RNA–Protein interactions for RNA: ENST00000527574.1

AP003396.4-201, humanhuman

BASIC

Gene AP003396.4, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003396.4-201ENST00000527574 NFATC2IPQ8NCF5 419 aa8.09□□□□□ -1.11
AP003396.4-201ENST00000527574 RNF25Q96BH1 459 aaPredicted RBP8.09□□□□□ -1.11
AP003396.4-201ENST00000527574 PHF12Q96QT6 1004 aa8.09□□□□□ -1.11
AP003396.4-201ENST00000527574 PNNQ9H307 717 aaKnown RBP8.09□□□□□ -1.11
AP003396.4-201ENST00000527574 SLC52A2Q9HAB3 445 aa8.09□□□□□ -1.11
AP003396.4-201ENST00000527574 GNAT3A8MTJ3 354 aa8.08□□□□□ -1.12
AP003396.4-201ENST00000527574 PTCD1O75127 700 aaKnown RBP8.08□□□□□ -1.12
AP003396.4-201ENST00000527574 EVX2Q03828 476 aa8.08□□□□□ -1.12
AP003396.4-201ENST00000527574 CNGB1Q14028 1251 aaPredicted RBP8.08□□□□□ -1.12
AP003396.4-201ENST00000527574 LINC00116Q8NCU8 138 aa8.08□□□□□ -1.12
AP003396.4-201ENST00000527574 RTF1Q92541 710 aaKnown RBP8.08□□□□□ -1.12
AP003396.4-201ENST00000527574 TEX13AQ9BXU3 409 aaPredicted RBP8.08□□□□□ -1.12
AP003396.4-201ENST00000527574 COL24A1Q17RW2 1714 aa8.08□□□□□ -1.12
AP003396.4-201ENST00000527574 KDM6AO15550 1401 aaPredicted RBP8.07□□□□□ -1.12
AP003396.4-201ENST00000527574 ZPR1O75312 459 aa8.07□□□□□ -1.12
AP003396.4-201ENST00000527574 RPS6KA4O75676 772 aa8.07□□□□□ -1.12
AP003396.4-201ENST00000527574 STARD3NLO95772 234 aa8.07□□□□□ -1.12
AP003396.4-201ENST00000527574 CCDC87Q9NVE4 849 aa8.07□□□□□ -1.12
AP003396.4-201ENST00000527574 PARP3Q9Y6F1 533 aa8.07□□□□□ -1.12
AP003396.4-201ENST00000527574 CHD4Q14839 1912 aa8.07□□□□□ -1.12
AP003396.4-201ENST00000527574 UBR3Q6ZT12 1888 aa8.06□□□□□ -1.12
AP003396.4-201ENST00000527574 RNMTO43148 476 aaKnown RBP8.06□□□□□ -1.12
AP003396.4-201ENST00000527574 CRKLP46109 303 aaKnown RBP8.06□□□□□ -1.12
AP003396.4-201ENST00000527574 ITPK1Q13572 414 aa8.06□□□□□ -1.12
AP003396.4-201ENST00000527574 VSIG10Q8N0Z9 540 aa8.06□□□□□ -1.12
AP003396.4-201ENST00000527574 KIF12Q96FN5 646 aa8.06□□□□□ -1.12
AP003396.4-201ENST00000527574 SCN11AQ9UI33 1791 aa8.06□□□□□ -1.12
AP003396.4-201ENST00000527574 A0A087WZG4 1122 aa8.05□□□□□ -1.12
AP003396.4-201ENST00000527574 RIOK3O14730 519 aaKnown RBP8.05□□□□□ -1.12
AP003396.4-201ENST00000527574 FCHSD2O94868 740 aa8.05□□□□□ -1.12
AP003396.4-201ENST00000527574 MMP10P09238 476 aa8.05□□□□□ -1.12
AP003396.4-201ENST00000527574 U2AF1L5P0DN76 240 aaPredicted RBP8.05□□□□□ -1.12
AP003396.4-201ENST00000527574 U2AF1Q01081 240 aaKnown RBP eCLIP8.05□□□□□ -1.12
AP003396.4-201ENST00000527574 GOLGB1Q14789 3259 aaKnown RBP8.04□□□□□ -1.12
AP003396.4-201ENST00000527574 CICQ96RK0 1608 aaPredicted RBP8.04□□□□□ -1.12
AP003396.4-201ENST00000527574 MAP3K13O43283 966 aa8.04□□□□□ -1.12
AP003396.4-201ENST00000527574 TGFB2P61812 414 aa8.04□□□□□ -1.12
AP003396.4-201ENST00000527574 MTHFSDQ2M296 383 aaKnown RBP8.04□□□□□ -1.12
AP003396.4-201ENST00000527574 PCDHB13Q9Y5F0 798 aa8.04□□□□□ -1.12
AP003396.4-201ENST00000527574 MRC1P22897 1456 aa8.04□□□□□ -1.12
AP003396.4-201ENST00000527574 MAPK8IP3Q9UPT6 1336 aa8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 COL5A3P25940 1745 aaPredicted RBP8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 NPHP1O15259 732 aa8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 HTATSF1O43719 755 aaKnown RBP8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 PRKAR2BP31323 418 aa8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 ZNF467Q7Z7K2 595 aaPredicted RBP8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 NLGN2Q8NFZ4 835 aa8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 ARHGEF1Q92888 912 aaKnown RBP8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 FMNL2Q96PY5 1086 aa8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 USP42Q9H9J4 1324 aaKnown RBP8.03□□□□□ -1.12
AP003396.4-201ENST00000527574 UTRNP46939 3433 aa8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 COL3A1P02461 1466 aaPredicted RBP8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 COL15A1P39059 1388 aa8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 GIGYF1O75420 1035 aaPredicted RBP8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 GYS1P13807 737 aa8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 PPP2R1AP30153 589 aa8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 ZNF790Q6PG37 636 aa8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 ZNF784Q8NCA9 323 aaPredicted RBP8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 PNISRQ8TF01 805 aaKnown RBP8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 LGR6Q9HBX8 967 aa8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 PCDHB8Q9UN66 801 aa8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 PDZRN3Q9UPQ7 1066 aa8.02□□□□□ -1.13
AP003396.4-201ENST00000527574 BTBD11A6QL63 1104 aa8.01□□□□□ -1.13
AP003396.4-201ENST00000527574 RALBP1Q15311 655 aa8.01□□□□□ -1.13
AP003396.4-201ENST00000527574 IFNL1Q8IU54 200 aa8.01□□□□□ -1.13
AP003396.4-201ENST00000527574 DNAJC10Q8IXB1 793 aa8.01□□□□□ -1.13
AP003396.4-201ENST00000527574 NARFQ9UHQ1 456 aa8.01□□□□□ -1.13
AP003396.4-201ENST00000527574 HEG1Q9ULI3 1381 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 ADAMTS7Q9UKP4 1686 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 CYP19A1P11511 503 aaPredicted RBP8□□□□□ -1.13
AP003396.4-201ENST00000527574 LMOD3Q0VAK6 560 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 SLC39A6Q13433 755 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 MS4A3Q96HJ5 214 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 SLC4A9Q96Q91 983 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 RSPH6AQ9H0K4 717 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 PIM2Q9P1W9 311 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 TAOK2Q9UL54 1235 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 ZNF652Q9Y2D9 606 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 C10orf71Q711Q0 1435 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 C4AP0C0L4 1744 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 TJP1Q07157 1748 aa8□□□□□ -1.13
AP003396.4-201ENST00000527574 SOS1Q07889 1333 aaPredicted RBP8□□□□□ -1.13
AP003396.4-201ENST00000527574 CEMIPQ8WUJ3 1361 aa7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 VIRMAQ69YN4 1812 aaKnown RBP7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 YBX3P16989 372 aaKnown RBP eCLIP7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 CANXP27824 592 aaKnown RBP7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 ZEB1P37275 1124 aaPredicted RBP7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 IL6STP40189 918 aaPredicted RBP7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 USPL1Q5W0Q7 1092 aa7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 INTS5Q6P9B9 1019 aaKnown RBP7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 AMIGO3Q86WK7 504 aa7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 GPBP1L1Q9HC44 474 aaPredicted RBP7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 BCS1LQ9Y276 419 aa7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 ZNF330Q9Y3S2 320 aaPredicted RBP7.99□□□□□ -1.13
AP003396.4-201ENST00000527574 KCPQ6ZWJ8 1503 aa7.98□□□□□ -1.13
AP003396.4-201ENST00000527574 UBR2Q8IWV8 1755 aa7.98□□□□□ -1.13
AP003396.4-201ENST00000527574 SNRPA1P09661 255 aaKnown RBP7.98□□□□□ -1.13
AP003396.4-201ENST00000527574 WDR43Q15061 677 aaKnown RBP eCLIP7.98□□□□□ -1.13
AP003396.4-201ENST00000527574 DALRD3Q5D0E6 543 aaKnown RBP7.98□□□□□ -1.13
AP003396.4-201ENST00000527574 PXDNLA1KZ92 1463 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms