RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
TRAPPC4-205ENST00000525079 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
TRAPPC4-205ENST00000525079 STARD3NLO95772 234 aa17■□□□□ 0.31
TRAPPC4-205ENST00000525079 CCDC146Q8IYE0 955 aa17■□□□□ 0.31
TRAPPC4-205ENST00000525079 CD2APQ9Y5K6 639 aa17■□□□□ 0.31
TRAPPC4-205ENST00000525079 USP42Q9H9J4 1324 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-205ENST00000525079 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
TRAPPC4-205ENST00000525079 FKBP8Q14318 412 aa16.99■□□□□ 0.31
TRAPPC4-205ENST00000525079 TAF7Q15545 349 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC4-205ENST00000525079 USPL1Q5W0Q7 1092 aa16.99■□□□□ 0.31
TRAPPC4-205ENST00000525079 ZPR1O75312 459 aa16.98■□□□□ 0.31
TRAPPC4-205ENST00000525079 WDR43Q15061 677 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAPPC4-205ENST00000525079 TEX13AQ9BXU3 409 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC4-205ENST00000525079 WWC3Q9ULE0 1092 aa16.98■□□□□ 0.31
TRAPPC4-205ENST00000525079 A1BGP04217 495 aa16.97■□□□□ 0.31
TRAPPC4-205ENST00000525079 YY1P25490 414 aa16.97■□□□□ 0.31
TRAPPC4-205ENST00000525079 RIPK4P57078 832 aa16.97■□□□□ 0.31
TRAPPC4-205ENST00000525079 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
TRAPPC4-205ENST00000525079 ZNF330Q9Y3S2 320 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC4-205ENST00000525079 USP16Q9Y5T5 823 aa16.97■□□□□ 0.31
TRAPPC4-205ENST00000525079 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
TRAPPC4-205ENST00000525079 COL15A1P39059 1388 aa16.97■□□□□ 0.31
TRAPPC4-205ENST00000525079 ADAMTS8Q9UP79 889 aa16.96■□□□□ 0.31
TRAPPC4-205ENST00000525079 YBX3P16989 372 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRAPPC4-205ENST00000525079 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
TRAPPC4-205ENST00000525079 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC4-205ENST00000525079 EIF5P55010 431 aaKnown RBP16.95■□□□□ 0.3
TRAPPC4-205ENST00000525079 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
TRAPPC4-205ENST00000525079 NARFQ9UHQ1 456 aa16.95■□□□□ 0.3
TRAPPC4-205ENST00000525079 DDR1Q08345 913 aa16.94■□□□□ 0.3
TRAPPC4-205ENST00000525079 BCL2L12Q9HB09 334 aa16.94■□□□□ 0.3
TRAPPC4-205ENST00000525079 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
TRAPPC4-205ENST00000525079 TM4SF1P30408 202 aa16.93■□□□□ 0.3
TRAPPC4-205ENST00000525079 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
TRAPPC4-205ENST00000525079 TBC1D2BQ9UPU7 963 aa16.93■□□□□ 0.3
TRAPPC4-205ENST00000525079 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
TRAPPC4-205ENST00000525079 A0A087WZG4 1122 aa16.91■□□□□ 0.3
TRAPPC4-205ENST00000525079 A0A0G2JLW4 131 aa16.91■□□□□ 0.3
TRAPPC4-205ENST00000525079 IL6STP40189 918 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC4-205ENST00000525079 NFIXQ14938 502 aa16.91■□□□□ 0.3
TRAPPC4-205ENST00000525079 CCDC184Q52MB2 194 aa16.91■□□□□ 0.3
TRAPPC4-205ENST00000525079 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
TRAPPC4-205ENST00000525079 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
TRAPPC4-205ENST00000525079 N4BP2Q86UW6 1770 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC4-205ENST00000525079 C10orf71Q711Q0 1435 aa16.9■□□□□ 0.3
TRAPPC4-205ENST00000525079 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
TRAPPC4-205ENST00000525079 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
TRAPPC4-205ENST00000525079 KIF13BQ9NQT8 1826 aa16.89■□□□□ 0.29
TRAPPC4-205ENST00000525079 PXDNLA1KZ92 1463 aa16.89■□□□□ 0.29
TRAPPC4-205ENST00000525079 EIF4A1P60842 406 aaKnown RBP16.89■□□□□ 0.29
TRAPPC4-205ENST00000525079 KIAA1551Q9HCM1 1747 aa16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 NBPF26B4DH59 902 aa16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 GRIN3BO60391 1043 aa16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 DPEP1P16444 411 aa16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 TGFB2P61812 414 aa16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 LMOD3Q0VAK6 560 aa16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 NBPF10Q6P3W6 841 aaKnown RBP16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 DZIP3Q86Y13 1208 aaKnown RBP16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 NBPF15Q8N660 670 aa16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 TSPYL4Q9UJ04 414 aa16.88■□□□□ 0.29
TRAPPC4-205ENST00000525079 GIGYF1O75420 1035 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC4-205ENST00000525079 SERPINB2P05120 415 aa16.87■□□□□ 0.29
TRAPPC4-205ENST00000525079 TBC1D9BQ66K14 1250 aa16.87■□□□□ 0.29
TRAPPC4-205ENST00000525079 TRIM35Q9UPQ4 493 aa16.87■□□□□ 0.29
TRAPPC4-205ENST00000525079 CHD4Q14839 1912 aa16.87■□□□□ 0.29
TRAPPC4-205ENST00000525079 CAMTA2O94983 1202 aa16.86■□□□□ 0.29
TRAPPC4-205ENST00000525079 NGEFQ8N5V2 710 aa16.86■□□□□ 0.29
TRAPPC4-205ENST00000525079 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
TRAPPC4-205ENST00000525079 AFDNP55196 1824 aaKnown RBP16.86■□□□□ 0.29
TRAPPC4-205ENST00000525079 ANP32CO43423 234 aa16.85■□□□□ 0.29
TRAPPC4-205ENST00000525079 CHRNA5P30532 468 aa16.85■□□□□ 0.29
TRAPPC4-205ENST00000525079 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
TRAPPC4-205ENST00000525079 SCN7AQ01118 1682 aa16.85■□□□□ 0.29
TRAPPC4-205ENST00000525079 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
TRAPPC4-205ENST00000525079 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
TRAPPC4-205ENST00000525079 APAF1O14727 1248 aa16.84■□□□□ 0.29
TRAPPC4-205ENST00000525079 KCNA3P22001 575 aa16.84■□□□□ 0.29
TRAPPC4-205ENST00000525079 CCDC24Q8N4L8 307 aa16.83■□□□□ 0.28
TRAPPC4-205ENST00000525079 MYL6BP14649 208 aa16.82■□□□□ 0.28
TRAPPC4-205ENST00000525079 EIF2S2P20042 333 aaKnown RBP16.82■□□□□ 0.28
TRAPPC4-205ENST00000525079 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
TRAPPC4-205ENST00000525079 NRXN2Q9P2S2 1712 aa16.82■□□□□ 0.28
TRAPPC4-205ENST00000525079 CARMIL3Q8ND23 1372 aa16.81■□□□□ 0.28
TRAPPC4-205ENST00000525079 KRT24Q2M2I5 525 aa16.81■□□□□ 0.28
TRAPPC4-205ENST00000525079 SETDB2Q96T68 719 aa16.81■□□□□ 0.28
TRAPPC4-205ENST00000525079 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
TRAPPC4-205ENST00000525079 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
TRAPPC4-205ENST00000525079 CHL1O00533 1208 aa16.8■□□□□ 0.28
TRAPPC4-205ENST00000525079 HLFQ16534 295 aa16.8■□□□□ 0.28
TRAPPC4-205ENST00000525079 ZNF784Q8NCA9 323 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC4-205ENST00000525079 NECTIN2Q92692 538 aa16.8■□□□□ 0.28
TRAPPC4-205ENST00000525079 PIM2Q9P1W9 311 aa16.8■□□□□ 0.28
TRAPPC4-205ENST00000525079 PRR5LQ6MZQ0 368 aa16.79■□□□□ 0.28
TRAPPC4-205ENST00000525079 TTLL7Q6ZT98 887 aa16.79■□□□□ 0.28
TRAPPC4-205ENST00000525079 BRCA1P38398 1863 aaKnown RBP16.79■□□□□ 0.28
TRAPPC4-205ENST00000525079 NPHP1O15259 732 aa16.78■□□□□ 0.28
TRAPPC4-205ENST00000525079 ARHGAP27Q6ZUM4 889 aa16.78■□□□□ 0.28
TRAPPC4-205ENST00000525079 C2CD5Q86YS7 1000 aa16.78■□□□□ 0.28
TRAPPC4-205ENST00000525079 ZNF652Q9Y2D9 606 aa16.78■□□□□ 0.28
TRAPPC4-205ENST00000525079 FAM177BA6PVY3 158 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms