RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 SNRPA1P09661 255 aaKnown RBP24.24■■□□□ 1.47
LMO1-203ENST00000524379 CYP19A1P11511 503 aaPredicted RBP24.24■■□□□ 1.47
LMO1-203ENST00000524379 ZNF827Q17R98 1081 aa24.24■■□□□ 1.47
LMO1-203ENST00000524379 LAMB4A4D0S4 1761 aa24.24■■□□□ 1.47
LMO1-203ENST00000524379 EXOSC9Q06265 439 aaKnown RBP24.23■■□□□ 1.47
LMO1-203ENST00000524379 DUSP27Q5VZP5 1158 aa24.23■■□□□ 1.47
LMO1-203ENST00000524379 AMIGO3Q86WK7 504 aa24.23■■□□□ 1.47
LMO1-203ENST00000524379 MYH16Q9H6N6 1097 aa24.23■■□□□ 1.47
LMO1-203ENST00000524379 MYH14Q7Z406 1995 aaKnown RBP24.23■■□□□ 1.47
LMO1-203ENST00000524379 STK32BQ9NY57 414 aa24.22■■□□□ 1.47
LMO1-203ENST00000524379 ELL2O00472 640 aaPredicted RBP24.21■■□□□ 1.47
LMO1-203ENST00000524379 INTS5Q6P9B9 1019 aaKnown RBP24.21■■□□□ 1.47
LMO1-203ENST00000524379 AKT1S1Q96B36 256 aa24.21■■□□□ 1.47
LMO1-203ENST00000524379 CNTNAP4Q9C0A0 1308 aa24.19■■□□□ 1.46
LMO1-203ENST00000524379 CRKLP46109 303 aaKnown RBP24.19■■□□□ 1.46
LMO1-203ENST00000524379 SLC15A2Q16348 729 aa24.19■■□□□ 1.46
LMO1-203ENST00000524379 SMIM5Q71RC9 77 aa24.19■■□□□ 1.46
LMO1-203ENST00000524379 PDGFDQ9GZP0 370 aaPredicted RBP24.19■■□□□ 1.46
LMO1-203ENST00000524379 A1BGP04217 495 aa24.18■■□□□ 1.46
LMO1-203ENST00000524379 TUBGCP6Q96RT7 1819 aa24.18■■□□□ 1.46
LMO1-203ENST00000524379 NBPF26B4DH59 902 aa24.17■■□□□ 1.46
LMO1-203ENST00000524379 PIP4K2AP48426 406 aaPredicted RBP24.17■■□□□ 1.46
LMO1-203ENST00000524379 NBPF10Q6P3W6 841 aaKnown RBP24.17■■□□□ 1.46
LMO1-203ENST00000524379 NBPF15Q8N660 670 aa24.17■■□□□ 1.46
LMO1-203ENST00000524379 TEX13AQ9BXU3 409 aaPredicted RBP24.17■■□□□ 1.46
LMO1-203ENST00000524379 ZBTB1Q9Y2K1 713 aa24.17■■□□□ 1.46
LMO1-203ENST00000524379 ZBTB7AO95365 584 aa24.16■■□□□ 1.46
LMO1-203ENST00000524379 HOXB7P09629 217 aa24.16■■□□□ 1.46
LMO1-203ENST00000524379 RC3H1Q5TC82 1133 aaKnown RBP24.16■■□□□ 1.46
LMO1-203ENST00000524379 CCDC87Q9NVE4 849 aa24.16■■□□□ 1.46
LMO1-203ENST00000524379 UBR3Q6ZT12 1888 aa24.15■■□□□ 1.46
LMO1-203ENST00000524379 VAMP4O75379 141 aa24.15■■□□□ 1.46
LMO1-203ENST00000524379 TWISTNBQ3B726 338 aaPredicted RBP24.15■■□□□ 1.46
LMO1-203ENST00000524379 NECTIN2Q92692 538 aa24.15■■□□□ 1.46
LMO1-203ENST00000524379 DCAF8L1A6NGE4 600 aa24.14■■□□□ 1.45
LMO1-203ENST00000524379 STARD3NLO95772 234 aa24.14■■□□□ 1.45
LMO1-203ENST00000524379 EIF2S2P20042 333 aaKnown RBP24.14■■□□□ 1.45
LMO1-203ENST00000524379 PDIA6Q15084 440 aa24.14■■□□□ 1.45
LMO1-203ENST00000524379 PROSER3Q2NL68 480 aa24.14■■□□□ 1.45
LMO1-203ENST00000524379 ATF5Q9Y2D1 282 aaPredicted RBP24.14■■□□□ 1.45
LMO1-203ENST00000524379 LRP10Q7Z4F1 713 aa24.13■■□□□ 1.45
LMO1-203ENST00000524379 SOS1Q07889 1333 aaPredicted RBP24.12■■□□□ 1.45
LMO1-203ENST00000524379 GNPATO15228 680 aa24.12■■□□□ 1.45
LMO1-203ENST00000524379 ANXA1P04083 346 aa24.11■■□□□ 1.45
LMO1-203ENST00000524379 HDGFL1Q5TGJ6 251 aa24.11■■□□□ 1.45
LMO1-203ENST00000524379 AK7Q96M32 723 aa24.11■■□□□ 1.45
LMO1-203ENST00000524379 CASZ1Q86V15 1759 aa24.11■■□□□ 1.45
LMO1-203ENST00000524379 TCERG1O14776 1098 aaKnown RBP24.1■■□□□ 1.45
LMO1-203ENST00000524379 RPS6KA4O75676 772 aa24.1■■□□□ 1.45
LMO1-203ENST00000524379 CANXP27824 592 aaKnown RBP24.1■■□□□ 1.45
LMO1-203ENST00000524379 PNPLA7Q6ZV29 1317 aa24.1■■□□□ 1.45
LMO1-203ENST00000524379 PTGER2P43116 358 aa24.09■■□□□ 1.45
LMO1-203ENST00000524379 EIF5P55010 431 aaKnown RBP24.09■■□□□ 1.45
LMO1-203ENST00000524379 CHPF2Q9P2E5 772 aa24.09■■□□□ 1.45
LMO1-203ENST00000524379 QSER1Q2KHR3 1735 aa24.09■■□□□ 1.45
LMO1-203ENST00000524379 ERBB4Q15303 1308 aa24.08■■□□□ 1.44
LMO1-203ENST00000524379 MTFR1LQ9H019 292 aa24.07■■□□□ 1.44
LMO1-203ENST00000524379 TFCP2L1Q9NZI6 479 aa24.07■■□□□ 1.44
LMO1-203ENST00000524379 C4AP0C0L4 1744 aa24.07■■□□□ 1.44
LMO1-203ENST00000524379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.06■■□□□ 1.44
LMO1-203ENST00000524379 PHF14O94880 888 aa24.06■■□□□ 1.44
LMO1-203ENST00000524379 IL6STP40189 918 aaPredicted RBP24.06■■□□□ 1.44
LMO1-203ENST00000524379 COL23A1Q86Y22 540 aaPredicted RBP24.06■■□□□ 1.44
LMO1-203ENST00000524379 COL15A1P39059 1388 aa24.05■■□□□ 1.44
LMO1-203ENST00000524379 DDX21Q9NR30 783 aaKnown RBP eCLIP24.05■■□□□ 1.44
LMO1-203ENST00000524379 RTCBQ9Y3I0 505 aaKnown RBP24.05■■□□□ 1.44
LMO1-203ENST00000524379 MYL6BP14649 208 aa24.04■■□□□ 1.44
LMO1-203ENST00000524379 YY1P25490 414 aa24.04■■□□□ 1.44
LMO1-203ENST00000524379 SSFA2P28290 1259 aa24.04■■□□□ 1.44
LMO1-203ENST00000524379 ARHGEF1Q92888 912 aaKnown RBP24.04■■□□□ 1.44
LMO1-203ENST00000524379 CCDC30Q5VVM6 783 aa24.03■■□□□ 1.44
LMO1-203ENST00000524379 HMGB2P26583 209 aaKnown RBP24.02■■□□□ 1.44
LMO1-203ENST00000524379 TTLL7Q6ZT98 887 aa24.02■■□□□ 1.44
LMO1-203ENST00000524379 G2E3Q7L622 706 aa24.02■■□□□ 1.44
LMO1-203ENST00000524379 SSH1Q8WYL5 1049 aa24.02■■□□□ 1.44
LMO1-203ENST00000524379 DBF4Q9UBU7 674 aaPredicted RBP24.02■■□□□ 1.44
LMO1-203ENST00000524379 SGIP1Q9BQI5 828 aa24.01■■□□□ 1.43
LMO1-203ENST00000524379 SRP68Q9UHB9 627 aaKnown RBP24.01■■□□□ 1.43
LMO1-203ENST00000524379 ZNF330Q9Y3S2 320 aaPredicted RBP24.01■■□□□ 1.43
LMO1-203ENST00000524379 CT47B1P0C2W7 299 aaPredicted RBP24■■□□□ 1.43
LMO1-203ENST00000524379 ADRA2BP18089 450 aa24■■□□□ 1.43
LMO1-203ENST00000524379 TRAPPC3LQ5T215 181 aa24■■□□□ 1.43
LMO1-203ENST00000524379 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
LMO1-203ENST00000524379 XAGE3Q8WTP9 111 aa23.99■■□□□ 1.43
LMO1-203ENST00000524379 SYT17Q9BSW7 474 aa23.99■■□□□ 1.43
LMO1-203ENST00000524379 FHDC1Q9C0D6 1143 aaPredicted RBP23.99■■□□□ 1.43
LMO1-203ENST00000524379 TBC1D2BQ9UPU7 963 aa23.99■■□□□ 1.43
LMO1-203ENST00000524379 SLC4A2P04920 1241 aa23.98■■□□□ 1.43
LMO1-203ENST00000524379 RARSP54136 660 aaKnown RBP23.98■■□□□ 1.43
LMO1-203ENST00000524379 COPS6Q7L5N1 327 aa23.98■■□□□ 1.43
LMO1-203ENST00000524379 MRPL50Q8N5N7 158 aaKnown RBP23.98■■□□□ 1.43
LMO1-203ENST00000524379 ARXQ96QS3 562 aa23.98■■□□□ 1.43
LMO1-203ENST00000524379 BCL2L13Q9BXK5 485 aa23.98■■□□□ 1.43
LMO1-203ENST00000524379 BCL2L12Q9HB09 334 aa23.98■■□□□ 1.43
LMO1-203ENST00000524379 USP42Q9H9J4 1324 aaKnown RBP23.98■■□□□ 1.43
LMO1-203ENST00000524379 SCN7AQ01118 1682 aa23.98■■□□□ 1.43
LMO1-203ENST00000524379 CAMTA2O94983 1202 aa23.97■■□□□ 1.43
LMO1-203ENST00000524379 BCORQ6W2J9 1755 aa23.97■■□□□ 1.43
LMO1-203ENST00000524379 HYPKQ9NX55 129 aa23.97■■□□□ 1.43
LMO1-203ENST00000524379 SLC16A10Q8TF71 515 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms