RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 ZNF592Q92610 1267 aa6.33□□□□□ -1.4
CLNS1A-208ENST00000527265 CNKSR1Q969H4 720 aa6.33□□□□□ -1.4
CLNS1A-208ENST00000527265 ESYT1Q9BSJ8 1104 aa6.33□□□□□ -1.4
CLNS1A-208ENST00000527265 TRAK2O60296 914 aa6.32□□□□□ -1.4
CLNS1A-208ENST00000527265 GNRH1P01148 92 aa6.32□□□□□ -1.4
CLNS1A-208ENST00000527265 FBXO31Q5XUX0 539 aaPredicted RBP6.32□□□□□ -1.4
CLNS1A-208ENST00000527265 TRIM11Q96F44 468 aa6.32□□□□□ -1.4
CLNS1A-208ENST00000527265 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLNS1A-208ENST00000527265 AVENQ9NQS1 362 aaPredicted RBP6.32□□□□□ -1.4
CLNS1A-208ENST00000527265 RAB6BQ9NRW1 208 aa6.32□□□□□ -1.4
CLNS1A-208ENST00000527265 A6NJR5 290 aa6.31□□□□□ -1.4
CLNS1A-208ENST00000527265 RAD21O60216 631 aa6.31□□□□□ -1.4
CLNS1A-208ENST00000527265 MSX1P28360 303 aa6.31□□□□□ -1.4
CLNS1A-208ENST00000527265 CENPCQ03188 943 aa6.31□□□□□ -1.4
CLNS1A-208ENST00000527265 CLUAP1Q96AJ1 413 aa6.31□□□□□ -1.4
CLNS1A-208ENST00000527265 TRAIPQ9BWF2 469 aa6.31□□□□□ -1.4
CLNS1A-208ENST00000527265 PAX4O43316 350 aa6.3□□□□□ -1.4
CLNS1A-208ENST00000527265 EPS8L1Q8TE68 723 aa6.3□□□□□ -1.4
CLNS1A-208ENST00000527265 CRISPLD1Q9H336 500 aa6.3□□□□□ -1.4
CLNS1A-208ENST00000527265 NDFIP2Q9NV92 336 aa6.3□□□□□ -1.4
CLNS1A-208ENST00000527265 PCDHB11Q9Y5F2 797 aa6.3□□□□□ -1.4
CLNS1A-208ENST00000527265 PCDHGC4Q9Y5F7 938 aa6.3□□□□□ -1.4
CLNS1A-208ENST00000527265 ZBBXA8MT70 800 aa6.29□□□□□ -1.4
CLNS1A-208ENST00000527265 YBX3P16989 372 aaKnown RBP eCLIP6.29□□□□□ -1.4
CLNS1A-208ENST00000527265 ALAS2P22557 587 aa6.29□□□□□ -1.4
CLNS1A-208ENST00000527265 TXKP42681 527 aa6.29□□□□□ -1.4
CLNS1A-208ENST00000527265 OSBPL3Q9H4L5 887 aa6.29□□□□□ -1.4
CLNS1A-208ENST00000527265 MYCP01106 439 aaPredicted RBP6.28□□□□□ -1.4
CLNS1A-208ENST00000527265 RFC5P40937 340 aa6.28□□□□□ -1.4
CLNS1A-208ENST00000527265 SCTRP47872 440 aa6.28□□□□□ -1.4
CLNS1A-208ENST00000527265 MCCD1P59942 119 aaPredicted RBP6.28□□□□□ -1.4
CLNS1A-208ENST00000527265 C4orf17Q53FE4 359 aa6.28□□□□□ -1.4
CLNS1A-208ENST00000527265 TBC1D9Q6ZT07 1266 aa6.28□□□□□ -1.4
CLNS1A-208ENST00000527265 RGS22Q8NE09 1264 aa6.28□□□□□ -1.4
CLNS1A-208ENST00000527265 PRR12Q9ULL5 1215 aa6.28□□□□□ -1.4
CLNS1A-208ENST00000527265 HYAL3O43820 417 aaPredicted RBP6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 IGSF3O75054 1194 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 H2AFB1P0C5Y9 115 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 H2AFB2P0C5Z0 115 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 USP17L8P0C7I0 530 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 TRIM28Q13263 835 aaKnown RBP6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 MCM6Q14566 821 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 ESCO1Q5FWF5 840 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 FAM182BQ5T319 152 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 MCTP1Q6DN14 999 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 FCHSD1Q86WN1 690 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 AEBP1Q8IUX7 1158 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 RHBDD1Q8TEB9 315 aa6.27□□□□□ -1.41
CLNS1A-208ENST00000527265 ATXN7O15265 892 aaPredicted RBP6.26□□□□□ -1.41
CLNS1A-208ENST00000527265 IL2RAP01589 272 aa6.26□□□□□ -1.41
CLNS1A-208ENST00000527265 NLRP8Q86W28 1048 aa6.26□□□□□ -1.41
CLNS1A-208ENST00000527265 ZCCHC2Q9C0B9 1178 aaKnown RBP6.26□□□□□ -1.41
CLNS1A-208ENST00000527265 HMX1Q9NP08 348 aaPredicted RBP6.26□□□□□ -1.41
CLNS1A-208ENST00000527265 ZNF330Q9Y3S2 320 aaPredicted RBP6.26□□□□□ -1.41
CLNS1A-208ENST00000527265 C1orf216Q8TAB5 229 aa6.25□□□□□ -1.41
CLNS1A-208ENST00000527265 MTMR7Q9Y216 660 aa6.25□□□□□ -1.41
CLNS1A-208ENST00000527265 DCDC2BA2VCK2 349 aa6.24□□□□□ -1.41
CLNS1A-208ENST00000527265 CD33P20138 364 aa6.24□□□□□ -1.41
CLNS1A-208ENST00000527265 PCBP4P57723 403 aaKnown RBP6.24□□□□□ -1.41
CLNS1A-208ENST00000527265 TMEM259Q4ZIN3 620 aa6.24□□□□□ -1.41
CLNS1A-208ENST00000527265 TMCO4Q5TGY1 634 aa6.24□□□□□ -1.41
CLNS1A-208ENST00000527265 ZNF468Q5VIY5 522 aaPredicted RBP6.24□□□□□ -1.41
CLNS1A-208ENST00000527265 C9orf172C9J069 976 aa6.23□□□□□ -1.41
CLNS1A-208ENST00000527265 KHNYNO15037 678 aaKnown RBP6.23□□□□□ -1.41
CLNS1A-208ENST00000527265 MAPTP10636 758 aaKnown RBP6.23□□□□□ -1.41
CLNS1A-208ENST00000527265 BANK1Q8NDB2 785 aa6.23□□□□□ -1.41
CLNS1A-208ENST00000527265 XAGE2Q96GT9 111 aa6.23□□□□□ -1.41
CLNS1A-208ENST00000527265 ELOA3CA0A087WX78 387 aaPredicted RBP6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 ELOA3DA6NLF2 546 aaPredicted RBP6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 FBXO45P0C2W1 286 aa6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 ELNP15502 786 aa6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 PLA2G4AP47712 749 aa6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 ELOA3BQ3SY89 546 aa6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 ELOA3Q8NG57 546 aa6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 FHDC1Q9C0D6 1143 aaPredicted RBP6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 SNRKQ9NRH2 765 aa6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 KLF15Q9UIH9 416 aa6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 GJA3Q9Y6H8 435 aa6.22□□□□□ -1.41
CLNS1A-208ENST00000527265 FAM229AH3BQW9 127 aa6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 MFAP1P55081 439 aaKnown RBP6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 TLR1Q15399 786 aa6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 ARSJQ5FYB0 599 aaPredicted RBP6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 PROSER2Q86WR7 435 aaPredicted RBP6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 PPARGC1BQ86YN6 1023 aaKnown RBP6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 FOXD4L4Q8WXT5 416 aaPredicted RBP6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 AIDAQ96BJ3 306 aa6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 CCDC97Q96F63 343 aaPredicted RBP6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 DNAAF2Q9NVR5 837 aaKnown RBP6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 ZNF777Q9ULD5 760 aaPredicted RBP6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 HRH3Q9Y5N1 445 aa6.21□□□□□ -1.42
CLNS1A-208ENST00000527265 RBM25P49756 843 aaKnown RBP6.2□□□□□ -1.42
CLNS1A-208ENST00000527265 TNP2Q05952 138 aa6.2□□□□□ -1.42
CLNS1A-208ENST00000527265 RETREG2Q8NC44 543 aa6.2□□□□□ -1.42
CLNS1A-208ENST00000527265 ZNF428Q96B54 188 aa6.2□□□□□ -1.42
CLNS1A-208ENST00000527265 POM121Q96HA1 1249 aa6.2□□□□□ -1.42
CLNS1A-208ENST00000527265 SERPINA10Q9UK55 444 aa6.2□□□□□ -1.42
CLNS1A-208ENST00000527265 M0R082 166 aa6.19□□□□□ -1.42
CLNS1A-208ENST00000527265 NRG1Q02297 640 aaPredicted RBP6.19□□□□□ -1.42
CLNS1A-208ENST00000527265 GRIK4Q16099 956 aa6.19□□□□□ -1.42
CLNS1A-208ENST00000527265 NBPF1Q3BBV0 1214 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms