RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
CDH17-205	ENST00000521491	SSH2	Q76I76	1423 aa		7.32	□□□□□ -1.24
CDH17-205	ENST00000521491	CGNL1	Q0VF96	1302 aa		7.31	□□□□□ -1.24
CDH17-205	ENST00000521491	PDE3B	Q13370	1112 aa		7.31	□□□□□ -1.24
CDH17-205	ENST00000521491	TTLL12	Q14166	644 aa	Predicted RBP	7.31	□□□□□ -1.24
CDH17-205	ENST00000521491	FAM163A	Q96GL9	167 aa	Predicted RBP	7.31	□□□□□ -1.24
CDH17-205	ENST00000521491	KDM4C	Q9H3R0	1056 aa		7.31	□□□□□ -1.24
CDH17-205	ENST00000521491	ADGRG1	Q9Y653	693 aa		7.31	□□□□□ -1.24
CDH17-205	ENST00000521491	LMO7	Q8WWI1	1683 aa		7.31	□□□□□ -1.24
CDH17-205	ENST00000521491	NPC1L1	Q9UHC9	1359 aa		7.31	□□□□□ -1.24
CDH17-205	ENST00000521491	LTN1	O94822	1766 aa		7.31	□□□□□ -1.24
CDH17-205	ENST00000521491	PBX2	P40425	430 aa		7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	PTF1A	Q7RTS3	328 aa		7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	METTL3	Q86U44	580 aa	Known RBP	7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	PARP9	Q8IXQ6	854 aa		7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	TCP11L2	Q8N4U5	519 aa		7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	ABTB2	Q8N961	1025 aa		7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	RBM46	Q8TBY0	533 aa	Known RBP	7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	MARVELD3	Q96A59	401 aa		7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	GGNBP2	Q9H3C7	697 aa		7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	NSD2	O96028	1365 aa		7.3	□□□□□ -1.24
CDH17-205	ENST00000521491	TTC21B	Q7Z4L5	1316 aa		7.29	□□□□□ -1.24
CDH17-205	ENST00000521491	TRIM6-TRIM34	B2RNG4	842 aa		7.29	□□□□□ -1.24
CDH17-205	ENST00000521491	ARHGAP33	O14559	1287 aa		7.29	□□□□□ -1.24
CDH17-205	ENST00000521491	YY1	P25490	414 aa		7.29	□□□□□ -1.24
CDH17-205	ENST00000521491	CLCN1	P35523	988 aa		7.29	□□□□□ -1.24
CDH17-205	ENST00000521491	TNNT2	P45379	298 aa	Predicted RBP	7.29	□□□□□ -1.24
CDH17-205	ENST00000521491	RALBP1	Q15311	655 aa		7.29	□□□□□ -1.24
CDH17-205	ENST00000521491	NBPF14	Q5TI25	921 aa		7.29	□□□□□ -1.24
CDH17-205	ENST00000521491	NME9	Q86XW9	330 aa		7.29	□□□□□ -1.24
CDH17-205	ENST00000521491	USP19	O94966	1318 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	MYBBP1A	Q9BQG0	1328 aa	Known RBP	7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	OVOS2	A0A0J9YW53	1432 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	OVOS2	Q6IE36	1432 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	PEAK1	Q9H792	1746 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	PARP4	Q9UKK3	1724 aa	Known RBP	7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	ZBTB7C	A1YPR0	619 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	FAM205C	A6NFA0	338 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	NBPF26	B4DH59	902 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	FYB1	O15117	783 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	GC	P02774	474 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	CCDC184	Q52MB2	194 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	MORC1	Q86VD1	984 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	PACS2	Q86VP3	889 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	PXYLP1	Q8TE99	480 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	CPD	O75976	1380 aa		7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	COL5A2	P05997	1499 aa	Predicted RBP	7.28	□□□□□ -1.24
CDH17-205	ENST00000521491	KCNQ2	O43526	872 aa		7.27	□□□□□ -1.25
CDH17-205	ENST00000521491	FAM161A	Q3B820	660 aa		7.27	□□□□□ -1.25
CDH17-205	ENST00000521491	ZNF687	Q8N1G0	1237 aa		7.27	□□□□□ -1.25
CDH17-205	ENST00000521491	SPON1	Q9HCB6	807 aa		7.27	□□□□□ -1.25
CDH17-205	ENST00000521491	GPCPD1	Q9NPB8	672 aa		7.27	□□□□□ -1.25
CDH17-205	ENST00000521491	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.27	□□□□□ -1.25
CDH17-205	ENST00000521491	TSKS	Q9UJT2	592 aa		7.27	□□□□□ -1.25
CDH17-205	ENST00000521491	SBF2	Q86WG5	1849 aa		7.27	□□□□□ -1.25
CDH17-205	ENST00000521491	TTC21A	Q8NDW8	1320 aa		7.27	□□□□□ -1.25
CDH17-205	ENST00000521491	BRD4	O60885	1362 aa	Predicted RBP	7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	CCER2	I3L3R5	266 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	PPP2R1A	P30153	589 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	PSEN2	P49810	448 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	MDM2	Q00987	491 aa	Predicted RBP	7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	NLRP13	Q86W25	1043 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	COG3	Q96JB2	828 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	PHOX2B	Q99453	314 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	ZBED2	Q9BTP6	218 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	MRS2	Q9HD23	443 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	FAM198A	Q9UFP1	575 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	THRAP3	Q9Y2W1	955 aa	Known RBP	7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	LRRC37A3	O60309	1634 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	SLIT3	O75094	1523 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	NFAT5	O94916	1531 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	CRB1	P82279	1406 aa		7.26	□□□□□ -1.25
CDH17-205	ENST00000521491	CASZ1	Q86V15	1759 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	RGPD5	Q99666	1765 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	USP31	Q70CQ4	1352 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	PROX2	Q3B8N5	592 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	DDRGK1	Q96HY6	314 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	HS3ST6	Q96QI5	342 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	SLC4A5	Q9BY07	1137 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	BCL11A	Q9H165	835 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	AXIN2	Q9Y2T1	843 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	COL18A1	P39060	1754 aa		7.25	□□□□□ -1.25
CDH17-205	ENST00000521491	COL3A1	P02461	1466 aa	Predicted RBP	7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	ZBTB7A	O95365	584 aa		7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	FBLN1	P23142	703 aa		7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	NUDT18	Q6ZVK8	323 aa		7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	MARCH10	Q8NA82	808 aa	Predicted RBP	7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	TATDN2	Q93075	761 aa		7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	EYA1	Q99502	592 aa		7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	TMUB1	Q9BVT8	246 aa		7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	PNMA3	Q9UL41	463 aa		7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	OVOS2	A0A0G2JMS6	1433 aa		7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	SMG6	Q86US8	1419 aa	Known RBP	7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	WNK3	Q9BYP7	1800 aa		7.24	□□□□□ -1.25
CDH17-205	ENST00000521491	RGPD3	A6NKT7	1758 aa	Predicted RBP	7.23	□□□□□ -1.25
CDH17-205	ENST00000521491	RGPD2	P0DJD1	1756 aa		7.23	□□□□□ -1.25

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