RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PROSER3Q2NL68 480 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 ARHGEF1Q92888 912 aaKnown RBP5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 CFAP44Q96MT7 982 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 CCDC87Q9NVE4 849 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 IFT57Q9NWB7 429 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 DLG5Q8TDM6 1919 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 FANCIQ9NVI1 1328 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 NBPF26B4DH59 902 aa5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 RPS6KA4O75676 772 aa5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 AIMP1Q12904 312 aaKnown RBP5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 CCDC27Q2M243 656 aa5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 DUSP27Q5VZP5 1158 aa5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 NBPF10Q6P3W6 841 aaKnown RBP5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 NBPF15Q8N660 670 aa5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 TBC1D2BQ9UPU7 963 aa5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 RTCBQ9Y3I0 505 aaKnown RBP5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 PAPPAQ13219 1627 aa5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 KAT6BQ8WYB5 2073 aa5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 ZNF521Q96K83 1311 aa5.98□□□□□ -1.45
CHMP4A-202ENST00000524955 LY75O60449 1722 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 C4BP0C0L5 1744 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 TJP1Q07157 1748 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 STARD3NLO95772 234 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 CALD1Q05682 793 aaKnown RBP5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 GOLGA2Q08379 1002 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 TRAPPC3LQ5T215 181 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 BICDL1Q6ZP65 573 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 TTLL7Q6ZT98 887 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 WDR63Q8IWG1 891 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 VSIG10Q8N0Z9 540 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 KLHL34Q8N239 644 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 CHPF2Q9P2E5 772 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 SIPA1L3O60292 1781 aaPredicted RBP5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 C5P01031 1676 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 SOS1Q07889 1333 aaPredicted RBP5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 CNTNAP4Q9C0A0 1308 aa5.97□□□□□ -1.45
CHMP4A-202ENST00000524955 FAM177BA6PVY3 158 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 SSFA2P28290 1259 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 RFC4P35249 363 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 SLFN5Q08AF3 891 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 FKBP8Q14318 412 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 PDIA6Q15084 440 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 TWISTNBQ3B726 338 aaPredicted RBP5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 RC3H1Q5TC82 1133 aaKnown RBP5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 HDGFL1Q5TGJ6 251 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 USPL1Q5W0Q7 1092 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 CCDC24Q8N4L8 307 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 BCL2L13Q9BXK5 485 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 ZBTB3Q9H5J0 574 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 PHAXQ9H814 394 aaKnown RBP5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 WWC3Q9ULE0 1092 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 IL16Q14005 1332 aa5.96□□□□□ -1.46
CHMP4A-202ENST00000524955 COL15A1P39059 1388 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 VIRMAQ69YN4 1812 aaKnown RBP5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 GYS1P13807 737 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 EIF5P55010 431 aaKnown RBP5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 HLFQ16534 295 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 G2E3Q7L622 706 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 DZIP3Q86Y13 1208 aaKnown RBP5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 XAGE3Q8WTP9 111 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 TEX13AQ9BXU3 409 aaPredicted RBP5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 MYH16Q9H6N6 1097 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 BCL2L12Q9HB09 334 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 BABAM1Q9NWV8 329 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 PPP1R1BQ9UD71 204 aaPredicted RBP5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 RGPD3A6NKT7 1758 aaPredicted RBP5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 KDM3BQ7LBC6 1761 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 RGPD4Q7Z3J3 1758 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 UBR2Q8IWV8 1755 aa5.95□□□□□ -1.46
CHMP4A-202ENST00000524955 E9PSI1 815 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 ZPR1O75312 459 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 VAMP4O75379 141 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 CAMTA2O94983 1202 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 MMP10P09238 476 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 IL6STP40189 918 aaPredicted RBP5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 PTGER2P43116 358 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 TBC1D9BQ66K14 1250 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 COPS6Q7L5N1 327 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 LRP10Q7Z4F1 713 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 NPM2Q86SE8 214 aaKnown RBP5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 SPON1Q9HCB6 807 aa5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 USP42Q9H9J4 1324 aaKnown RBP5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 COL5A3P25940 1745 aaPredicted RBP5.94□□□□□ -1.46
CHMP4A-202ENST00000524955 TAF1LQ8IZX4 1826 aa5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 TUBGCP6Q96RT7 1819 aa5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 SLC4A2P04920 1241 aa5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 GPTP24298 496 aa5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 DDR1Q08345 913 aa5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 NFIXQ14938 502 aa5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 FLAD1Q8NFF5 587 aa5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 MTFR1LQ9H019 292 aa5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 DDX21Q9NR30 783 aaKnown RBP eCLIP5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 DBF4Q9UBU7 674 aaPredicted RBP5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 NARFQ9UHQ1 456 aa5.93□□□□□ -1.46
CHMP4A-202ENST00000524955 ATP5J2-PTCD1G3V325 749 aa5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 ADRA2BP18089 450 aa5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 NCBP3Q53F19 620 aaKnown RBP5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 RTL5Q5HYW3 569 aaPredicted RBP5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 CCDC30Q5VVM6 783 aa5.92□□□□□ -1.46
CHMP4A-202ENST00000524955 KIF6Q6ZMV9 814 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms