RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 CNTNAP1P78357 1384 aa6.77□□□□□ -1.33
CDKL3-209ENST00000523054 C6orf132Q5T0Z8 1188 aa6.77□□□□□ -1.33
CDKL3-209ENST00000523054 PDZRN3Q9UPQ7 1066 aa6.77□□□□□ -1.33
CDKL3-209ENST00000523054 CD2APQ9Y5K6 639 aa6.77□□□□□ -1.33
CDKL3-209ENST00000523054 MLLT3P42568 568 aaPredicted RBP6.76□□□□□ -1.33
CDKL3-209ENST00000523054 KRT28Q7Z3Y7 464 aa6.76□□□□□ -1.33
CDKL3-209ENST00000523054 EPAS1Q99814 870 aa6.76□□□□□ -1.33
CDKL3-209ENST00000523054 MCOLN1Q9GZU1 580 aa6.76□□□□□ -1.33
CDKL3-209ENST00000523054 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
CDKL3-209ENST00000523054 KANK1Q14678 1352 aa6.75□□□□□ -1.33
CDKL3-209ENST00000523054 PARP4Q9UKK3 1724 aaKnown RBP6.75□□□□□ -1.33
CDKL3-209ENST00000523054 TSPY4P0CV99 314 aa6.75□□□□□ -1.33
CDKL3-209ENST00000523054 TSPY10P0CW01 314 aa6.75□□□□□ -1.33
CDKL3-209ENST00000523054 PPP4CP60510 307 aa6.75□□□□□ -1.33
CDKL3-209ENST00000523054 NECTIN2Q92692 538 aa6.75□□□□□ -1.33
CDKL3-209ENST00000523054 KDM4CQ9H3R0 1056 aa6.75□□□□□ -1.33
CDKL3-209ENST00000523054 RRAGCQ9HB90 399 aa6.75□□□□□ -1.33
CDKL3-209ENST00000523054 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.75□□□□□ -1.33
CDKL3-209ENST00000523054 NRXN3Q9Y4C0 1643 aa6.75□□□□□ -1.33
CDKL3-209ENST00000523054 SOX10P56693 466 aa6.74□□□□□ -1.33
CDKL3-209ENST00000523054 PSME1Q06323 249 aa6.74□□□□□ -1.33
CDKL3-209ENST00000523054 MTRQ99707 1265 aa6.74□□□□□ -1.33
CDKL3-209ENST00000523054 USP35Q9P2H5 1018 aa6.74□□□□□ -1.33
CDKL3-209ENST00000523054 KCPQ6ZWJ8 1503 aa6.74□□□□□ -1.33
CDKL3-209ENST00000523054 ATP7BP35670 1465 aa6.74□□□□□ -1.33
CDKL3-209ENST00000523054 CDC42BPGQ6DT37 1551 aa6.74□□□□□ -1.33
CDKL3-209ENST00000523054 METP08581 1390 aa6.73□□□□□ -1.33
CDKL3-209ENST00000523054 PKD1L3Q7Z443 1732 aa6.73□□□□□ -1.33
CDKL3-209ENST00000523054 PRIM1P49642 420 aaKnown RBP6.73□□□□□ -1.33
CDKL3-209ENST00000523054 MAP2K1Q02750 393 aaPredicted RBP6.73□□□□□ -1.33
CDKL3-209ENST00000523054 PTF1AQ7RTS3 328 aa6.73□□□□□ -1.33
CDKL3-209ENST00000523054 AK7Q96M32 723 aa6.73□□□□□ -1.33
CDKL3-209ENST00000523054 IGSF1Q8N6C5 1336 aa6.73□□□□□ -1.33
CDKL3-209ENST00000523054 ZNF827Q17R98 1081 aa6.72□□□□□ -1.33
CDKL3-209ENST00000523054 STRN4Q9NRL3 753 aa6.72□□□□□ -1.33
CDKL3-209ENST00000523054 A0A0C4DFX4 3053 aa6.72□□□□□ -1.33
CDKL3-209ENST00000523054 SBNO1A3KN83 1393 aa6.72□□□□□ -1.33
CDKL3-209ENST00000523054 HFM1A2PYH4 1435 aa6.72□□□□□ -1.33
CDKL3-209ENST00000523054 APBB1O00213 710 aa6.72□□□□□ -1.33
CDKL3-209ENST00000523054 OSBPP22059 807 aa6.72□□□□□ -1.33
CDKL3-209ENST00000523054 VEGFBP49765 207 aa6.72□□□□□ -1.33
CDKL3-209ENST00000523054 MAP3K7O43318 606 aa6.71□□□□□ -1.34
CDKL3-209ENST00000523054 TCP11L2Q8N4U5 519 aa6.71□□□□□ -1.34
CDKL3-209ENST00000523054 PRDM11Q9NQV5 511 aa6.71□□□□□ -1.34
CDKL3-209ENST00000523054 BRD4O60885 1362 aaPredicted RBP6.71□□□□□ -1.34
CDKL3-209ENST00000523054 PHRF1Q9P1Y6 1649 aaKnown RBP6.71□□□□□ -1.34
CDKL3-209ENST00000523054 MEGF6O75095 1541 aa6.7□□□□□ -1.34
CDKL3-209ENST00000523054 TSR1Q2NL82 804 aaKnown RBP6.7□□□□□ -1.34
CDKL3-209ENST00000523054 PACS2Q86VP3 889 aa6.7□□□□□ -1.34
CDKL3-209ENST00000523054 SNX27Q96L92 541 aa6.7□□□□□ -1.34
CDKL3-209ENST00000523054 BCL11AQ9H165 835 aa6.7□□□□□ -1.34
CDKL3-209ENST00000523054 DGKZQ13574 1117 aa6.69□□□□□ -1.34
CDKL3-209ENST00000523054 RBM26Q5T8P6 1007 aaKnown RBP6.69□□□□□ -1.34
CDKL3-209ENST00000523054 BEGAINQ9BUH8 593 aa6.69□□□□□ -1.34
CDKL3-209ENST00000523054 TSKSQ9UJT2 592 aa6.69□□□□□ -1.34
CDKL3-209ENST00000523054 PNPLA7Q6ZV29 1317 aa6.69□□□□□ -1.34
CDKL3-209ENST00000523054 TUBGCP6Q96RT7 1819 aa6.69□□□□□ -1.34
CDKL3-209ENST00000523054 TRIM66O15016 1216 aa6.69□□□□□ -1.34
CDKL3-209ENST00000523054 ZNF516Q92618 1163 aa6.69□□□□□ -1.34
CDKL3-209ENST00000523054 THRAP3Q9Y2W1 955 aaKnown RBP6.69□□□□□ -1.34
CDKL3-209ENST00000523054 AKAP12Q02952 1782 aa6.68□□□□□ -1.34
CDKL3-209ENST00000523054 PDE4DQ08499 809 aa6.68□□□□□ -1.34
CDKL3-209ENST00000523054 SAMD7Q7Z3H4 446 aa6.68□□□□□ -1.34
CDKL3-209ENST00000523054 FAM117AQ9C073 453 aa6.68□□□□□ -1.34
CDKL3-209ENST00000523054 PRDM6Q9NQX0 595 aa6.68□□□□□ -1.34
CDKL3-209ENST00000523054 BCL9O00512 1426 aa6.68□□□□□ -1.34
CDKL3-209ENST00000523054 ROBO2Q9HCK4 1378 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 PLA2G5P39877 138 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 EVA1CP58658 441 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 C9orf131Q5VYM1 1079 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 CDHR5Q9HBB8 845 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 SSH2Q76I76 1423 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 CASKIN1Q8WXD9 1431 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 LRRC37A3O60309 1634 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 VEGFAP15692 232 aaPredicted RBP6.67□□□□□ -1.34
CDKL3-209ENST00000523054 GGCXP38435 758 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 ARHGAP27Q6ZUM4 889 aa6.67□□□□□ -1.34
CDKL3-209ENST00000523054 NUTM2FA1L443 756 aa6.66□□□□□ -1.34
CDKL3-209ENST00000523054 PDIA4P13667 645 aaKnown RBP6.66□□□□□ -1.34
CDKL3-209ENST00000523054 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
CDKL3-209ENST00000523054 SMYD5Q6GMV2 418 aa6.66□□□□□ -1.34
CDKL3-209ENST00000523054 TRIM67Q6ZTA4 783 aa6.66□□□□□ -1.34
CDKL3-209ENST00000523054 FAM122AQ96E09 287 aa6.66□□□□□ -1.34
CDKL3-209ENST00000523054 TMUB1Q9BVT8 246 aa6.66□□□□□ -1.34
CDKL3-209ENST00000523054 TFCP2L1Q9NZI6 479 aa6.66□□□□□ -1.34
CDKL3-209ENST00000523054 ERBINQ96RT1 1412 aa6.66□□□□□ -1.34
CDKL3-209ENST00000523054 FMN2Q9NZ56 1722 aa6.66□□□□□ -1.34
CDKL3-209ENST00000523054 IQGAP3Q86VI3 1631 aa6.66□□□□□ -1.34
CDKL3-209ENST00000523054 PIK3C2AO00443 1686 aa6.65□□□□□ -1.34
CDKL3-209ENST00000523054 PLEKHG3A1L390 1219 aa6.65□□□□□ -1.34
CDKL3-209ENST00000523054 DGAT1O75907 488 aa6.65□□□□□ -1.34
CDKL3-209ENST00000523054 DDB1Q16531 1140 aa6.65□□□□□ -1.34
CDKL3-209ENST00000523054 KRI1Q8N9T8 703 aaKnown RBP6.65□□□□□ -1.34
CDKL3-209ENST00000523054 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.34
CDKL3-209ENST00000523054 CASP8AP2Q9UKL3 1982 aa6.65□□□□□ -1.35
CDKL3-209ENST00000523054 TREML4Q6UXN2 200 aa6.64□□□□□ -1.35
CDKL3-209ENST00000523054 NKX2-3Q8TAU0 364 aa6.64□□□□□ -1.35
CDKL3-209ENST00000523054 NAIPQ13075 1403 aa6.64□□□□□ -1.35
CDKL3-209ENST00000523054 ZBTB7CA1YPR0 619 aa6.64□□□□□ -1.35
CDKL3-209ENST00000523054 PKDCCQ504Y2 493 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms