RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 MTFR1LQ9H019 292 aa7.97□□□□□ -1.13
PABPC1-223ENST00000523636 COL14A1Q05707 1796 aaKnown RBP7.97□□□□□ -1.13
PABPC1-223ENST00000523636 AATKQ6ZMQ8 1374 aa7.97□□□□□ -1.13
PABPC1-223ENST00000523636 ROBO2Q9HCK4 1378 aa7.97□□□□□ -1.13
PABPC1-223ENST00000523636 CEP162Q5TB80 1403 aa7.96□□□□□ -1.13
PABPC1-223ENST00000523636 ARHGEF28Q8N1W1 1705 aaKnown RBP7.96□□□□□ -1.14
PABPC1-223ENST00000523636 MOXD2PA6NHM9 499 aa7.96□□□□□ -1.14
PABPC1-223ENST00000523636 HOXA2O43364 376 aa7.96□□□□□ -1.14
PABPC1-223ENST00000523636 CFHP08603 1231 aa7.96□□□□□ -1.14
PABPC1-223ENST00000523636 HSPA1AP0DMV8 641 aaKnown RBP7.96□□□□□ -1.14
PABPC1-223ENST00000523636 HSPA1BP0DMV9 641 aaKnown RBP7.96□□□□□ -1.14
PABPC1-223ENST00000523636 KMT5BQ4FZB7 885 aa7.96□□□□□ -1.14
PABPC1-223ENST00000523636 GRIPAP1Q4V328 841 aa7.96□□□□□ -1.14
PABPC1-223ENST00000523636 PROCA1Q8NCQ7 364 aaPredicted RBP7.96□□□□□ -1.14
PABPC1-223ENST00000523636 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.96□□□□□ -1.14
PABPC1-223ENST00000523636 BTG4Q9NY30 223 aa7.96□□□□□ -1.14
PABPC1-223ENST00000523636 SZT2Q5T011 3432 aa7.96□□□□□ -1.14
PABPC1-223ENST00000523636 RNF40O75150 1001 aa7.95□□□□□ -1.14
PABPC1-223ENST00000523636 TSPY4P0CV99 314 aa7.95□□□□□ -1.14
PABPC1-223ENST00000523636 TSPY10P0CW01 314 aa7.95□□□□□ -1.14
PABPC1-223ENST00000523636 UBTFP17480 764 aaKnown RBP7.95□□□□□ -1.14
PABPC1-223ENST00000523636 ESCO1Q5FWF5 840 aa7.95□□□□□ -1.14
PABPC1-223ENST00000523636 WNT2BQ93097 391 aa7.95□□□□□ -1.14
PABPC1-223ENST00000523636 LIMD1Q9UGP4 676 aa7.95□□□□□ -1.14
PABPC1-223ENST00000523636 CRYBG1Q9Y4K1 1723 aa7.95□□□□□ -1.14
PABPC1-223ENST00000523636 ERBINQ96RT1 1412 aa7.95□□□□□ -1.14
PABPC1-223ENST00000523636 CDC42BPGQ6DT37 1551 aa7.94□□□□□ -1.14
PABPC1-223ENST00000523636 PRPF38BQ5VTL8 546 aaKnown RBP7.94□□□□□ -1.14
PABPC1-223ENST00000523636 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
PABPC1-223ENST00000523636 TSR3Q9UJK0 312 aaKnown RBP7.94□□□□□ -1.14
PABPC1-223ENST00000523636 TNS3Q68CZ2 1445 aa7.94□□□□□ -1.14
PABPC1-223ENST00000523636 PAPPAQ13219 1627 aa7.93□□□□□ -1.14
PABPC1-223ENST00000523636 PLSCR1O15162 318 aa7.93□□□□□ -1.14
PABPC1-223ENST00000523636 ACTN4O43707 911 aaKnown RBP7.93□□□□□ -1.14
PABPC1-223ENST00000523636 ATP6V1AP38606 617 aa7.93□□□□□ -1.14
PABPC1-223ENST00000523636 FLIIQ13045 1269 aa7.93□□□□□ -1.14
PABPC1-223ENST00000523636 SPATA31A1Q5TZJ5 1347 aa7.93□□□□□ -1.14
PABPC1-223ENST00000523636 RRBP1Q9P2E9 1410 aaKnown RBP7.93□□□□□ -1.14
PABPC1-223ENST00000523636 RGPD8O14715 1765 aaPredicted RBP7.92□□□□□ -1.14
PABPC1-223ENST00000523636 FDX1P10109 184 aa7.92□□□□□ -1.14
PABPC1-223ENST00000523636 NDUFV2P19404 249 aa7.92□□□□□ -1.14
PABPC1-223ENST00000523636 PPP4CP60510 307 aa7.92□□□□□ -1.14
PABPC1-223ENST00000523636 FUT2Q10981 343 aa7.92□□□□□ -1.14
PABPC1-223ENST00000523636 SLC15A2Q16348 729 aa7.92□□□□□ -1.14
PABPC1-223ENST00000523636 KIF15Q9NS87 1388 aa7.92□□□□□ -1.14
PABPC1-223ENST00000523636 TECPR2O15040 1411 aa7.92□□□□□ -1.14
PABPC1-223ENST00000523636 PRAG1Q86YV5 1406 aa7.92□□□□□ -1.14
PABPC1-223ENST00000523636 IQGAP3Q86VI3 1631 aa7.92□□□□□ -1.14
PABPC1-223ENST00000523636 CUL9Q8IWT3 2517 aa7.91□□□□□ -1.14
PABPC1-223ENST00000523636 LILRB3O75022 631 aa7.91□□□□□ -1.14
PABPC1-223ENST00000523636 BCAMP50895 628 aa7.91□□□□□ -1.14
PABPC1-223ENST00000523636 HPS5Q9UPZ3 1129 aa7.91□□□□□ -1.14
PABPC1-223ENST00000523636 PHRF1Q9P1Y6 1649 aaKnown RBP7.91□□□□□ -1.14
PABPC1-223ENST00000523636 EEA1Q15075 1411 aa7.9□□□□□ -1.14
PABPC1-223ENST00000523636 TOMM70O94826 608 aa7.9□□□□□ -1.14
PABPC1-223ENST00000523636 RFC5P40937 340 aa7.9□□□□□ -1.14
PABPC1-223ENST00000523636 RGS19P49795 217 aa7.9□□□□□ -1.14
PABPC1-223ENST00000523636 TMEM259Q4ZIN3 620 aa7.9□□□□□ -1.14
PABPC1-223ENST00000523636 BANK1Q8NDB2 785 aa7.9□□□□□ -1.14
PABPC1-223ENST00000523636 ZBTB3Q9H5J0 574 aa7.9□□□□□ -1.14
PABPC1-223ENST00000523636 PARP4Q9UKK3 1724 aaKnown RBP7.89□□□□□ -1.15
PABPC1-223ENST00000523636 KIF1AQ12756 1690 aa7.89□□□□□ -1.15
PABPC1-223ENST00000523636 GRIN3BO60391 1043 aa7.89□□□□□ -1.15
PABPC1-223ENST00000523636 THSD4Q6ZMP0 1018 aa7.89□□□□□ -1.15
PABPC1-223ENST00000523636 NYAP1Q6ZVC0 841 aa7.89□□□□□ -1.15
PABPC1-223ENST00000523636 RNF166Q96A37 237 aaPredicted RBP7.89□□□□□ -1.15
PABPC1-223ENST00000523636 PCDHB15Q9Y5E8 787 aa7.89□□□□□ -1.15
PABPC1-223ENST00000523636 TUBGCP6Q96RT7 1819 aa7.89□□□□□ -1.15
PABPC1-223ENST00000523636 CCDC144AA2RUR9 1427 aa7.88□□□□□ -1.15
PABPC1-223ENST00000523636 KANK1Q14678 1352 aa7.88□□□□□ -1.15
PABPC1-223ENST00000523636 SPDYE5A6NIY4 337 aa7.88□□□□□ -1.15
PABPC1-223ENST00000523636 MORN1Q5T089 497 aa7.88□□□□□ -1.15
PABPC1-223ENST00000523636 KRT28Q7Z3Y7 464 aa7.88□□□□□ -1.15
PABPC1-223ENST00000523636 PCDHGC3Q9UN70 934 aa7.88□□□□□ -1.15
PABPC1-223ENST00000523636 TOPAZ1Q8N9V7 1692 aa7.88□□□□□ -1.15
PABPC1-223ENST00000523636 ALS2Q96Q42 1657 aa7.88□□□□□ -1.15
PABPC1-223ENST00000523636 LRPPRCP42704 1394 aaKnown RBP7.87□□□□□ -1.15
PABPC1-223ENST00000523636 TRPM3Q9HCF6 1732 aaPredicted RBP7.87□□□□□ -1.15
PABPC1-223ENST00000523636 FMN2Q9NZ56 1722 aa7.87□□□□□ -1.15
PABPC1-223ENST00000523636 E9PCH4 1651 aa7.87□□□□□ -1.15
PABPC1-223ENST00000523636 MLLT1Q03111 559 aaPredicted RBP7.87□□□□□ -1.15
PABPC1-223ENST00000523636 QPCTQ16769 361 aa7.87□□□□□ -1.15
PABPC1-223ENST00000523636 Q3C1V9 767 aa7.87□□□□□ -1.15
PABPC1-223ENST00000523636 TULP4Q9NRJ4 1543 aa7.87□□□□□ -1.15
PABPC1-223ENST00000523636 COL6A3P12111 3177 aa7.86□□□□□ -1.15
PABPC1-223ENST00000523636 MTMR2Q13614 643 aa7.86□□□□□ -1.15
PABPC1-223ENST00000523636 CSPP1Q1MSJ5 1256 aa7.86□□□□□ -1.15
PABPC1-223ENST00000523636 HLA-CQ95604 372 aa7.86□□□□□ -1.15
PABPC1-223ENST00000523636 RRP7BPQ9NSQ0 103 aa7.86□□□□□ -1.15
PABPC1-223ENST00000523636 SALL2Q9Y467 1007 aaPredicted RBP7.86□□□□□ -1.15
PABPC1-223ENST00000523636 QSER1Q2KHR3 1735 aa7.86□□□□□ -1.15
PABPC1-223ENST00000523636 GUCA2AQ02747 115 aa7.85□□□□□ -1.15
PABPC1-223ENST00000523636 MCM6Q14566 821 aa7.85□□□□□ -1.15
PABPC1-223ENST00000523636 KCTD12Q96CX2 325 aaKnown RBP7.85□□□□□ -1.15
PABPC1-223ENST00000523636 WBP1LQ9NX94 342 aa7.85□□□□□ -1.15
PABPC1-223ENST00000523636 STK32BQ9NY57 414 aa7.85□□□□□ -1.15
PABPC1-223ENST00000523636 NAIPQ13075 1403 aa7.85□□□□□ -1.15
PABPC1-223ENST00000523636 SBNO1A3KN83 1393 aa7.84□□□□□ -1.15
PABPC1-223ENST00000523636 ATP7BP35670 1465 aa7.84□□□□□ -1.15
PABPC1-223ENST00000523636 PDE3BQ13370 1112 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms