RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
CNKSR1-211ENST00000528001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.07■□□□□ 0.32
CNKSR1-211ENST00000528001 GNAI1P63096 354 aa17.07■□□□□ 0.32
CNKSR1-211ENST00000528001 COL23A1Q86Y22 540 aaPredicted RBP17.07■□□□□ 0.32
CNKSR1-211ENST00000528001 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
CNKSR1-211ENST00000528001 SPON1Q9HCB6 807 aa17.07■□□□□ 0.32
CNKSR1-211ENST00000528001 GIGYF1O75420 1035 aaPredicted RBP17.06■□□□□ 0.32
CNKSR1-211ENST00000528001 TRAPPC3LQ5T215 181 aa17.06■□□□□ 0.32
CNKSR1-211ENST00000528001 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
CNKSR1-211ENST00000528001 MYH14Q7Z406 1995 aaKnown RBP17.06■□□□□ 0.32
CNKSR1-211ENST00000528001 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
CNKSR1-211ENST00000528001 SOS1Q07889 1333 aaPredicted RBP17.05■□□□□ 0.32
CNKSR1-211ENST00000528001 HOXB7P09629 217 aa17.05■□□□□ 0.32
CNKSR1-211ENST00000528001 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
CNKSR1-211ENST00000528001 MIER1Q8N108 512 aa17.05■□□□□ 0.32
CNKSR1-211ENST00000528001 PDGFDQ9GZP0 370 aaPredicted RBP17.05■□□□□ 0.32
CNKSR1-211ENST00000528001 ERBB4Q15303 1308 aa17.04■□□□□ 0.32
CNKSR1-211ENST00000528001 IL6STP40189 918 aaPredicted RBP17.04■□□□□ 0.32
CNKSR1-211ENST00000528001 AMIGO3Q86WK7 504 aa17.04■□□□□ 0.32
CNKSR1-211ENST00000528001 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
CNKSR1-211ENST00000528001 A0A087WZG4 1122 aa17.03■□□□□ 0.32
CNKSR1-211ENST00000528001 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
CNKSR1-211ENST00000528001 ZBTB1Q9Y2K1 713 aa17.03■□□□□ 0.32
CNKSR1-211ENST00000528001 RGL2O15211 777 aa17.02■□□□□ 0.32
CNKSR1-211ENST00000528001 ARHGEF1Q92888 912 aaKnown RBP17.02■□□□□ 0.32
CNKSR1-211ENST00000528001 CHMP4AQ9BY43 222 aa17.02■□□□□ 0.32
CNKSR1-211ENST00000528001 USP16Q9Y5T5 823 aa17.02■□□□□ 0.32
CNKSR1-211ENST00000528001 COL15A1P39059 1388 aa17.02■□□□□ 0.31
CNKSR1-211ENST00000528001 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
CNKSR1-211ENST00000528001 PHF14O94880 888 aa17.01■□□□□ 0.31
CNKSR1-211ENST00000528001 ZBTB7AO95365 584 aa17.01■□□□□ 0.31
CNKSR1-211ENST00000528001 RFC4P35249 363 aa17.01■□□□□ 0.31
CNKSR1-211ENST00000528001 PTGER2P43116 358 aa17.01■□□□□ 0.31
CNKSR1-211ENST00000528001 MBIPQ9NS73 344 aa17.01■□□□□ 0.31
CNKSR1-211ENST00000528001 USP42Q9H9J4 1324 aaKnown RBP17■□□□□ 0.31
CNKSR1-211ENST00000528001 C4AP0C0L4 1744 aa17■□□□□ 0.31
CNKSR1-211ENST00000528001 NLGN1Q8N2Q7 840 aa17■□□□□ 0.31
CNKSR1-211ENST00000528001 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
CNKSR1-211ENST00000528001 MSH5O43196 834 aa16.99■□□□□ 0.31
CNKSR1-211ENST00000528001 POLD1P28340 1107 aa16.99■□□□□ 0.31
CNKSR1-211ENST00000528001 NARFQ9UHQ1 456 aa16.99■□□□□ 0.31
CNKSR1-211ENST00000528001 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
CNKSR1-211ENST00000528001 A1BGP04217 495 aa16.98■□□□□ 0.31
CNKSR1-211ENST00000528001 GYS1P13807 737 aa16.97■□□□□ 0.31
CNKSR1-211ENST00000528001 CANXP27824 592 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-211ENST00000528001 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
CNKSR1-211ENST00000528001 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
CNKSR1-211ENST00000528001 NBPF26B4DH59 902 aa16.96■□□□□ 0.31
CNKSR1-211ENST00000528001 ZPR1O75312 459 aa16.96■□□□□ 0.31
CNKSR1-211ENST00000528001 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
CNKSR1-211ENST00000528001 NBPF15Q8N660 670 aa16.96■□□□□ 0.31
CNKSR1-211ENST00000528001 SMIM5Q71RC9 77 aa16.95■□□□□ 0.3
CNKSR1-211ENST00000528001 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
CNKSR1-211ENST00000528001 SCN7AQ01118 1682 aa16.94■□□□□ 0.3
CNKSR1-211ENST00000528001 CLEC4GQ6UXB4 293 aa16.94■□□□□ 0.3
CNKSR1-211ENST00000528001 ARXQ96QS3 562 aa16.94■□□□□ 0.3
CNKSR1-211ENST00000528001 DUSP27Q5VZP5 1158 aa16.93■□□□□ 0.3
CNKSR1-211ENST00000528001 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
CNKSR1-211ENST00000528001 ERVV-1B6SEH8 477 aa16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 PDIA6Q15084 440 aa16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 HDGFL1Q5TGJ6 251 aa16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 USPL1Q5W0Q7 1092 aa16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 LRP10Q7Z4F1 713 aa16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 DDX21Q9NR30 783 aaKnown RBP eCLIP16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 PPP1R1BQ9UD71 204 aaPredicted RBP16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
CNKSR1-211ENST00000528001 E9PSI1 815 aa16.91■□□□□ 0.3
CNKSR1-211ENST00000528001 TM4SF1P30408 202 aa16.91■□□□□ 0.3
CNKSR1-211ENST00000528001 KRT24Q2M2I5 525 aa16.91■□□□□ 0.3
CNKSR1-211ENST00000528001 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
CNKSR1-211ENST00000528001 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
CNKSR1-211ENST00000528001 EIF2S2P20042 333 aaKnown RBP16.9■□□□□ 0.3
CNKSR1-211ENST00000528001 FKBP8Q14318 412 aa16.9■□□□□ 0.3
CNKSR1-211ENST00000528001 MSL1Q68DK7 614 aa16.9■□□□□ 0.3
CNKSR1-211ENST00000528001 C8orf58Q8NAV2 365 aa16.9■□□□□ 0.3
CNKSR1-211ENST00000528001 TSR2Q969E8 191 aaKnown RBP16.9■□□□□ 0.3
CNKSR1-211ENST00000528001 BCL2L12Q9HB09 334 aa16.9■□□□□ 0.3
CNKSR1-211ENST00000528001 ZNF652Q9Y2D9 606 aa16.9■□□□□ 0.3
CNKSR1-211ENST00000528001 SALL2Q9Y467 1007 aaPredicted RBP16.9■□□□□ 0.3
CNKSR1-211ENST00000528001 MMP10P09238 476 aa16.89■□□□□ 0.29
CNKSR1-211ENST00000528001 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
CNKSR1-211ENST00000528001 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
CNKSR1-211ENST00000528001 TBC1D2BQ9UPU7 963 aa16.89■□□□□ 0.29
CNKSR1-211ENST00000528001 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
CNKSR1-211ENST00000528001 TWISTNBQ3B726 338 aaPredicted RBP16.88■□□□□ 0.29
CNKSR1-211ENST00000528001 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
CNKSR1-211ENST00000528001 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
CNKSR1-211ENST00000528001 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
CNKSR1-211ENST00000528001 MAP3K15Q6ZN16 1313 aa16.88■□□□□ 0.29
CNKSR1-211ENST00000528001 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
CNKSR1-211ENST00000528001 SLFN5Q08AF3 891 aa16.87■□□□□ 0.29
CNKSR1-211ENST00000528001 KIF6Q6ZMV9 814 aa16.87■□□□□ 0.29
CNKSR1-211ENST00000528001 TRMT2AQ8IZ69 625 aaKnown RBP16.87■□□□□ 0.29
CNKSR1-211ENST00000528001 ATP10DQ9P241 1426 aa16.87■□□□□ 0.29
CNKSR1-211ENST00000528001 SENP3-EIF4A1A0A087X0R7 540 aa16.86■□□□□ 0.29
CNKSR1-211ENST00000528001 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
CNKSR1-211ENST00000528001 MYL6BP14649 208 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms