RNA–Protein interactions for RNA: ENST00000526481.6

CTSB-211, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-211ENST00000526481 SLC4A9Q96Q91 983 aa18.78■□□□□ 0.6
CTSB-211ENST00000526481 RREB1Q92766 1687 aa18.78■□□□□ 0.6
CTSB-211ENST00000526481 CACNA1FO60840 1977 aa18.77■□□□□ 0.6
CTSB-211ENST00000526481 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.6
CTSB-211ENST00000526481 SPDYE4A6NLX3 237 aa18.76■□□□□ 0.59
CTSB-211ENST00000526481 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
CTSB-211ENST00000526481 TWISTNBQ3B726 338 aaPredicted RBP18.75■□□□□ 0.59
CTSB-211ENST00000526481 GIGYF1O75420 1035 aaPredicted RBP18.74■□□□□ 0.59
CTSB-211ENST00000526481 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
CTSB-211ENST00000526481 NUP188Q5SRE5 1749 aa18.74■□□□□ 0.59
CTSB-211ENST00000526481 VAMP4O75379 141 aa18.73■□□□□ 0.59
CTSB-211ENST00000526481 SMARCC1Q92922 1105 aaPredicted RBP18.73■□□□□ 0.59
CTSB-211ENST00000526481 C4BP0C0L5 1744 aa18.72■□□□□ 0.59
CTSB-211ENST00000526481 LOC102724428A0A0B4J2F2 783 aa18.72■□□□□ 0.59
CTSB-211ENST00000526481 TCERG1O14776 1098 aaKnown RBP18.72■□□□□ 0.59
CTSB-211ENST00000526481 KCNQ4P56696 695 aa18.72■□□□□ 0.59
CTSB-211ENST00000526481 SIK1P57059 783 aa18.72■□□□□ 0.59
CTSB-211ENST00000526481 DNAJC10Q8IXB1 793 aa18.72■□□□□ 0.59
CTSB-211ENST00000526481 NECTIN2Q92692 538 aa18.72■□□□□ 0.59
CTSB-211ENST00000526481 ITPK1Q13572 414 aa18.71■□□□□ 0.59
CTSB-211ENST00000526481 HOXB7P09629 217 aa18.7■□□□□ 0.58
CTSB-211ENST00000526481 SNRPA1P09661 255 aaKnown RBP18.7■□□□□ 0.58
CTSB-211ENST00000526481 ILDR2Q71H61 639 aa18.7■□□□□ 0.58
CTSB-211ENST00000526481 USP16Q9Y5T5 823 aa18.7■□□□□ 0.58
CTSB-211ENST00000526481 UBR3Q6ZT12 1888 aa18.69■□□□□ 0.58
CTSB-211ENST00000526481 APBA3O96018 575 aa18.69■□□□□ 0.58
CTSB-211ENST00000526481 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
CTSB-211ENST00000526481 HDGFL1Q5TGJ6 251 aa18.69■□□□□ 0.58
CTSB-211ENST00000526481 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
CTSB-211ENST00000526481 CT47B1P0C2W7 299 aaPredicted RBP18.68■□□□□ 0.58
CTSB-211ENST00000526481 ATP6V1AP38606 617 aa18.68■□□□□ 0.58
CTSB-211ENST00000526481 CHRDL2Q6WN34 429 aa18.68■□□□□ 0.58
CTSB-211ENST00000526481 VSIG10Q8N0Z9 540 aa18.68■□□□□ 0.58
CTSB-211ENST00000526481 CCNL1Q9UK58 526 aaPredicted RBP18.68■□□□□ 0.58
CTSB-211ENST00000526481 C4AP0C0L4 1744 aa18.67■□□□□ 0.58
CTSB-211ENST00000526481 CENPBP07199 599 aaPredicted RBP18.67■□□□□ 0.58
CTSB-211ENST00000526481 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
CTSB-211ENST00000526481 RARSP54136 660 aaKnown RBP18.67■□□□□ 0.58
CTSB-211ENST00000526481 LINC00116Q8NCU8 138 aa18.67■□□□□ 0.58
CTSB-211ENST00000526481 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
CTSB-211ENST00000526481 RCAN3Q9UKA8 241 aa18.67■□□□□ 0.58
CTSB-211ENST00000526481 SOS1Q07889 1333 aaPredicted RBP18.67■□□□□ 0.58
CTSB-211ENST00000526481 ANXA1P04083 346 aa18.66■□□□□ 0.58
CTSB-211ENST00000526481 PROSER3Q2NL68 480 aa18.66■□□□□ 0.58
CTSB-211ENST00000526481 LRRC4BQ9NT99 713 aa18.66■□□□□ 0.58
CTSB-211ENST00000526481 CHPF2Q9P2E5 772 aa18.66■□□□□ 0.58
CTSB-211ENST00000526481 ARFGEF2Q9Y6D5 1785 aa18.65■□□□□ 0.58
CTSB-211ENST00000526481 PITPNM1O00562 1244 aa18.65■□□□□ 0.58
CTSB-211ENST00000526481 BCAR3O75815 825 aa18.65■□□□□ 0.58
CTSB-211ENST00000526481 CYP19A1P11511 503 aaPredicted RBP18.65■□□□□ 0.58
CTSB-211ENST00000526481 BCORQ6W2J9 1755 aa18.65■□□□□ 0.58
CTSB-211ENST00000526481 N4BP2Q86UW6 1770 aaPredicted RBP18.65■□□□□ 0.58
CTSB-211ENST00000526481 TXNRD1Q16881 649 aa18.64■□□□□ 0.57
CTSB-211ENST00000526481 DEFB132Q7Z7B7 95 aa18.64■□□□□ 0.57
CTSB-211ENST00000526481 PROM2Q8N271 834 aa18.64■□□□□ 0.57
CTSB-211ENST00000526481 SMC4Q9NTJ3 1288 aa18.64■□□□□ 0.57
CTSB-211ENST00000526481 NBPF26B4DH59 902 aa18.63■□□□□ 0.57
CTSB-211ENST00000526481 PLSCR1O15162 318 aa18.63■□□□□ 0.57
CTSB-211ENST00000526481 A1BGP04217 495 aa18.63■□□□□ 0.57
CTSB-211ENST00000526481 EN1Q05925 392 aaPredicted RBP18.63■□□□□ 0.57
CTSB-211ENST00000526481 PDIA6Q15084 440 aa18.63■□□□□ 0.57
CTSB-211ENST00000526481 NBPF14Q5TI25 921 aa18.63■□□□□ 0.57
CTSB-211ENST00000526481 CCDC30Q5VVM6 783 aa18.63■□□□□ 0.57
CTSB-211ENST00000526481 NBPF10Q6P3W6 841 aaKnown RBP18.63■□□□□ 0.57
CTSB-211ENST00000526481 MRPL50Q8N5N7 158 aaKnown RBP18.63■□□□□ 0.57
CTSB-211ENST00000526481 NBPF15Q8N660 670 aa18.63■□□□□ 0.57
CTSB-211ENST00000526481 ZBTB1Q9Y2K1 713 aa18.63■□□□□ 0.57
CTSB-211ENST00000526481 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
CTSB-211ENST00000526481 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
CTSB-211ENST00000526481 EZH2Q15910 746 aaKnown RBP18.62■□□□□ 0.57
CTSB-211ENST00000526481 ALDH1L2Q3SY69 923 aa18.62■□□□□ 0.57
CTSB-211ENST00000526481 G2E3Q7L622 706 aa18.62■□□□□ 0.57
CTSB-211ENST00000526481 CNTNAP4Q9C0A0 1308 aa18.61■□□□□ 0.57
CTSB-211ENST00000526481 LRP10Q7Z4F1 713 aa18.61■□□□□ 0.57
CTSB-211ENST00000526481 ZNF428Q96B54 188 aa18.61■□□□□ 0.57
CTSB-211ENST00000526481 CAMKK2Q96RR4 588 aa18.61■□□□□ 0.57
CTSB-211ENST00000526481 TEX13AQ9BXU3 409 aaPredicted RBP18.61■□□□□ 0.57
CTSB-211ENST00000526481 QSER1Q2KHR3 1735 aa18.6■□□□□ 0.57
CTSB-211ENST00000526481 ERBB4Q15303 1308 aa18.6■□□□□ 0.57
CTSB-211ENST00000526481 STARD3NLO95772 234 aa18.6■□□□□ 0.57
CTSB-211ENST00000526481 MYL6BP14649 208 aa18.6■□□□□ 0.57
CTSB-211ENST00000526481 SF3B2Q13435 895 aaKnown RBP18.6■□□□□ 0.57
CTSB-211ENST00000526481 SLC27A3Q5K4L6 730 aa18.6■□□□□ 0.57
CTSB-211ENST00000526481 INTS5Q6P9B9 1019 aaKnown RBP18.6■□□□□ 0.57
CTSB-211ENST00000526481 UPF1Q92900 1129 aaKnown RBP eCLIP18.6■□□□□ 0.572e-29■■■■■ 151.5
CTSB-211ENST00000526481 STK31Q9BXU1 1019 aa18.6■□□□□ 0.57
CTSB-211ENST00000526481 CCDC87Q9NVE4 849 aa18.6■□□□□ 0.57
CTSB-211ENST00000526481 ANKRD36CQ5JPF3 1778 aa18.6■□□□□ 0.57
CTSB-211ENST00000526481 BAG6P46379 1132 aa18.59■□□□□ 0.57
CTSB-211ENST00000526481 PHAXQ9H814 394 aaKnown RBP18.59■□□□□ 0.57
CTSB-211ENST00000526481 DDX21Q9NR30 783 aaKnown RBP eCLIP18.59■□□□□ 0.57
CTSB-211ENST00000526481 NUP98P52948 1817 aa18.58■□□□□ 0.57
CTSB-211ENST00000526481 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.57
CTSB-211ENST00000526481 CANXP27824 592 aaKnown RBP18.58■□□□□ 0.56
CTSB-211ENST00000526481 DBF4Q9UBU7 674 aaPredicted RBP18.58■□□□□ 0.56
CTSB-211ENST00000526481 TNNQ9UQP3 1299 aa18.58■□□□□ 0.56
CTSB-211ENST00000526481 ZNF827Q17R98 1081 aa18.57■□□□□ 0.56
CTSB-211ENST00000526481 SMIM5Q71RC9 77 aa18.57■□□□□ 0.56
CTSB-211ENST00000526481 AMIGO3Q86WK7 504 aa18.57■□□□□ 0.56
CTSB-211ENST00000526481 SPDYE1Q8NFV5 336 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms