RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 POLKQ9UBT6 870 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 FAM135BQ49AJ0 1406 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 K7ELQ4 463 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-227ENST00000523867 FBLN1P23142 703 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 TSPYL6Q8N831 410 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 PHACTR3Q96KR7 559 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 HDAC5Q9UQL6 1122 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 LRRC7Q96NW7 1537 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 PSEN1P49768 467 aa8.86□□□□□ -0.99
HDAC9-227ENST00000523867 ANKRD7Q92527 254 aa8.86□□□□□ -0.99
HDAC9-227ENST00000523867 IFT57Q9NWB7 429 aa8.86□□□□□ -0.99
HDAC9-227ENST00000523867 CD2BP2O95400 341 aaKnown RBP8.86□□□□□ -0.99
HDAC9-227ENST00000523867 SIRT2Q8IXJ6 389 aa8.86□□□□□ -0.99
HDAC9-227ENST00000523867 PIK3R4Q99570 1358 aa8.86□□□□□ -0.99
HDAC9-227ENST00000523867 A2ML1A8K2U0 1454 aa8.86□□□□□ -0.99
HDAC9-227ENST00000523867 PTCH1Q13635 1447 aa8.86□□□□□ -0.99
HDAC9-227ENST00000523867 PPFIA4O75335 1185 aa8.85□□□□□ -0.99
HDAC9-227ENST00000523867 CDC45O75419 566 aa8.85□□□□□ -0.99
HDAC9-227ENST00000523867 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-227ENST00000523867 RBM42Q9BTD8 480 aaKnown RBP8.85□□□□□ -0.99
HDAC9-227ENST00000523867 MBIPQ9NS73 344 aa8.85□□□□□ -0.99
HDAC9-227ENST00000523867 ABCC4O15439 1325 aa8.85□□□□□ -0.99
HDAC9-227ENST00000523867 CDC42BPGQ6DT37 1551 aa8.85□□□□□ -0.99
HDAC9-227ENST00000523867 SYCP1Q15431 976 aa8.85□□□□□ -0.99
HDAC9-227ENST00000523867 TWISTNBQ3B726 338 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-227ENST00000523867 MPNDQ8N594 471 aa8.85□□□□□ -0.99
HDAC9-227ENST00000523867 CLTCQ00610 1675 aaKnown RBP8.85□□□□□ -0.99
HDAC9-227ENST00000523867 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-227ENST00000523867 TSHZ1Q6ZSZ6 1077 aa8.84□□□□□ -0.99
HDAC9-227ENST00000523867 API5Q9BZZ5 524 aaKnown RBP8.84□□□□□ -0.99
HDAC9-227ENST00000523867 STAG3Q9UJ98 1225 aa8.84□□□□□ -0.99
HDAC9-227ENST00000523867 SLFN14P0C7P3 912 aa8.84□□□□□ -0.99
HDAC9-227ENST00000523867 VTI1AQ96AJ9 217 aa8.84□□□□□ -0.99
HDAC9-227ENST00000523867 ZNF853P0CG23 659 aa8.84□□□□□ -1
HDAC9-227ENST00000523867 LMOD3Q0VAK6 560 aa8.84□□□□□ -1
HDAC9-227ENST00000523867 GIMAP6Q6P9H5 292 aa8.84□□□□□ -1
HDAC9-227ENST00000523867 GAS2L2Q8NHY3 880 aa8.84□□□□□ -1
HDAC9-227ENST00000523867 FAM117AQ9C073 453 aa8.84□□□□□ -1
HDAC9-227ENST00000523867 BCL2L12Q9HB09 334 aa8.84□□□□□ -1
HDAC9-227ENST00000523867 EMILIN1Q9Y6C2 1016 aa8.84□□□□□ -1
HDAC9-227ENST00000523867 SSFA2P28290 1259 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 IL13P35225 146 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 C8orf58Q8NAV2 365 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 PIBF1Q8WXW3 757 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 KIAA1522Q9P206 1035 aaPredicted RBP8.83□□□□□ -1
HDAC9-227ENST00000523867 PPP1R1BQ9UD71 204 aaPredicted RBP8.83□□□□□ -1
HDAC9-227ENST00000523867 DDX49Q9Y6V7 483 aaKnown RBP8.83□□□□□ -1
HDAC9-227ENST00000523867 KIF20BQ96Q89 1820 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 TMEM131LA2VDJ0 1609 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 MYBPC2Q14324 1141 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 CTR9Q6PD62 1173 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 MTA3Q9BTC8 594 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 DIAPH3Q9NSV4 1193 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 PNMA2Q9UL42 364 aa8.83□□□□□ -1
HDAC9-227ENST00000523867 ARIH1Q9Y4X5 557 aaPredicted RBP8.83□□□□□ -1
HDAC9-227ENST00000523867 GSPT1P15170 499 aaKnown RBP8.82□□□□□ -1
HDAC9-227ENST00000523867 ARMCX6Q7L4S7 300 aa8.82□□□□□ -1
HDAC9-227ENST00000523867 WAPLQ7Z5K2 1190 aa8.82□□□□□ -1
HDAC9-227ENST00000523867 PLEKHM2Q8IWE5 1019 aa8.82□□□□□ -1
HDAC9-227ENST00000523867 RBSNQ9H1K0 784 aa8.82□□□□□ -1
HDAC9-227ENST00000523867 SPTLC3Q9NUV7 552 aa8.82□□□□□ -1
HDAC9-227ENST00000523867 MYO5BQ9ULV0 1848 aa8.82□□□□□ -1
HDAC9-227ENST00000523867 CTIFO43310 598 aaKnown RBP8.82□□□□□ -1
HDAC9-227ENST00000523867 POLD1P28340 1107 aa8.82□□□□□ -1
HDAC9-227ENST00000523867 RABEP1Q15276 862 aa8.82□□□□□ -1
HDAC9-227ENST00000523867 FBXO31Q5XUX0 539 aaPredicted RBP8.82□□□□□ -1
HDAC9-227ENST00000523867 DCTPP1Q9H773 170 aa8.82□□□□□ -1
HDAC9-227ENST00000523867 ALKQ9UM73 1620 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 ATP7BP35670 1465 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 APPP05067 770 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 CAPN2P17655 700 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 ZSCAN23Q3MJ62 389 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 KLHL42Q9P2K6 505 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 AMOTL2Q9Y2J4 779 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 MORC2Q9Y6X9 1032 aaPredicted RBP8.81□□□□□ -1
HDAC9-227ENST00000523867 FAM83GA6ND36 823 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 UBAP1LF5GYI3 381 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 BAG4O95429 457 aaKnown RBP8.81□□□□□ -1
HDAC9-227ENST00000523867 PAX3P23760 479 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 FKBP5Q13451 457 aaPredicted RBP8.81□□□□□ -1
HDAC9-227ENST00000523867 TERF2Q15554 542 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 CCDC96Q2M329 555 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 TTC22Q5TAA0 569 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 NME9Q86XW9 330 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 KIF24Q5T7B8 1368 aa8.81□□□□□ -1
HDAC9-227ENST00000523867 TRIM6-TRIM34B2RNG4 842 aa8.8□□□□□ -1
HDAC9-227ENST00000523867 TOM1O60784 492 aa8.8□□□□□ -1
HDAC9-227ENST00000523867 NOLC1Q14978 699 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC9-227ENST00000523867 INTS3Q68E01 1043 aaKnown RBP8.8□□□□□ -1
HDAC9-227ENST00000523867 TRIM34Q9BYJ4 488 aa8.8□□□□□ -1
HDAC9-227ENST00000523867 CARNS1A5YM72 827 aa8.8□□□□□ -1
HDAC9-227ENST00000523867 NUCB2P80303 420 aa8.8□□□□□ -1
HDAC9-227ENST00000523867 DCTN1Q14203 1278 aa8.8□□□□□ -1
HDAC9-227ENST00000523867 C16orf71Q8IYS4 520 aaPredicted RBP8.8□□□□□ -1
HDAC9-227ENST00000523867 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC9-227ENST00000523867 DDX41Q9UJV9 622 aaKnown RBP8.8□□□□□ -1
HDAC9-227ENST00000523867 RIMS2Q9UQ26 1411 aa8.8□□□□□ -1
HDAC9-227ENST00000523867 CDK12Q9NYV4 1490 aaPredicted RBP8.79□□□□□ -1
HDAC9-227ENST00000523867 NCKAP5LQ9HCH0 1330 aa8.79□□□□□ -1
HDAC9-227ENST00000523867 ONECUT3O60422 494 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms