RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	RFC4	P35249	363 aa		11.01	□□□□□ -0.65
CTNNA1-231	ENST00000521941	TRAPPC3L	Q5T215	181 aa		11.01	□□□□□ -0.65
CTNNA1-231	ENST00000521941	RC3H1	Q5TC82	1133 aa	Known RBP	11.01	□□□□□ -0.65
CTNNA1-231	ENST00000521941	PRAMEF22	A3QJZ6	481 aa		11	□□□□□ -0.65
CTNNA1-231	ENST00000521941	LMOD3	Q0VAK6	560 aa		11	□□□□□ -0.65
CTNNA1-231	ENST00000521941	TAF7	Q15545	349 aa	Predicted RBP	11	□□□□□ -0.65
CTNNA1-231	ENST00000521941	INTS5	Q6P9B9	1019 aa	Known RBP	11	□□□□□ -0.65
CTNNA1-231	ENST00000521941	VSIG10	Q8N0Z9	540 aa		11	□□□□□ -0.65
CTNNA1-231	ENST00000521941	ARHGEF1	Q92888	912 aa	Known RBP	11	□□□□□ -0.65
CTNNA1-231	ENST00000521941	SRP68	Q9UHB9	627 aa	Known RBP	11	□□□□□ -0.65
CTNNA1-231	ENST00000521941	COL15A1	P39059	1388 aa		11	□□□□□ -0.65
CTNNA1-231	ENST00000521941	STARD3NL	O95772	234 aa		10.99	□□□□□ -0.65
CTNNA1-231	ENST00000521941	ADRA2B	P18089	450 aa		10.99	□□□□□ -0.65
CTNNA1-231	ENST00000521941	PIP4K2A	P48426	406 aa	Predicted RBP	10.99	□□□□□ -0.65
CTNNA1-231	ENST00000521941	LAS1L	Q9Y4W2	734 aa	Known RBP	10.99	□□□□□ -0.65
CTNNA1-231	ENST00000521941	SOS1	Q07889	1333 aa	Predicted RBP	10.99	□□□□□ -0.65
CTNNA1-231	ENST00000521941	APAF1	O14727	1248 aa		10.98	□□□□□ -0.65
CTNNA1-231	ENST00000521941	TSPYL4	Q9UJ04	414 aa		10.98	□□□□□ -0.65
CTNNA1-231	ENST00000521941	A1BG	P04217	495 aa		10.97	□□□□□ -0.65
CTNNA1-231	ENST00000521941	PELP1	Q8IZL8	1130 aa	Known RBP	10.97	□□□□□ -0.65
CTNNA1-231	ENST00000521941	PNISR	Q8TF01	805 aa	Known RBP	10.97	□□□□□ -0.65
CTNNA1-231	ENST00000521941	SYT17	Q9BSW7	474 aa		10.97	□□□□□ -0.65
CTNNA1-231	ENST00000521941	USP16	Q9Y5T5	823 aa		10.97	□□□□□ -0.65
CTNNA1-231	ENST00000521941	USP42	Q9H9J4	1324 aa	Known RBP	10.97	□□□□□ -0.65
CTNNA1-231	ENST00000521941	SCN7A	Q01118	1682 aa		10.97	□□□□□ -0.65
CTNNA1-231	ENST00000521941	ZPR1	O75312	459 aa		10.96	□□□□□ -0.65
CTNNA1-231	ENST00000521941	MMP10	P09238	476 aa		10.96	□□□□□ -0.65
CTNNA1-231	ENST00000521941	SNRPA1	P09661	255 aa	Known RBP	10.96	□□□□□ -0.65
CTNNA1-231	ENST00000521941	GYS1	P13807	737 aa		10.96	□□□□□ -0.65
CTNNA1-231	ENST00000521941	USPL1	Q5W0Q7	1092 aa		10.96	□□□□□ -0.65
CTNNA1-231	ENST00000521941	NPM2	Q86SE8	214 aa	Known RBP	10.96	□□□□□ -0.65
CTNNA1-231	ENST00000521941	NLGN2	Q8NFZ4	835 aa		10.96	□□□□□ -0.65
CTNNA1-231	ENST00000521941	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.96	□□□□□ -0.65
CTNNA1-231	ENST00000521941	TRIM35	Q9UPQ4	493 aa		10.96	□□□□□ -0.65
CTNNA1-231	ENST00000521941	EIF4A1	P60842	406 aa	Known RBP	10.95	□□□□□ -0.66
CTNNA1-231	ENST00000521941	FKBP8	Q14318	412 aa		10.95	□□□□□ -0.66
CTNNA1-231	ENST00000521941	FAM9B	Q8IZU0	186 aa		10.95	□□□□□ -0.66
CTNNA1-231	ENST00000521941	WWC3	Q9ULE0	1092 aa		10.95	□□□□□ -0.66
CTNNA1-231	ENST00000521941	BCOR	Q6W2J9	1755 aa		10.95	□□□□□ -0.66
CTNNA1-231	ENST00000521941	DCAF8L1	A6NGE4	600 aa		10.94	□□□□□ -0.66
CTNNA1-231	ENST00000521941	NLGN1	Q8N2Q7	840 aa		10.94	□□□□□ -0.66
CTNNA1-231	ENST00000521941	TBC1D2B	Q9UPU7	963 aa		10.94	□□□□□ -0.66
CTNNA1-231	ENST00000521941	SALL2	Q9Y467	1007 aa	Predicted RBP	10.94	□□□□□ -0.66
CTNNA1-231	ENST00000521941	PARP3	Q9Y6F1	533 aa		10.94	□□□□□ -0.66
CTNNA1-231	ENST00000521941	IL6ST	P40189	918 aa	Predicted RBP	10.93	□□□□□ -0.66
CTNNA1-231	ENST00000521941	EIF5	P55010	431 aa	Known RBP	10.93	□□□□□ -0.66
CTNNA1-231	ENST00000521941	BICDL1	Q6ZP65	573 aa		10.93	□□□□□ -0.66
CTNNA1-231	ENST00000521941	NGEF	Q8N5V2	710 aa		10.93	□□□□□ -0.66
CTNNA1-231	ENST00000521941	NECTIN2	Q92692	538 aa		10.93	□□□□□ -0.66
CTNNA1-231	ENST00000521941	NARF	Q9UHQ1	456 aa		10.93	□□□□□ -0.66
CTNNA1-231	ENST00000521941	AFDN	P55196	1824 aa	Known RBP	10.93	□□□□□ -0.66
CTNNA1-231	ENST00000521941	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.93	□□□□□ -0.66
CTNNA1-231	ENST00000521941		A0A087WZG4	1122 aa		10.92	□□□□□ -0.66
CTNNA1-231	ENST00000521941	GIGYF1	O75420	1035 aa	Predicted RBP	10.92	□□□□□ -0.66
CTNNA1-231	ENST00000521941	MYL6B	P14649	208 aa		10.92	□□□□□ -0.66
CTNNA1-231	ENST00000521941	EIF2S2	P20042	333 aa	Known RBP	10.92	□□□□□ -0.66
CTNNA1-231	ENST00000521941	KRT24	Q2M2I5	525 aa		10.92	□□□□□ -0.66
CTNNA1-231	ENST00000521941	DZIP3	Q86Y13	1208 aa	Known RBP	10.92	□□□□□ -0.66
CTNNA1-231	ENST00000521941	KIF13B	Q9NQT8	1826 aa		10.91	□□□□□ -0.66
CTNNA1-231	ENST00000521941	DDR1	Q08345	913 aa		10.91	□□□□□ -0.66
CTNNA1-231	ENST00000521941	GPR162	Q16538	588 aa		10.91	□□□□□ -0.66
CTNNA1-231	ENST00000521941	BCL2L12	Q9HB09	334 aa		10.91	□□□□□ -0.66
CTNNA1-231	ENST00000521941	NBPF26	B4DH59	902 aa		10.9	□□□□□ -0.66
CTNNA1-231	ENST00000521941	NFIX	Q14938	502 aa		10.9	□□□□□ -0.66
CTNNA1-231	ENST00000521941	NBPF10	Q6P3W6	841 aa	Known RBP	10.9	□□□□□ -0.66
CTNNA1-231	ENST00000521941	NBPF15	Q8N660	670 aa		10.9	□□□□□ -0.66
CTNNA1-231	ENST00000521941	C10orf71	Q711Q0	1435 aa		10.9	□□□□□ -0.66
CTNNA1-231	ENST00000521941	KIAA1551	Q9HCM1	1747 aa		10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	POLRMT	O00411	1230 aa	Known RBP	10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	CHL1	O00533	1208 aa		10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	CAMTA2	O94983	1202 aa		10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	ANXA1	P04083	346 aa		10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	TBC1D9B	Q66K14	1250 aa		10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	CFAP44	Q96MT7	982 aa		10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	MBIP	Q9NS73	344 aa		10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	BABAM1	Q9NWV8	329 aa		10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	CD2AP	Q9Y5K6	639 aa		10.89	□□□□□ -0.67
CTNNA1-231	ENST00000521941	PXDNL	A1KZ92	1463 aa		10.88	□□□□□ -0.67
CTNNA1-231	ENST00000521941	NPHP1	O15259	732 aa		10.88	□□□□□ -0.67
CTNNA1-231	ENST00000521941	GNAI1	P63096	354 aa		10.88	□□□□□ -0.67
CTNNA1-231	ENST00000521941	CALD1	Q05682	793 aa	Known RBP	10.88	□□□□□ -0.67
CTNNA1-231	ENST00000521941	NRXN2	Q9P2S2	1712 aa		10.88	□□□□□ -0.67
CTNNA1-231	ENST00000521941	NUP98	P52948	1817 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	FAM177B	A6PVY3	158 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	ELL2	O00472	640 aa	Predicted RBP	10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	SERPINB2	P05120	415 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	TM4SF1	P30408	202 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	HDGFL1	Q5TGJ6	251 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	KIF6	Q6ZMV9	814 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	TTLL7	Q6ZT98	887 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	CCDC24	Q8N4L8	307 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	TSR2	Q969E8	191 aa	Known RBP	10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	ZBTB3	Q9H5J0	574 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	IFT57	Q9NWB7	429 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	ZNF652	Q9Y2D9	606 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941	CARMIL3	Q8ND23	1372 aa		10.87	□□□□□ -0.67
CTNNA1-231	ENST00000521941		A0A0G2JLW4	131 aa		10.86	□□□□□ -0.67
CTNNA1-231	ENST00000521941	YBX3	P16989	372 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
CTNNA1-231	ENST00000521941	AIMP1	Q12904	312 aa	Known RBP	10.86	□□□□□ -0.67
CTNNA1-231	ENST00000521941	PROSER3	Q2NL68	480 aa		10.86	□□□□□ -0.67

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