RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 MMP10P09238 476 aa16■□□□□ 0.15
TRAPPC4-209ENST00000528230 PNISRQ8TF01 805 aaKnown RBP16■□□□□ 0.15
TRAPPC4-209ENST00000528230 ZBTB1Q9Y2K1 713 aa16■□□□□ 0.15
TRAPPC4-209ENST00000528230 ZPR1O75312 459 aa15.99■□□□□ 0.15
TRAPPC4-209ENST00000528230 WDR43Q15061 677 aaKnown RBP eCLIP15.99■□□□□ 0.15
TRAPPC4-209ENST00000528230 NLGN2Q8NFZ4 835 aa15.99■□□□□ 0.15
TRAPPC4-209ENST00000528230 NARFQ9UHQ1 456 aa15.99■□□□□ 0.15
TRAPPC4-209ENST00000528230 A0A087WZG4 1122 aa15.98■□□□□ 0.15
TRAPPC4-209ENST00000528230 SNRPA1P09661 255 aaKnown RBP15.98■□□□□ 0.15
TRAPPC4-209ENST00000528230 EIF5P55010 431 aaKnown RBP15.98■□□□□ 0.15
TRAPPC4-209ENST00000528230 KIF13BQ9NQT8 1826 aa15.98■□□□□ 0.15
TRAPPC4-209ENST00000528230 COL15A1P39059 1388 aa15.98■□□□□ 0.15
TRAPPC4-209ENST00000528230 CHD4Q14839 1912 aa15.98■□□□□ 0.15
TRAPPC4-209ENST00000528230 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
TRAPPC4-209ENST00000528230 TMPOP42166 694 aaKnown RBP15.97■□□□□ 0.15
TRAPPC4-209ENST00000528230 RIPK4P57078 832 aa15.97■□□□□ 0.15
TRAPPC4-209ENST00000528230 GPR162Q16538 588 aa15.97■□□□□ 0.15
TRAPPC4-209ENST00000528230 RUNDC1Q96C34 613 aa15.97■□□□□ 0.15
TRAPPC4-209ENST00000528230 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
TRAPPC4-209ENST00000528230 PARP3Q9Y6F1 533 aa15.97■□□□□ 0.15
TRAPPC4-209ENST00000528230 KDM3BQ7LBC6 1761 aa15.96■□□□□ 0.15
TRAPPC4-209ENST00000528230 IL6STP40189 918 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC4-209ENST00000528230 LMOD3Q0VAK6 560 aa15.96■□□□□ 0.15
TRAPPC4-209ENST00000528230 FKBP8Q14318 412 aa15.96■□□□□ 0.15
TRAPPC4-209ENST00000528230 ADAMTS8Q9UP79 889 aa15.96■□□□□ 0.15
TRAPPC4-209ENST00000528230 USP16Q9Y5T5 823 aa15.96■□□□□ 0.15
TRAPPC4-209ENST00000528230 TM4SF1P30408 202 aa15.95■□□□□ 0.14
TRAPPC4-209ENST00000528230 USPL1Q5W0Q7 1092 aa15.95■□□□□ 0.14
TRAPPC4-209ENST00000528230 BABAM1Q9NWV8 329 aa15.95■□□□□ 0.14
TRAPPC4-209ENST00000528230 A1BGP04217 495 aa15.94■□□□□ 0.14
TRAPPC4-209ENST00000528230 TGFB2P61812 414 aa15.94■□□□□ 0.14
TRAPPC4-209ENST00000528230 MIS18AQ9NYP9 233 aa15.94■□□□□ 0.14
TRAPPC4-209ENST00000528230 GRIN3BO60391 1043 aa15.93■□□□□ 0.14
TRAPPC4-209ENST00000528230 YY1P25490 414 aa15.93■□□□□ 0.14
TRAPPC4-209ENST00000528230 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
TRAPPC4-209ENST00000528230 CCDC146Q8IYE0 955 aa15.93■□□□□ 0.14
TRAPPC4-209ENST00000528230 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
TRAPPC4-209ENST00000528230 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
TRAPPC4-209ENST00000528230 BCL2L12Q9HB09 334 aa15.92■□□□□ 0.14
TRAPPC4-209ENST00000528230 C10orf71Q711Q0 1435 aa15.92■□□□□ 0.14
TRAPPC4-209ENST00000528230 LAMB4A4D0S4 1761 aa15.91■□□□□ 0.14
TRAPPC4-209ENST00000528230 PRAMEF22A3QJZ6 481 aa15.91■□□□□ 0.14
TRAPPC4-209ENST00000528230 POLRMTO00411 1230 aaKnown RBP15.91■□□□□ 0.14
TRAPPC4-209ENST00000528230 GIGYF1O75420 1035 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC4-209ENST00000528230 DDR1Q08345 913 aa15.91■□□□□ 0.14
TRAPPC4-209ENST00000528230 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
TRAPPC4-209ENST00000528230 AFDNP55196 1824 aaKnown RBP15.9■□□□□ 0.14
TRAPPC4-209ENST00000528230 YBX3P16989 372 aaKnown RBP eCLIP15.9■□□□□ 0.14
TRAPPC4-209ENST00000528230 NFIXQ14938 502 aa15.9■□□□□ 0.14
TRAPPC4-209ENST00000528230 KIAA1551Q9HCM1 1747 aa15.9■□□□□ 0.14
TRAPPC4-209ENST00000528230 NRXN2Q9P2S2 1712 aa15.89■□□□□ 0.13
TRAPPC4-209ENST00000528230 ANP32CO43423 234 aa15.89■□□□□ 0.13
TRAPPC4-209ENST00000528230 NEUROD2Q15784 382 aa15.89■□□□□ 0.13
TRAPPC4-209ENST00000528230 TSPYL4Q9UJ04 414 aa15.89■□□□□ 0.13
TRAPPC4-209ENST00000528230 TRIM35Q9UPQ4 493 aa15.89■□□□□ 0.13
TRAPPC4-209ENST00000528230 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.13
TRAPPC4-209ENST00000528230 RRP7AQ9Y3A4 280 aaKnown RBP15.89■□□□□ 0.13
TRAPPC4-209ENST00000528230 N4BP2Q86UW6 1770 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC4-209ENST00000528230 SCN7AQ01118 1682 aa15.89■□□□□ 0.13
TRAPPC4-209ENST00000528230 RGL2O15211 777 aa15.88■□□□□ 0.13
TRAPPC4-209ENST00000528230 ZNF330Q9Y3S2 320 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC4-209ENST00000528230 PXDNLA1KZ92 1463 aa15.88■□□□□ 0.13
TRAPPC4-209ENST00000528230 NBPF26B4DH59 902 aa15.87■□□□□ 0.13
TRAPPC4-209ENST00000528230 CAMTA2O94983 1202 aa15.87■□□□□ 0.13
TRAPPC4-209ENST00000528230 SERPINB2P05120 415 aa15.87■□□□□ 0.13
TRAPPC4-209ENST00000528230 NBPF10Q6P3W6 841 aaKnown RBP15.87■□□□□ 0.13
TRAPPC4-209ENST00000528230 CLEC4GQ6UXB4 293 aa15.87■□□□□ 0.13
TRAPPC4-209ENST00000528230 DZIP3Q86Y13 1208 aaKnown RBP15.87■□□□□ 0.13
TRAPPC4-209ENST00000528230 NBPF15Q8N660 670 aa15.87■□□□□ 0.13
TRAPPC4-209ENST00000528230 BCORQ6W2J9 1755 aa15.87■□□□□ 0.13
TRAPPC4-209ENST00000528230 BRCA1P38398 1863 aaKnown RBP15.86■□□□□ 0.13
TRAPPC4-209ENST00000528230 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
TRAPPC4-209ENST00000528230 CHL1O00533 1208 aa15.86■□□□□ 0.13
TRAPPC4-209ENST00000528230 DPEP1P16444 411 aa15.85■□□□□ 0.13
TRAPPC4-209ENST00000528230 PIP4K2AP48426 406 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC4-209ENST00000528230 CCDC184Q52MB2 194 aa15.85■□□□□ 0.13
TRAPPC4-209ENST00000528230 TBC1D9BQ66K14 1250 aa15.85■□□□□ 0.13
TRAPPC4-209ENST00000528230 ERBB4Q15303 1308 aa15.85■□□□□ 0.13
TRAPPC4-209ENST00000528230 APAF1O14727 1248 aa15.84■□□□□ 0.13
TRAPPC4-209ENST00000528230 KCNA3P22001 575 aa15.84■□□□□ 0.13
TRAPPC4-209ENST00000528230 ZNF652Q9Y2D9 606 aa15.84■□□□□ 0.13
TRAPPC4-209ENST00000528230 BICDL1Q6ZP65 573 aa15.83■□□□□ 0.12
TRAPPC4-209ENST00000528230 SETDB2Q96T68 719 aa15.83■□□□□ 0.12
TRAPPC4-209ENST00000528230 PIM2Q9P1W9 311 aa15.83■□□□□ 0.12
TRAPPC4-209ENST00000528230 CARMIL3Q8ND23 1372 aa15.83■□□□□ 0.12
TRAPPC4-209ENST00000528230 ARFGEF1Q9Y6D6 1849 aa15.82■□□□□ 0.12
TRAPPC4-209ENST00000528230 CALD1Q05682 793 aaKnown RBP15.82■□□□□ 0.12
TRAPPC4-209ENST00000528230 CFAP44Q96MT7 982 aa15.82■□□□□ 0.12
TRAPPC4-209ENST00000528230 PDZRN3Q9UPQ7 1066 aa15.82■□□□□ 0.12
TRAPPC4-209ENST00000528230 ERVV-1B6SEH8 477 aa15.81■□□□□ 0.12
TRAPPC4-209ENST00000528230 MRS2Q9HD23 443 aa15.81■□□□□ 0.12
TRAPPC4-209ENST00000528230 NUP98P52948 1817 aa15.8■□□□□ 0.12
TRAPPC4-209ENST00000528230 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
TRAPPC4-209ENST00000528230 WWC3Q9ULE0 1092 aa15.8■□□□□ 0.12
TRAPPC4-209ENST00000528230 BCS1LQ9Y276 419 aa15.8■□□□□ 0.12
TRAPPC4-209ENST00000528230 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
TRAPPC4-209ENST00000528230 DLEC1Q9Y238 1755 aa15.8■□□□□ 0.12
TRAPPC4-209ENST00000528230 HOXB7P09629 217 aa15.79■□□□□ 0.12
TRAPPC4-209ENST00000528230 ZNF853P0CG23 659 aa15.79■□□□□ 0.12
TRAPPC4-209ENST00000528230 CHRNA5P30532 468 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms