RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 CD2APQ9Y5K6 639 aa27.53■■■□□ 2
TRAPPC9-215ENST00000524162 USP42Q9H9J4 1324 aaKnown RBP27.52■■■□□ 2
TRAPPC9-215ENST00000524162 GYS1P13807 737 aa27.52■■■□□ 2
TRAPPC9-215ENST00000524162 RIPK4P57078 832 aa27.52■■■□□ 2
TRAPPC9-215ENST00000524162 DCAF8L1A6NGE4 600 aa27.51■■□□□ 1.99
TRAPPC9-215ENST00000524162 ANP32CO43423 234 aa27.51■■□□□ 1.99
TRAPPC9-215ENST00000524162 SNRPA1P09661 255 aaKnown RBP27.51■■□□□ 1.99
TRAPPC9-215ENST00000524162 ZBTB1Q9Y2K1 713 aa27.51■■□□□ 1.99
TRAPPC9-215ENST00000524162 KCNQ3O43525 872 aa27.5■■□□□ 1.99
TRAPPC9-215ENST00000524162 KIF13BQ9NQT8 1826 aa27.5■■□□□ 1.99
TRAPPC9-215ENST00000524162 COL15A1P39059 1388 aa27.49■■□□□ 1.99
TRAPPC9-215ENST00000524162 EIF5P55010 431 aaKnown RBP27.49■■□□□ 1.99
TRAPPC9-215ENST00000524162 LAMB4A4D0S4 1761 aa27.48■■□□□ 1.99
TRAPPC9-215ENST00000524162 IL6STP40189 918 aaPredicted RBP27.48■■□□□ 1.99
TRAPPC9-215ENST00000524162 NARFQ9UHQ1 456 aa27.48■■□□□ 1.99
TRAPPC9-215ENST00000524162 A0A087WZG4 1122 aa27.47■■□□□ 1.99
TRAPPC9-215ENST00000524162 GOLGB1Q14789 3259 aaKnown RBP27.45■■□□□ 1.99
TRAPPC9-215ENST00000524162 ZPR1O75312 459 aa27.45■■□□□ 1.98
TRAPPC9-215ENST00000524162 MMP10P09238 476 aa27.45■■□□□ 1.98
TRAPPC9-215ENST00000524162 CCDC146Q8IYE0 955 aa27.45■■□□□ 1.98
TRAPPC9-215ENST00000524162 UTRNP46939 3433 aa27.43■■□□□ 1.98
TRAPPC9-215ENST00000524162 THUMPD2Q9BTF0 503 aaKnown RBP27.43■■□□□ 1.98
TRAPPC9-215ENST00000524162 USP16Q9Y5T5 823 aa27.43■■□□□ 1.98
TRAPPC9-215ENST00000524162 CANXP27824 592 aaKnown RBP27.42■■□□□ 1.98
TRAPPC9-215ENST00000524162 EIF4A1P60842 406 aaKnown RBP27.42■■□□□ 1.98
TRAPPC9-215ENST00000524162 TRIM35Q9UPQ4 493 aa27.42■■□□□ 1.98
TRAPPC9-215ENST00000524162 RGL2O15211 777 aa27.41■■□□□ 1.98
TRAPPC9-215ENST00000524162 SRP68Q9UHB9 627 aaKnown RBP27.41■■□□□ 1.98
TRAPPC9-215ENST00000524162 SCN7AQ01118 1682 aa27.4■■□□□ 1.98
TRAPPC9-215ENST00000524162 GIGYF1O75420 1035 aaPredicted RBP27.4■■□□□ 1.98
TRAPPC9-215ENST00000524162 MIS18AQ9NYP9 233 aa27.4■■□□□ 1.98
TRAPPC9-215ENST00000524162 TM4SF1P30408 202 aa27.39■■□□□ 1.98
TRAPPC9-215ENST00000524162 FKBP8Q14318 412 aa27.39■■□□□ 1.98
TRAPPC9-215ENST00000524162 NCBP3Q53F19 620 aaKnown RBP27.39■■□□□ 1.98
TRAPPC9-215ENST00000524162 PARP3Q9Y6F1 533 aa27.39■■□□□ 1.98
TRAPPC9-215ENST00000524162 CHD4Q14839 1912 aa27.39■■□□□ 1.97
TRAPPC9-215ENST00000524162 A1BGP04217 495 aa27.38■■□□□ 1.97
TRAPPC9-215ENST00000524162 USPL1Q5W0Q7 1092 aa27.38■■□□□ 1.97
TRAPPC9-215ENST00000524162 TSPYL4Q9UJ04 414 aa27.38■■□□□ 1.97
TRAPPC9-215ENST00000524162 RRP7AQ9Y3A4 280 aaKnown RBP27.38■■□□□ 1.97
TRAPPC9-215ENST00000524162 C10orf71Q711Q0 1435 aa27.38■■□□□ 1.97
TRAPPC9-215ENST00000524162 CCDC184Q52MB2 194 aa27.37■■□□□ 1.97
TRAPPC9-215ENST00000524162 NPM2Q86SE8 214 aaKnown RBP27.37■■□□□ 1.97
TRAPPC9-215ENST00000524162 KLHL34Q8N239 644 aa27.37■■□□□ 1.97
TRAPPC9-215ENST00000524162 NLGN2Q8NFZ4 835 aa27.37■■□□□ 1.97
TRAPPC9-215ENST00000524162 NRXN2Q9P2S2 1712 aa27.37■■□□□ 1.97
TRAPPC9-215ENST00000524162 BCORQ6W2J9 1755 aa27.37■■□□□ 1.97
TRAPPC9-215ENST00000524162 CHL1O00533 1208 aa27.36■■□□□ 1.97
TRAPPC9-215ENST00000524162 BCL2L12Q9HB09 334 aa27.36■■□□□ 1.97
TRAPPC9-215ENST00000524162 PRAMEF22A3QJZ6 481 aa27.35■■□□□ 1.97
TRAPPC9-215ENST00000524162 TGFB2P61812 414 aa27.35■■□□□ 1.97
TRAPPC9-215ENST00000524162 NEUROD2Q15784 382 aa27.35■■□□□ 1.97
TRAPPC9-215ENST00000524162 MRS2Q9HD23 443 aa27.35■■□□□ 1.97
TRAPPC9-215ENST00000524162 KIAA1551Q9HCM1 1747 aa27.35■■□□□ 1.97
TRAPPC9-215ENST00000524162 ERBB4Q15303 1308 aa27.35■■□□□ 1.97
TRAPPC9-215ENST00000524162 AFDNP55196 1824 aaKnown RBP27.34■■□□□ 1.97
TRAPPC9-215ENST00000524162 APAF1O14727 1248 aa27.34■■□□□ 1.97
TRAPPC9-215ENST00000524162 CALD1Q05682 793 aaKnown RBP27.34■■□□□ 1.97
TRAPPC9-215ENST00000524162 POLRMTO00411 1230 aaKnown RBP27.33■■□□□ 1.97
TRAPPC9-215ENST00000524162 DDR1Q08345 913 aa27.32■■□□□ 1.96
TRAPPC9-215ENST00000524162 CFAP44Q96MT7 982 aa27.32■■□□□ 1.96
TRAPPC9-215ENST00000524162 NBPF26B4DH59 902 aa27.31■■□□□ 1.96
TRAPPC9-215ENST00000524162 NFIXQ14938 502 aa27.31■■□□□ 1.96
TRAPPC9-215ENST00000524162 NBPF10Q6P3W6 841 aaKnown RBP27.31■■□□□ 1.96
TRAPPC9-215ENST00000524162 CLEC4GQ6UXB4 293 aa27.31■■□□□ 1.96
TRAPPC9-215ENST00000524162 NBPF15Q8N660 670 aa27.31■■□□□ 1.96
TRAPPC9-215ENST00000524162 BRCA1P38398 1863 aaKnown RBP27.3■■□□□ 1.96
TRAPPC9-215ENST00000524162 CCDC27Q2M243 656 aa27.3■■□□□ 1.96
TRAPPC9-215ENST00000524162 GRIN3BO60391 1043 aa27.29■■□□□ 1.96
TRAPPC9-215ENST00000524162 CAMTA2O94983 1202 aa27.29■■□□□ 1.96
TRAPPC9-215ENST00000524162 GPR162Q16538 588 aa27.29■■□□□ 1.96
TRAPPC9-215ENST00000524162 DZIP3Q86Y13 1208 aaKnown RBP27.29■■□□□ 1.96
TRAPPC9-215ENST00000524162 TBC1D2BQ9UPU7 963 aa27.29■■□□□ 1.96
TRAPPC9-215ENST00000524162 PXDNLA1KZ92 1463 aa27.28■■□□□ 1.96
TRAPPC9-215ENST00000524162 ZNF853P0CG23 659 aa27.28■■□□□ 1.96
TRAPPC9-215ENST00000524162 HOXB7P09629 217 aa27.27■■□□□ 1.96
TRAPPC9-215ENST00000524162 IFT57Q9NWB7 429 aa27.26■■□□□ 1.95
TRAPPC9-215ENST00000524162 ZNF652Q9Y2D9 606 aa27.26■■□□□ 1.95
TRAPPC9-215ENST00000524162 ZNF330Q9Y3S2 320 aaPredicted RBP27.26■■□□□ 1.95
TRAPPC9-215ENST00000524162 N4BP2Q86UW6 1770 aaPredicted RBP27.26■■□□□ 1.95
TRAPPC9-215ENST00000524162 CARMIL3Q8ND23 1372 aa27.24■■□□□ 1.95
TRAPPC9-215ENST00000524162 GNAI1P63096 354 aa27.24■■□□□ 1.95
TRAPPC9-215ENST00000524162 ERVV-1B6SEH8 477 aa27.23■■□□□ 1.95
TRAPPC9-215ENST00000524162 SERPINB2P05120 415 aa27.23■■□□□ 1.95
TRAPPC9-215ENST00000524162 NUP98P52948 1817 aa27.23■■□□□ 1.95
TRAPPC9-215ENST00000524162 YBX3P16989 372 aaKnown RBP eCLIP27.22■■□□□ 1.955e-6■■■□□ 19.1
TRAPPC9-215ENST00000524162 TBC1D9BQ66K14 1250 aa27.22■■□□□ 1.95
TRAPPC9-215ENST00000524162 NGEFQ8N5V2 710 aa27.22■■□□□ 1.95
TRAPPC9-215ENST00000524162 ARFGEF1Q9Y6D6 1849 aa27.21■■□□□ 1.95
TRAPPC9-215ENST00000524162 PIP4K2AP48426 406 aaPredicted RBP27.21■■□□□ 1.95
TRAPPC9-215ENST00000524162 SETDB2Q96T68 719 aa27.21■■□□□ 1.95
TRAPPC9-215ENST00000524162 DLEC1Q9Y238 1755 aa27.2■■□□□ 1.95
TRAPPC9-215ENST00000524162 PDZRN3Q9UPQ7 1066 aa27.2■■□□□ 1.94
TRAPPC9-215ENST00000524162 LRP10Q7Z4F1 713 aa27.19■■□□□ 1.94
TRAPPC9-215ENST00000524162 MBIPQ9NS73 344 aa27.19■■□□□ 1.94
TRAPPC9-215ENST00000524162 PDIA6Q15084 440 aa27.18■■□□□ 1.94
TRAPPC9-215ENST00000524162 LAS1LQ9Y4W2 734 aaKnown RBP27.18■■□□□ 1.94
TRAPPC9-215ENST00000524162 IL16Q14005 1332 aa27.17■■□□□ 1.94
TRAPPC9-215ENST00000524162 MAP3K15Q6ZN16 1313 aa27.17■■□□□ 1.94
TRAPPC9-215ENST00000524162 DPEP1P16444 411 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms