RNA–Protein interactions for RNA: ENST00000522073.5

TTC1-204, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 2

Gene TTC1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-204ENST00000522073 PTK2Q05397 1052 aa11.37□□□□□ -0.59
TTC1-204ENST00000522073 SKIV2LQ15477 1246 aaKnown RBP11.37□□□□□ -0.59
TTC1-204ENST00000522073 VWA5B2Q8N398 1253 aa11.37□□□□□ -0.59
TTC1-204ENST00000522073 INSM2Q96T92 566 aaPredicted RBP11.37□□□□□ -0.59
TTC1-204ENST00000522073 GPSM3Q9Y4H4 160 aa11.37□□□□□ -0.59
TTC1-204ENST00000522073 FER1L4A9Z1Z3 1794 aa11.36□□□□□ -0.59
TTC1-204ENST00000522073 WASHC2CQ9Y4E1 1318 aa11.35□□□□□ -0.59
TTC1-204ENST00000522073 RNF225M0QZC1 329 aaPredicted RBP11.35□□□□□ -0.59
TTC1-204ENST00000522073 PPP2R2DQ66LE6 453 aa11.35□□□□□ -0.59
TTC1-204ENST00000522073 SV2AQ7L0J3 742 aa11.35□□□□□ -0.59
TTC1-204ENST00000522073 ADAM32Q8TC27 787 aa11.35□□□□□ -0.59
TTC1-204ENST00000522073 WHAMMQ8TF30 809 aa11.35□□□□□ -0.59
TTC1-204ENST00000522073 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
TTC1-204ENST00000522073 PLXNC1O60486 1568 aa11.35□□□□□ -0.59
TTC1-204ENST00000522073 FAM50AQ14320 339 aaKnown RBP11.34□□□□□ -0.59
TTC1-204ENST00000522073 SVOPQ8N4V2 548 aa11.34□□□□□ -0.59
TTC1-204ENST00000522073 RNF217Q8TC41 542 aa11.34□□□□□ -0.59
TTC1-204ENST00000522073 NPATQ14207 1427 aa11.34□□□□□ -0.59
TTC1-204ENST00000522073 ARHGEF15O94989 841 aa11.33□□□□□ -0.6
TTC1-204ENST00000522073 PROCA1Q8NCQ7 364 aaPredicted RBP11.33□□□□□ -0.6
TTC1-204ENST00000522073 ZNF395Q9H8N7 513 aaPredicted RBP11.33□□□□□ -0.6
TTC1-204ENST00000522073 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
TTC1-204ENST00000522073 TMPRSS4Q9NRS4 437 aa11.33□□□□□ -0.6
TTC1-204ENST00000522073 RRP7BPQ9NSQ0 103 aa11.33□□□□□ -0.6
TTC1-204ENST00000522073 CHIC2Q9UKJ5 165 aa11.33□□□□□ -0.6
TTC1-204ENST00000522073 FGD6Q6ZV73 1430 aa11.33□□□□□ -0.6
TTC1-204ENST00000522073 ARHGEF5Q12774 1597 aa11.33□□□□□ -0.6
TTC1-204ENST00000522073 SENP3-EIF4A1A0A087X0R7 540 aa11.32□□□□□ -0.6
TTC1-204ENST00000522073 CDC14CA4D256 554 aa11.32□□□□□ -0.6
TTC1-204ENST00000522073 SH3D19Q5HYK7 790 aa11.32□□□□□ -0.6
TTC1-204ENST00000522073 NBPF20Q3BBV1 942 aa11.31□□□□□ -0.6
TTC1-204ENST00000522073 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
TTC1-204ENST00000522073 ABCC5O15440 1437 aa11.31□□□□□ -0.6
TTC1-204ENST00000522073 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
TTC1-204ENST00000522073 KIF15Q9NS87 1388 aa11.3□□□□□ -0.6
TTC1-204ENST00000522073 LILRA1O75019 489 aa11.3□□□□□ -0.6
TTC1-204ENST00000522073 PPARGC1BQ86YN6 1023 aaKnown RBP11.3□□□□□ -0.6
TTC1-204ENST00000522073 KDF1Q8NAX2 398 aaPredicted RBP11.3□□□□□ -0.6
TTC1-204ENST00000522073 DAPK1P53355 1430 aa11.29□□□□□ -0.6
TTC1-204ENST00000522073 ADH1AP07327 375 aa11.29□□□□□ -0.6
TTC1-204ENST00000522073 ADD1P35611 737 aaKnown RBP11.29□□□□□ -0.6
TTC1-204ENST00000522073 EPS8L1Q8TE68 723 aa11.29□□□□□ -0.6
TTC1-204ENST00000522073 TNRQ92752 1358 aa11.28□□□□□ -0.6
TTC1-204ENST00000522073 AP1G2O75843 785 aa11.28□□□□□ -0.6
TTC1-204ENST00000522073 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
TTC1-204ENST00000522073 FBXO41Q8TF61 875 aa11.28□□□□□ -0.6
TTC1-204ENST00000522073 KDM5DQ9BY66 1539 aa11.27□□□□□ -0.61
TTC1-204ENST00000522073 ERVH48-1M5A8F1 160 aa11.27□□□□□ -0.61
TTC1-204ENST00000522073 ANKRD30AQ9BXX3 1397 aa11.27□□□□□ -0.61
TTC1-204ENST00000522073 ADGBQ8N7X0 1667 aa11.27□□□□□ -0.61
TTC1-204ENST00000522073 TCOF1Q13428 1488 aaKnown RBP11.26□□□□□ -0.61
TTC1-204ENST00000522073 SHANK2Q9UPX8 1470 aa11.26□□□□□ -0.61
TTC1-204ENST00000522073 PTGIRP43119 386 aa11.26□□□□□ -0.61
TTC1-204ENST00000522073 RAB15P59190 212 aa11.26□□□□□ -0.61
TTC1-204ENST00000522073 HMX1Q9NP08 348 aaPredicted RBP11.26□□□□□ -0.61
TTC1-204ENST00000522073 C3P01024 1663 aa11.26□□□□□ -0.61
TTC1-204ENST00000522073 PREX1Q8TCU6 1659 aa11.26□□□□□ -0.61
TTC1-204ENST00000522073 NCOA1Q15788 1441 aa11.26□□□□□ -0.61
TTC1-204ENST00000522073 MAST1Q9Y2H9 1570 aa11.25□□□□□ -0.61
TTC1-204ENST00000522073 PTPN23Q9H3S7 1636 aa11.25□□□□□ -0.61
TTC1-204ENST00000522073 ESPNB1AK53 854 aa11.25□□□□□ -0.61
TTC1-204ENST00000522073 DZIP3Q86Y13 1208 aaKnown RBP11.25□□□□□ -0.61
TTC1-204ENST00000522073 FAM117AQ9C073 453 aa11.25□□□□□ -0.61
TTC1-204ENST00000522073 PZPP20742 1482 aa11.25□□□□□ -0.61
TTC1-204ENST00000522073 DUOX2Q9NRD8 1548 aa11.25□□□□□ -0.61
TTC1-204ENST00000522073 ADAMTS2O95450 1211 aa11.24□□□□□ -0.61
TTC1-204ENST00000522073 IRS1P35568 1242 aa11.24□□□□□ -0.61
TTC1-204ENST00000522073 PNMA1Q8ND90 353 aa11.24□□□□□ -0.61
TTC1-204ENST00000522073 KDM4CQ9H3R0 1056 aa11.24□□□□□ -0.61
TTC1-204ENST00000522073 PTPRTO14522 1441 aa11.24□□□□□ -0.61
TTC1-204ENST00000522073 ERBINQ96RT1 1412 aa11.24□□□□□ -0.61
TTC1-204ENST00000522073 CLTCQ00610 1675 aaKnown RBP11.24□□□□□ -0.61
TTC1-204ENST00000522073 ITGAEP38570 1179 aa11.23□□□□□ -0.61
TTC1-204ENST00000522073 LYPD4Q6UWN0 246 aa11.23□□□□□ -0.61
TTC1-204ENST00000522073 LYSMD3Q7Z3D4 306 aa11.23□□□□□ -0.61
TTC1-204ENST00000522073 DDRGK1Q96HY6 314 aa11.23□□□□□ -0.61
TTC1-204ENST00000522073 CUEDC1Q9NWM3 386 aaPredicted RBP11.23□□□□□ -0.61
TTC1-204ENST00000522073 DNMT3AQ9Y6K1 912 aaPredicted RBP11.23□□□□□ -0.61
TTC1-204ENST00000522073 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
TTC1-204ENST00000522073 A2ML1A8K2U0 1454 aa11.22□□□□□ -0.61
TTC1-204ENST00000522073 ABCC3O15438 1527 aa11.22□□□□□ -0.61
TTC1-204ENST00000522073 MARSP56192 900 aaKnown RBP11.22□□□□□ -0.61
TTC1-204ENST00000522073 SRSF11Q05519 484 aaKnown RBP11.22□□□□□ -0.61
TTC1-204ENST00000522073 KANK1Q14678 1352 aa11.22□□□□□ -0.61
TTC1-204ENST00000522073 CAMSAP1Q5T5Y3 1602 aa11.22□□□□□ -0.61
TTC1-204ENST00000522073 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
TTC1-204ENST00000522073 FAM135AQ9P2D6 1515 aa11.22□□□□□ -0.61
TTC1-204ENST00000522073 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
TTC1-204ENST00000522073 GAS6Q14393 721 aa11.21□□□□□ -0.61
TTC1-204ENST00000522073 KANK3Q6NY19 840 aa11.21□□□□□ -0.61
TTC1-204ENST00000522073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.2□□□□□ -0.62
TTC1-204ENST00000522073 THEMISQ8N1K5 641 aaPredicted RBP11.2□□□□□ -0.62
TTC1-204ENST00000522073 SCARF2Q96GP6 870 aaPredicted RBP11.2□□□□□ -0.62
TTC1-204ENST00000522073 CEP170BQ9Y4F5 1589 aaPredicted RBP11.2□□□□□ -0.62
TTC1-204ENST00000522073 PLA2R1Q13018 1463 aa11.19□□□□□ -0.62
TTC1-204ENST00000522073 RNF144AP50876 292 aaPredicted RBP11.19□□□□□ -0.62
TTC1-204ENST00000522073 ANKLE2Q86XL3 938 aa11.19□□□□□ -0.62
TTC1-204ENST00000522073 SEPT12Q8IYM1 358 aa11.19□□□□□ -0.62
TTC1-204ENST00000522073 DNMT1P26358 1616 aaKnown RBP11.19□□□□□ -0.62
TTC1-204ENST00000522073 ZNF335Q9H4Z2 1342 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms