RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CYP19A1P11511 503 aaPredicted RBP21.34■■□□□ 1.01
CAPN1-205ENST00000526954 LINC00116Q8NCU8 138 aa21.34■■□□□ 1.01
CAPN1-205ENST00000526954 NUP188Q5SRE5 1749 aa21.34■■□□□ 1.01
CAPN1-205ENST00000526954 MYH14Q7Z406 1995 aaKnown RBP21.34■■□□□ 1.01
CAPN1-205ENST00000526954 C4BP0C0L5 1744 aa21.33■■□□□ 1.01
CAPN1-205ENST00000526954 ELL2O00472 640 aaPredicted RBP21.33■■□□□ 1.01
CAPN1-205ENST00000526954 VAMP4O75379 141 aa21.33■■□□□ 1.01
CAPN1-205ENST00000526954 CHMP4AQ9BY43 222 aa21.33■■□□□ 1.01
CAPN1-205ENST00000526954 RC3H1Q5TC82 1133 aaKnown RBP21.32■■□□□ 1
CAPN1-205ENST00000526954 CNTNAP4Q9C0A0 1308 aa21.31■■□□□ 1
CAPN1-205ENST00000526954 CACNA1FO60840 1977 aa21.31■■□□□ 1
CAPN1-205ENST00000526954 ERBB4Q15303 1308 aa21.3■■□□□ 1
CAPN1-205ENST00000526954 CRKLP46109 303 aaKnown RBP21.3■■□□□ 1
CAPN1-205ENST00000526954 ZNF428Q96B54 188 aa21.3■■□□□ 1
CAPN1-205ENST00000526954 EIF2S2P20042 333 aaKnown RBP21.29■■□□□ 1
CAPN1-205ENST00000526954 HDGFL1Q5TGJ6 251 aa21.29■■□□□ 1
CAPN1-205ENST00000526954 INTS5Q6P9B9 1019 aaKnown RBP21.29■■□□□ 1
CAPN1-205ENST00000526954 CCDC87Q9NVE4 849 aa21.29■■□□□ 1
CAPN1-205ENST00000526954 CCDC30Q5VVM6 783 aa21.28■■□□□ 1
CAPN1-205ENST00000526954 UBR3Q6ZT12 1888 aa21.27■■□□□ 1
CAPN1-205ENST00000526954 A1BGP04217 495 aa21.27■■□□□ 1
CAPN1-205ENST00000526954 AKT1S1Q96B36 256 aa21.26■□□□□ 0.99
CAPN1-205ENST00000526954 NBPF26B4DH59 902 aa21.25■□□□□ 0.99
CAPN1-205ENST00000526954 SOCS7O14512 581 aa21.25■□□□□ 0.99
CAPN1-205ENST00000526954 PDIA6Q15084 440 aa21.25■□□□□ 0.99
CAPN1-205ENST00000526954 NBPF14Q5TI25 921 aa21.25■□□□□ 0.99
CAPN1-205ENST00000526954 NBPF10Q6P3W6 841 aaKnown RBP21.25■□□□□ 0.99
CAPN1-205ENST00000526954 NBPF15Q8N660 670 aa21.25■□□□□ 0.99
CAPN1-205ENST00000526954 NECTIN2Q92692 538 aa21.25■□□□□ 0.99
CAPN1-205ENST00000526954 DDX21Q9NR30 783 aaKnown RBP eCLIP21.25■□□□□ 0.99
CAPN1-205ENST00000526954 DBF4Q9UBU7 674 aaPredicted RBP21.25■□□□□ 0.99
CAPN1-205ENST00000526954 ZBTB1Q9Y2K1 713 aa21.25■□□□□ 0.99
CAPN1-205ENST00000526954 RPS6KA4O75676 772 aa21.24■□□□□ 0.99
CAPN1-205ENST00000526954 ALDH1L2Q3SY69 923 aa21.24■□□□□ 0.99
CAPN1-205ENST00000526954 AK7Q96M32 723 aa21.24■□□□□ 0.99
CAPN1-205ENST00000526954 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
CAPN1-205ENST00000526954 TUBGCP6Q96RT7 1819 aa21.23■□□□□ 0.99
CAPN1-205ENST00000526954 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
CAPN1-205ENST00000526954 ZNF827Q17R98 1081 aa21.23■□□□□ 0.99
CAPN1-205ENST00000526954 CHPF2Q9P2E5 772 aa21.23■□□□□ 0.99
CAPN1-205ENST00000526954 GNPATO15228 680 aa21.22■□□□□ 0.99
CAPN1-205ENST00000526954 CANXP27824 592 aaKnown RBP21.22■□□□□ 0.99
CAPN1-205ENST00000526954 EIF5P55010 431 aaKnown RBP21.22■□□□□ 0.99
CAPN1-205ENST00000526954 SLC15A2Q16348 729 aa21.22■□□□□ 0.99
CAPN1-205ENST00000526954 LRP10Q7Z4F1 713 aa21.22■□□□□ 0.99
CAPN1-205ENST00000526954 STK31Q9BXU1 1019 aa21.22■□□□□ 0.99
CAPN1-205ENST00000526954 ANO8Q9HCE9 1232 aaPredicted RBP21.22■□□□□ 0.99
CAPN1-205ENST00000526954 RARSP54136 660 aaKnown RBP21.21■□□□□ 0.99
CAPN1-205ENST00000526954 PROSER3Q2NL68 480 aa21.21■□□□□ 0.99
CAPN1-205ENST00000526954 HYPKQ9NX55 129 aa21.21■□□□□ 0.99
CAPN1-205ENST00000526954 STK32BQ9NY57 414 aa21.21■□□□□ 0.99
CAPN1-205ENST00000526954 RTCBQ9Y3I0 505 aaKnown RBP21.21■□□□□ 0.99
CAPN1-205ENST00000526954 PIP4K2AP48426 406 aaPredicted RBP21.2■□□□□ 0.98
CAPN1-205ENST00000526954 SSH1Q8WYL5 1049 aa21.2■□□□□ 0.98
CAPN1-205ENST00000526954 ANXA1P04083 346 aa21.19■□□□□ 0.98
CAPN1-205ENST00000526954 SLC4A2P04920 1241 aa21.19■□□□□ 0.98
CAPN1-205ENST00000526954 MYL6BP14649 208 aa21.19■□□□□ 0.98
CAPN1-205ENST00000526954 ADRA2BP18089 450 aa21.19■□□□□ 0.98
CAPN1-205ENST00000526954 SSFA2P28290 1259 aa21.19■□□□□ 0.98
CAPN1-205ENST00000526954 BRPF1P55201 1214 aaPredicted RBP21.19■□□□□ 0.98
CAPN1-205ENST00000526954 AMIGO3Q86WK7 504 aa21.19■□□□□ 0.98
CAPN1-205ENST00000526954 TFCP2L1Q9NZI6 479 aa21.19■□□□□ 0.98
CAPN1-205ENST00000526954 TCERG1O14776 1098 aaKnown RBP21.18■□□□□ 0.98
CAPN1-205ENST00000526954 MRPL50Q8N5N7 158 aaKnown RBP21.18■□□□□ 0.98
CAPN1-205ENST00000526954 COL15A1P39059 1388 aa21.18■□□□□ 0.98
CAPN1-205ENST00000526954 FLAD1Q8NFF5 587 aa21.17■□□□□ 0.98
CAPN1-205ENST00000526954 C4AP0C0L4 1744 aa21.17■□□□□ 0.98
CAPN1-205ENST00000526954 A0A087WZG4 1122 aa21.16■□□□□ 0.98
CAPN1-205ENST00000526954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.16■□□□□ 0.98
CAPN1-205ENST00000526954 TRAPPC3LQ5T215 181 aa21.16■□□□□ 0.98
CAPN1-205ENST00000526954 SMC4Q9NTJ3 1288 aa21.16■□□□□ 0.98
CAPN1-205ENST00000526954 NPM2Q86SE8 214 aaKnown RBP21.15■□□□□ 0.98
CAPN1-205ENST00000526954 ARHGEF1Q92888 912 aaKnown RBP21.15■□□□□ 0.98
CAPN1-205ENST00000526954 PHAXQ9H814 394 aaKnown RBP21.15■□□□□ 0.98
CAPN1-205ENST00000526954 RCAN3Q9UKA8 241 aa21.15■□□□□ 0.98
CAPN1-205ENST00000526954 PNPLA7Q6ZV29 1317 aa21.14■□□□□ 0.97
CAPN1-205ENST00000526954 COPS6Q7L5N1 327 aa21.14■□□□□ 0.97
CAPN1-205ENST00000526954 XAGE3Q8WTP9 111 aa21.14■□□□□ 0.97
CAPN1-205ENST00000526954 ZNF330Q9Y3S2 320 aaPredicted RBP21.14■□□□□ 0.97
CAPN1-205ENST00000526954 SMIM5Q71RC9 77 aa21.13■□□□□ 0.97
CAPN1-205ENST00000526954 G2E3Q7L622 706 aa21.13■□□□□ 0.97
CAPN1-205ENST00000526954 BCL2L13Q9BXK5 485 aa21.13■□□□□ 0.97
CAPN1-205ENST00000526954 BCORQ6W2J9 1755 aa21.13■□□□□ 0.97
CAPN1-205ENST00000526954 BCAR3O75815 825 aa21.12■□□□□ 0.97
CAPN1-205ENST00000526954 PHF14O94880 888 aa21.12■□□□□ 0.97
CAPN1-205ENST00000526954 FLIIQ13045 1269 aa21.12■□□□□ 0.97
CAPN1-205ENST00000526954 TTLL7Q6ZT98 887 aa21.12■□□□□ 0.97
CAPN1-205ENST00000526954 DZIP3Q86Y13 1208 aaKnown RBP21.12■□□□□ 0.97
CAPN1-205ENST00000526954 COL23A1Q86Y22 540 aaPredicted RBP21.12■□□□□ 0.97
CAPN1-205ENST00000526954 NARFQ9UHQ1 456 aa21.12■□□□□ 0.97
CAPN1-205ENST00000526954 ERVV-1B6SEH8 477 aa21.11■□□□□ 0.97
CAPN1-205ENST00000526954 RGL2O15211 777 aa21.11■□□□□ 0.97
CAPN1-205ENST00000526954 RFC4P35249 363 aa21.11■□□□□ 0.97
CAPN1-205ENST00000526954 SCN7AQ01118 1682 aa21.11■□□□□ 0.97
CAPN1-205ENST00000526954 PTPRCP08575 1304 aa21.1■□□□□ 0.97
CAPN1-205ENST00000526954 MAP3K15Q6ZN16 1313 aa21.1■□□□□ 0.97
CAPN1-205ENST00000526954 KIF16BQ96L93 1317 aa21.1■□□□□ 0.97
CAPN1-205ENST00000526954 DDX58O95786 925 aaKnown RBP21.1■□□□□ 0.97
CAPN1-205ENST00000526954 AIMP1Q12904 312 aaKnown RBP21.1■□□□□ 0.97
CAPN1-205ENST00000526954 KIF6Q6ZMV9 814 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms