RNA–Protein interactions for RNA: ENST00000521672.5

NPM1-208, Transcript of nucleophosmin 1, humanhuman

TSL 5

Gene NPM1, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-208ENST00000521672 SLC4A9Q96Q91 983 aa10.62□□□□□ -0.71
NPM1-208ENST00000521672 MBIPQ9NS73 344 aa10.62□□□□□ -0.71
NPM1-208ENST00000521672 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
NPM1-208ENST00000521672 RREB1Q92766 1687 aa10.62□□□□□ -0.71
NPM1-208ENST00000521672 KCPQ6ZWJ8 1503 aa10.62□□□□□ -0.71
NPM1-208ENST00000521672 DLG5Q8TDM6 1919 aa10.62□□□□□ -0.71
NPM1-208ENST00000521672 SRCAPQ6ZRS2 3230 aa10.62□□□□□ -0.71
NPM1-208ENST00000521672 RGL2O15211 777 aa10.61□□□□□ -0.71
NPM1-208ENST00000521672 HNRNPUQ00839 825 aaKnown RBP eCLIP10.61□□□□□ -0.715e-6■□□□□ 8.3
NPM1-208ENST00000521672 R3HDM1Q15032 1099 aaKnown RBP10.61□□□□□ -0.71
NPM1-208ENST00000521672 ZNF428Q96B54 188 aa10.61□□□□□ -0.71
NPM1-208ENST00000521672 SIPA1L3O60292 1781 aaPredicted RBP10.61□□□□□ -0.71
NPM1-208ENST00000521672 PAPPAQ13219 1627 aa10.61□□□□□ -0.71
NPM1-208ENST00000521672 ZNF521Q96K83 1311 aa10.6□□□□□ -0.71
NPM1-208ENST00000521672 CICQ96RK0 1608 aaPredicted RBP10.6□□□□□ -0.71
NPM1-208ENST00000521672 KCNQ3O43525 872 aa10.6□□□□□ -0.71
NPM1-208ENST00000521672 ZPR1O75312 459 aa10.6□□□□□ -0.71
NPM1-208ENST00000521672 CT47B1P0C2W7 299 aaPredicted RBP10.6□□□□□ -0.71
NPM1-208ENST00000521672 RFC4P35249 363 aa10.6□□□□□ -0.71
NPM1-208ENST00000521672 C5P01031 1676 aa10.6□□□□□ -0.71
NPM1-208ENST00000521672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.59□□□□□ -0.71
NPM1-208ENST00000521672 KCNQ4P56696 695 aa10.59□□□□□ -0.71
NPM1-208ENST00000521672 ZNF827Q17R98 1081 aa10.59□□□□□ -0.71
NPM1-208ENST00000521672 CCDC30Q5VVM6 783 aa10.59□□□□□ -0.71
NPM1-208ENST00000521672 DUSP27Q5VZP5 1158 aa10.59□□□□□ -0.71
NPM1-208ENST00000521672 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
NPM1-208ENST00000521672 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
NPM1-208ENST00000521672 DBF4Q9UBU7 674 aaPredicted RBP10.59□□□□□ -0.71
NPM1-208ENST00000521672 UBR2Q8IWV8 1755 aa10.59□□□□□ -0.71
NPM1-208ENST00000521672 ZBED9Q6R2W3 1325 aa10.58□□□□□ -0.71
NPM1-208ENST00000521672 POLD1P28340 1107 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 EIF5P55010 431 aaKnown RBP10.58□□□□□ -0.72
NPM1-208ENST00000521672 HDGFL1Q5TGJ6 251 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 NLGN1Q8N2Q7 840 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 STK31Q9BXU1 1019 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 MTFR1LQ9H019 292 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 HYPKQ9NX55 129 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 ZNF652Q9Y2D9 606 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 USP16Q9Y5T5 823 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
NPM1-208ENST00000521672 C4BP0C0L5 1744 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 NUP188Q5SRE5 1749 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 FANCIQ9NVI1 1328 aa10.58□□□□□ -0.72
NPM1-208ENST00000521672 EIF2S2P20042 333 aaKnown RBP10.57□□□□□ -0.72
NPM1-208ENST00000521672 CANXP27824 592 aaKnown RBP10.57□□□□□ -0.72
NPM1-208ENST00000521672 SLFN5Q08AF3 891 aa10.57□□□□□ -0.72
NPM1-208ENST00000521672 TWISTNBQ3B726 338 aaPredicted RBP10.57□□□□□ -0.72
NPM1-208ENST00000521672 KIF6Q6ZMV9 814 aa10.57□□□□□ -0.72
NPM1-208ENST00000521672 SPON1Q9HCB6 807 aa10.57□□□□□ -0.72
NPM1-208ENST00000521672 DDX21Q9NR30 783 aaKnown RBP eCLIP10.57□□□□□ -0.72
NPM1-208ENST00000521672 KDM3BQ7LBC6 1761 aa10.57□□□□□ -0.72
NPM1-208ENST00000521672 PNPLA7Q6ZV29 1317 aa10.57□□□□□ -0.72
NPM1-208ENST00000521672 PSDA5PKW4 1024 aaPredicted RBP10.56□□□□□ -0.72
NPM1-208ENST00000521672 PHF14O94880 888 aa10.56□□□□□ -0.72
NPM1-208ENST00000521672 A1BGP04217 495 aa10.56□□□□□ -0.72
NPM1-208ENST00000521672 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
NPM1-208ENST00000521672 COL23A1Q86Y22 540 aaPredicted RBP10.56□□□□□ -0.72
NPM1-208ENST00000521672 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
NPM1-208ENST00000521672 TSR2Q969E8 191 aaKnown RBP10.56□□□□□ -0.72
NPM1-208ENST00000521672 NARFQ9UHQ1 456 aa10.56□□□□□ -0.72
NPM1-208ENST00000521672 ZBTB1Q9Y2K1 713 aa10.56□□□□□ -0.72
NPM1-208ENST00000521672 COL15A1P39059 1388 aa10.55□□□□□ -0.72
NPM1-208ENST00000521672 ERVV-1B6SEH8 477 aa10.55□□□□□ -0.72
NPM1-208ENST00000521672 DDX58O95786 925 aaKnown RBP10.55□□□□□ -0.72
NPM1-208ENST00000521672 C8orf58Q8NAV2 365 aa10.55□□□□□ -0.72
NPM1-208ENST00000521672 ARXQ96QS3 562 aa10.55□□□□□ -0.72
NPM1-208ENST00000521672 COL5A3P25940 1745 aaPredicted RBP10.54□□□□□ -0.72
NPM1-208ENST00000521672 EXOSC9Q06265 439 aaKnown RBP10.54□□□□□ -0.72
NPM1-208ENST00000521672 C1QBPQ07021 282 aaKnown RBP10.54□□□□□ -0.72
NPM1-208ENST00000521672 HSP90AB3PQ58FF7 597 aa10.54□□□□□ -0.72
NPM1-208ENST00000521672 DZIP3Q86Y13 1208 aaKnown RBP10.54□□□□□ -0.72
NPM1-208ENST00000521672 TRMT2AQ8IZ69 625 aaKnown RBP10.54□□□□□ -0.72
NPM1-208ENST00000521672 ZNF330Q9Y3S2 320 aaPredicted RBP10.54□□□□□ -0.72
NPM1-208ENST00000521672 USP42Q9H9J4 1324 aaKnown RBP10.54□□□□□ -0.72
NPM1-208ENST00000521672 TAF1LQ8IZX4 1826 aa10.54□□□□□ -0.72
NPM1-208ENST00000521672 QSER1Q2KHR3 1735 aa10.53□□□□□ -0.72
NPM1-208ENST00000521672 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
NPM1-208ENST00000521672 PRAMEF22A3QJZ6 481 aa10.53□□□□□ -0.72
NPM1-208ENST00000521672 ELL2O00472 640 aaPredicted RBP10.53□□□□□ -0.72
NPM1-208ENST00000521672 TJP1Q07157 1748 aa10.53□□□□□ -0.72
NPM1-208ENST00000521672 NBPF26B4DH59 902 aa10.52□□□□□ -0.73
NPM1-208ENST00000521672 VAMP4O75379 141 aa10.52□□□□□ -0.73
NPM1-208ENST00000521672 MYL6BP14649 208 aa10.52□□□□□ -0.73
NPM1-208ENST00000521672 ALDH1L2Q3SY69 923 aa10.52□□□□□ -0.73
NPM1-208ENST00000521672 NBPF10Q6P3W6 841 aaKnown RBP10.52□□□□□ -0.73
NPM1-208ENST00000521672 NBPF15Q8N660 670 aa10.52□□□□□ -0.73
NPM1-208ENST00000521672 CHPF2Q9P2E5 772 aa10.52□□□□□ -0.73
NPM1-208ENST00000521672 ZBTB7AO95365 584 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 SLC4A2P04920 1241 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 GYS1P13807 737 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 PDIA6Q15084 440 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 KRT24Q2M2I5 525 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 ANKRD13DQ6ZTN6 518 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 SETDB2Q96T68 719 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
NPM1-208ENST00000521672 PPP1R1BQ9UD71 204 aaPredicted RBP10.51□□□□□ -0.73
NPM1-208ENST00000521672 TBC1D2BQ9UPU7 963 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 PARP3Q9Y6F1 533 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 MAP3K15Q6ZN16 1313 aa10.51□□□□□ -0.73
NPM1-208ENST00000521672 LAMB4A4D0S4 1761 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms