RNA–Protein interactions for RNA: ENST00000527868.1

IFT46-204, Transcript of intraflagellar transport 46, humanhuman

TSL 3

Gene IFT46, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-204ENST00000527868 RC3H1Q5TC82 1133 aaKnown RBP11.85□□□□□ -0.51
IFT46-204ENST00000527868 AK7Q96M32 723 aa11.85□□□□□ -0.51
IFT46-204ENST00000527868 TFCP2L1Q9NZI6 479 aa11.85□□□□□ -0.51
IFT46-204ENST00000527868 RRP7AQ9Y3A4 280 aaKnown RBP11.85□□□□□ -0.51
IFT46-204ENST00000527868 APAF1O14727 1248 aa11.84□□□□□ -0.51
IFT46-204ENST00000527868 DIEXFQ68CQ4 756 aaKnown RBP11.84□□□□□ -0.51
IFT46-204ENST00000527868 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
IFT46-204ENST00000527868 THUMPD2Q9BTF0 503 aaKnown RBP11.84□□□□□ -0.51
IFT46-204ENST00000527868 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
IFT46-204ENST00000527868 MYH14Q7Z406 1995 aaKnown RBP11.84□□□□□ -0.51
IFT46-204ENST00000527868 CCER2I3L3R5 266 aa11.83□□□□□ -0.52
IFT46-204ENST00000527868 SSFA2P28290 1259 aa11.83□□□□□ -0.52
IFT46-204ENST00000527868 NEUROD2Q15784 382 aa11.83□□□□□ -0.52
IFT46-204ENST00000527868 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
IFT46-204ENST00000527868 FLAD1Q8NFF5 587 aa11.83□□□□□ -0.52
IFT46-204ENST00000527868 FMNL2Q96PY5 1086 aa11.83□□□□□ -0.52
IFT46-204ENST00000527868 PDGFDQ9GZP0 370 aaPredicted RBP11.83□□□□□ -0.52
IFT46-204ENST00000527868 BABAM1Q9NWV8 329 aa11.83□□□□□ -0.52
IFT46-204ENST00000527868 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.52
IFT46-204ENST00000527868 GNPATO15228 680 aa11.82□□□□□ -0.52
IFT46-204ENST00000527868 KCNQ3O43525 872 aa11.82□□□□□ -0.52
IFT46-204ENST00000527868 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
IFT46-204ENST00000527868 AMIGO3Q86WK7 504 aa11.82□□□□□ -0.52
IFT46-204ENST00000527868 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
IFT46-204ENST00000527868 SLC16A10Q8TF71 515 aa11.82□□□□□ -0.52
IFT46-204ENST00000527868 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
IFT46-204ENST00000527868 COL23A1Q86Y22 540 aaPredicted RBP11.81□□□□□ -0.52
IFT46-204ENST00000527868 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
IFT46-204ENST00000527868 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
IFT46-204ENST00000527868 LAMB4A4D0S4 1761 aa11.8□□□□□ -0.52
IFT46-204ENST00000527868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
IFT46-204ENST00000527868 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
IFT46-204ENST00000527868 CCDC27Q2M243 656 aa11.8□□□□□ -0.52
IFT46-204ENST00000527868 INTS5Q6P9B9 1019 aaKnown RBP11.8□□□□□ -0.52
IFT46-204ENST00000527868 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
IFT46-204ENST00000527868 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
IFT46-204ENST00000527868 SPON1Q9HCB6 807 aa11.8□□□□□ -0.52
IFT46-204ENST00000527868 CCDC87Q9NVE4 849 aa11.8□□□□□ -0.52
IFT46-204ENST00000527868 MIS18AQ9NYP9 233 aa11.8□□□□□ -0.52
IFT46-204ENST00000527868 RTCBQ9Y3I0 505 aaKnown RBP11.8□□□□□ -0.52
IFT46-204ENST00000527868 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
IFT46-204ENST00000527868 PHF14O94880 888 aa11.79□□□□□ -0.52
IFT46-204ENST00000527868 ZBTB7AO95365 584 aa11.79□□□□□ -0.52
IFT46-204ENST00000527868 STARD3NLO95772 234 aa11.79□□□□□ -0.52
IFT46-204ENST00000527868 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
IFT46-204ENST00000527868 EIF4A1P60842 406 aaKnown RBP11.79□□□□□ -0.52
IFT46-204ENST00000527868 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
IFT46-204ENST00000527868 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
IFT46-204ENST00000527868 CHL1O00533 1208 aa11.78□□□□□ -0.52
IFT46-204ENST00000527868 CALD1Q05682 793 aaKnown RBP11.78□□□□□ -0.52
IFT46-204ENST00000527868 MIER1Q8N108 512 aa11.78□□□□□ -0.52
IFT46-204ENST00000527868 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
IFT46-204ENST00000527868 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
IFT46-204ENST00000527868 ZBTB1Q9Y2K1 713 aa11.78□□□□□ -0.52
IFT46-204ENST00000527868 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
IFT46-204ENST00000527868 GIGYF1O75420 1035 aaPredicted RBP11.77□□□□□ -0.53
IFT46-204ENST00000527868 ZNF853P0CG23 659 aa11.77□□□□□ -0.53
IFT46-204ENST00000527868 PTGER2P43116 358 aa11.77□□□□□ -0.53
IFT46-204ENST00000527868 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
IFT46-204ENST00000527868 SMIM5Q71RC9 77 aa11.77□□□□□ -0.53
IFT46-204ENST00000527868 NGEFQ8N5V2 710 aa11.77□□□□□ -0.53
IFT46-204ENST00000527868 IFT57Q9NWB7 429 aa11.77□□□□□ -0.53
IFT46-204ENST00000527868 PRAMEF22A3QJZ6 481 aa11.76□□□□□ -0.53
IFT46-204ENST00000527868 WWC1Q8IX03 1113 aa11.76□□□□□ -0.53
IFT46-204ENST00000527868 ARHGEF1Q92888 912 aaKnown RBP11.76□□□□□ -0.53
IFT46-204ENST00000527868 USP16Q9Y5T5 823 aa11.76□□□□□ -0.53
IFT46-204ENST00000527868 COL15A1P39059 1388 aa11.76□□□□□ -0.53
IFT46-204ENST00000527868 IL6STP40189 918 aaPredicted RBP11.75□□□□□ -0.53
IFT46-204ENST00000527868 EIF5P55010 431 aaKnown RBP11.75□□□□□ -0.53
IFT46-204ENST00000527868 GNAI1P63096 354 aa11.75□□□□□ -0.53
IFT46-204ENST00000527868 A1BGP04217 495 aa11.74□□□□□ -0.53
IFT46-204ENST00000527868 RFC4P35249 363 aa11.74□□□□□ -0.53
IFT46-204ENST00000527868 MBIPQ9NS73 344 aa11.74□□□□□ -0.53
IFT46-204ENST00000527868 LAS1LQ9Y4W2 734 aaKnown RBP11.74□□□□□ -0.53
IFT46-204ENST00000527868 IL16Q14005 1332 aa11.74□□□□□ -0.53
IFT46-204ENST00000527868 USP42Q9H9J4 1324 aaKnown RBP11.74□□□□□ -0.53
IFT46-204ENST00000527868 SCN7AQ01118 1682 aa11.74□□□□□ -0.53
IFT46-204ENST00000527868 GYS1P13807 737 aa11.73□□□□□ -0.53
IFT46-204ENST00000527868 CANXP27824 592 aaKnown RBP11.73□□□□□ -0.53
IFT46-204ENST00000527868 POLD1P28340 1107 aa11.73□□□□□ -0.53
IFT46-204ENST00000527868 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
IFT46-204ENST00000527868 BCORQ6W2J9 1755 aa11.72□□□□□ -0.53
IFT46-204ENST00000527868 A0A087WZG4 1122 aa11.72□□□□□ -0.53
IFT46-204ENST00000527868 SENP3-EIF4A1A0A087X0R7 540 aa11.72□□□□□ -0.53
IFT46-204ENST00000527868 HOXB7P09629 217 aa11.72□□□□□ -0.53
IFT46-204ENST00000527868 MSL1Q68DK7 614 aa11.72□□□□□ -0.53
IFT46-204ENST00000527868 WDR63Q8IWG1 891 aa11.72□□□□□ -0.53
IFT46-204ENST00000527868 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
IFT46-204ENST00000527868 ZNF521Q96K83 1311 aa11.71□□□□□ -0.53
IFT46-204ENST00000527868 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
IFT46-204ENST00000527868 NBPF10Q6P3W6 841 aaKnown RBP11.71□□□□□ -0.53
IFT46-204ENST00000527868 NLGN1Q8N2Q7 840 aa11.71□□□□□ -0.53
IFT46-204ENST00000527868 NBPF15Q8N660 670 aa11.71□□□□□ -0.53
IFT46-204ENST00000527868 ARXQ96QS3 562 aa11.71□□□□□ -0.53
IFT46-204ENST00000527868 PPP1R1BQ9UD71 204 aaPredicted RBP11.71□□□□□ -0.53
IFT46-204ENST00000527868 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.53
IFT46-204ENST00000527868 ZPR1O75312 459 aa11.7□□□□□ -0.54
IFT46-204ENST00000527868 PIP4K2AP48426 406 aaPredicted RBP11.7□□□□□ -0.54
IFT46-204ENST00000527868 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
IFT46-204ENST00000527868 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms