-205	ENST00000528362	DZIP3	Q86Y13	1208 aa	Known RBP	15.45	■□□□□ 0.06
PSMC3-205	ENST00000528362	SERPINB2	P05120	415 aa		15.44	■□□□□ 0.06
PSMC3-205	ENST00000528362	KCNA3	P22001	575 aa		15.44	■□□□□ 0.06
PSMC3-205	ENST00000528362	BICDL1	Q6ZP65	573 aa		15.44	■□□□□ 0.06
PSMC3-205	ENST00000528362	BABAM1	Q9NWV8	329 aa		15.44	■□□□□ 0.06
PSMC3-205	ENST00000528362	DLG5	Q8TDM6	1919 aa		15.43	■□□□□ 0.06
PSMC3-205	ENST00000528362	KDM3B	Q7LBC6	1761 aa		15.42	■□□□□ 0.06
PSMC3-205	ENST00000528362	CARMIL3	Q8ND23	1372 aa		15.42	■□□□□ 0.06
PSMC3-205	ENST00000528362	CHRNA5	P30532	468 aa		15.42	■□□□□ 0.06
PSMC3-205	ENST00000528362	KIF13B	Q9NQT8	1826 aa		15.42	■□□□□ 0.06
PSMC3-205	ENST00000528362	KIAA1551	Q9HCM1	1747 aa		15.42	■□□□□ 0.06
PSMC3-205	ENST00000528362	SCN7A	Q01118	1682 aa		15.41	■□□□□ 0.06
PSMC3-205	ENST00000528362	CHL1	O00533	1208 aa		15.41	■□□□□ 0.06
PSMC3-205	ENST00000528362	APAF1	O14727	1248 aa		15.41	■□□□□ 0.06
PSMC3-205	ENST00000528362	ANP32C	O43423	234 aa		15.41	■□□□□ 0.06
PSMC3-205	ENST00000528362	BCS1L	Q9Y276	419 aa		15.41	■□□□□ 0.06
PSMC3-205	ENST00000528362	PRR5L	Q6MZQ0	368 aa		15.39	■□□□□ 0.05
PSMC3-205	ENST00000528362	CLEC4G	Q6UXB4	293 aa		15.39	■□□□□ 0.05
PSMC3-205	ENST00000528362	SETDB2	Q96T68	719 aa		15.39	■□□□□ 0.05
PSMC3-205	ENST00000528362	PIM2	Q9P1W9	311 aa		15.39	■□□□□ 0.05
PSMC3-205	ENST00000528362	CHD4	Q14839	1912 aa		15.39	■□□□□ 0.05
PSMC3-205	ENST00000528362	NRXN2	Q9P2S2	1712 aa		15.38	■□□□□ 0.05
PSMC3-205	ENST00000528362	RGL2	O15211	777 aa		15.38	■□□□□ 0.05
PSMC3-205	ENST00000528362	KRT24	Q2M2I5	525 aa		15.38	■□□□□ 0.05
PSMC3-205	ENST00000528362	LRP10	Q7Z4F1	713 aa		15.38	■□□□□ 0.05
PSMC3-205	ENST00000528362	NGEF	Q8N5V2	710 aa		15.38	■□□□□ 0.05
PSMC3-205	ENST00000528362	MRS2	Q9HD23	443 aa		15.38	■□□□□ 0.05
PSMC3-205	ENST00000528362	ZNF652	Q9Y2D9	606 aa		15.38	■□□□□ 0.05
PSMC3-205	ENST00000528362	LAS1L	Q9Y4W2	734 aa	Known RBP	15.38	■□□□□ 0.05
PSMC3-205	ENST00000528362	ERBB4	Q15303	1308 aa		15.38	■□□□□ 0.05
PSMC3-205	ENST00000528362	MYL6B	P14649	208 aa		15.37	■□□□□ 0.05
PSMC3-205	ENST00000528362	PDIA6	Q15084	440 aa		15.37	■□□□□ 0.05
PSMC3-205	ENST00000528362	HLF	Q16534	295 aa		15.37	■□□□□ 0.05
PSMC3-205	ENST00000528362	TTLL7	Q6ZT98	887 aa		15.37	■□□□□ 0.05
PSMC3-205	ENST00000528362	CCDC24	Q8N4L8	307 aa		15.37	■□□□□ 0.05
PSMC3-205	ENST00000528362	CNBD1	Q8NA66	436 aa		15.37	■□□□□ 0.05
PSMC3-205	ENST00000528362	EIF2S2	P20042	333 aa	Known RBP	15.36	■□□□□ 0.05
PSMC3-205	ENST00000528362	PROSER3	Q2NL68	480 aa		15.36	■□□□□ 0.05
PSMC3-205	ENST00000528362	DALRD3	Q5D0E6	543 aa	Known RBP	15.36	■□□□□ 0.05
PSMC3-205	ENST00000528362	CFAP44	Q96MT7	982 aa		15.36	■□□□□ 0.05

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms