RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 SENP2Q9HC62 589 aa8.48□□□□□ -1.05
FAM49B-218ENST00000520887 MED14O60244 1454 aa8.48□□□□□ -1.05
FAM49B-218ENST00000520887 DHX57Q6P158 1386 aaKnown RBP8.48□□□□□ -1.05
FAM49B-218ENST00000520887 LAMC1P11047 1609 aa8.47□□□□□ -1.05
FAM49B-218ENST00000520887 TLL2Q9Y6L7 1015 aa8.47□□□□□ -1.05
FAM49B-218ENST00000520887 PPLO60437 1756 aa8.46□□□□□ -1.05
FAM49B-218ENST00000520887 STRCQ7RTU9 1775 aa8.46□□□□□ -1.05
FAM49B-218ENST00000520887 FAM174AQ8TBP5 190 aa8.46□□□□□ -1.06
FAM49B-218ENST00000520887 FOXJ1Q92949 421 aa8.46□□□□□ -1.06
FAM49B-218ENST00000520887 TRIM47Q96LD4 638 aa8.46□□□□□ -1.06
FAM49B-218ENST00000520887 KDM4CQ9H3R0 1056 aa8.46□□□□□ -1.06
FAM49B-218ENST00000520887 GPBP1L1Q9HC44 474 aaPredicted RBP8.46□□□□□ -1.06
FAM49B-218ENST00000520887 ZFYVE9O95405 1425 aa8.46□□□□□ -1.06
FAM49B-218ENST00000520887 MYOM2P54296 1465 aa8.45□□□□□ -1.06
FAM49B-218ENST00000520887 CPS1P31327 1500 aa8.45□□□□□ -1.06
FAM49B-218ENST00000520887 NEXMIFQ5QGS0 1516 aa8.45□□□□□ -1.06
FAM49B-218ENST00000520887 CAPN5O15484 640 aaPredicted RBP8.45□□□□□ -1.06
FAM49B-218ENST00000520887 SNRPBP14678 240 aaKnown RBP8.45□□□□□ -1.06
FAM49B-218ENST00000520887 NEUROD1Q13562 356 aa8.45□□□□□ -1.06
FAM49B-218ENST00000520887 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
FAM49B-218ENST00000520887 PIK3R4Q99570 1358 aa8.45□□□□□ -1.06
FAM49B-218ENST00000520887 AGERQ15109 404 aa8.44□□□□□ -1.06
FAM49B-218ENST00000520887 SKIV2LQ15477 1246 aaKnown RBP8.44□□□□□ -1.06
FAM49B-218ENST00000520887 ARMC2Q8NEN0 867 aa8.44□□□□□ -1.06
FAM49B-218ENST00000520887 DCAF11Q8TEB1 546 aa8.44□□□□□ -1.06
FAM49B-218ENST00000520887 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
FAM49B-218ENST00000520887 DDRGK1Q96HY6 314 aa8.44□□□□□ -1.06
FAM49B-218ENST00000520887 SPATA31E1Q6ZUB1 1445 aa8.44□□□□□ -1.06
FAM49B-218ENST00000520887 SETBP1Q9Y6X0 1596 aa8.44□□□□□ -1.06
FAM49B-218ENST00000520887 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
FAM49B-218ENST00000520887 C14orf37Q86TY3 774 aa8.43□□□□□ -1.06
FAM49B-218ENST00000520887 BPHLQ86WA6 291 aaPredicted RBP8.43□□□□□ -1.06
FAM49B-218ENST00000520887 FAM117AQ9C073 453 aa8.43□□□□□ -1.06
FAM49B-218ENST00000520887 NKTRP30414 1462 aaKnown RBP8.43□□□□□ -1.06
FAM49B-218ENST00000520887 LTKP29376 864 aa8.42□□□□□ -1.06
FAM49B-218ENST00000520887 NNTQ13423 1086 aa8.42□□□□□ -1.06
FAM49B-218ENST00000520887 ARID5BQ14865 1188 aa8.42□□□□□ -1.06
FAM49B-218ENST00000520887 TMEM132AQ24JP5 1023 aa8.42□□□□□ -1.06
FAM49B-218ENST00000520887 CDK15Q96Q40 435 aa8.42□□□□□ -1.06
FAM49B-218ENST00000520887 SLC26A8Q96RN1 970 aa8.42□□□□□ -1.06
FAM49B-218ENST00000520887 TBX22Q9Y458 520 aa8.42□□□□□ -1.06
FAM49B-218ENST00000520887 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
FAM49B-218ENST00000520887 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
FAM49B-218ENST00000520887 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
FAM49B-218ENST00000520887 TIMELESSQ9UNS1 1208 aa8.41□□□□□ -1.06
FAM49B-218ENST00000520887 IQSEC2Q5JU85 1478 aa8.4□□□□□ -1.06
FAM49B-218ENST00000520887 ADH1CP00326 375 aa8.4□□□□□ -1.06
FAM49B-218ENST00000520887 BMP1P13497 986 aa8.4□□□□□ -1.06
FAM49B-218ENST00000520887 KCNA6P17658 529 aa8.4□□□□□ -1.06
FAM49B-218ENST00000520887 LCE2AQ5TA79 106 aaPredicted RBP8.4□□□□□ -1.06
FAM49B-218ENST00000520887 NBPF14Q5TI25 921 aa8.4□□□□□ -1.06
FAM49B-218ENST00000520887 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.06
FAM49B-218ENST00000520887 PROCA1Q8NCQ7 364 aaPredicted RBP8.4□□□□□ -1.06
FAM49B-218ENST00000520887 PIK3C2GO75747 1445 aa8.39□□□□□ -1.07
FAM49B-218ENST00000520887 EIF3AQ14152 1382 aaKnown RBP8.39□□□□□ -1.07
FAM49B-218ENST00000520887 ZNF335Q9H4Z2 1342 aaPredicted RBP8.39□□□□□ -1.07
FAM49B-218ENST00000520887 WFS1O76024 890 aa8.39□□□□□ -1.07
FAM49B-218ENST00000520887 ALKQ9UM73 1620 aa8.39□□□□□ -1.07
FAM49B-218ENST00000520887 NWD1Q149M9 1564 aa8.39□□□□□ -1.07
FAM49B-218ENST00000520887 MSH6P52701 1360 aa8.38□□□□□ -1.07
FAM49B-218ENST00000520887 WDR4P57081 412 aaKnown RBP8.38□□□□□ -1.07
FAM49B-218ENST00000520887 PROSER2Q86WR7 435 aaPredicted RBP8.38□□□□□ -1.07
FAM49B-218ENST00000520887 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
FAM49B-218ENST00000520887 ADAMTS13Q76LX8 1427 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 KIAA1210Q9ULL0 1709 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 ADGRF5Q8IZF2 1346 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 TOM1O60784 492 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 TIMP2P16035 220 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 GRM5P41594 1212 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 NFX1Q12986 1120 aaKnown RBP8.37□□□□□ -1.07
FAM49B-218ENST00000520887 NR5A1Q13285 461 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 PPP2R2DQ66LE6 453 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 SH3RF1Q7Z6J0 888 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
FAM49B-218ENST00000520887 SIN3AQ96ST3 1273 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 KLF16Q9BXK1 252 aaPredicted RBP8.37□□□□□ -1.07
FAM49B-218ENST00000520887 AMOTL2Q9Y2J4 779 aa8.37□□□□□ -1.07
FAM49B-218ENST00000520887 CHD2O14647 1828 aaKnown RBP8.37□□□□□ -1.07
FAM49B-218ENST00000520887 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
FAM49B-218ENST00000520887 SH3BP5LQ7L8J4 393 aa8.36□□□□□ -1.07
FAM49B-218ENST00000520887 C1QTNF2Q9BXJ5 285 aa8.36□□□□□ -1.07
FAM49B-218ENST00000520887 POGKQ9P215 609 aa8.36□□□□□ -1.07
FAM49B-218ENST00000520887 KNDC1Q76NI1 1749 aa8.36□□□□□ -1.07
FAM49B-218ENST00000520887 NRXN1Q9ULB1 1477 aa8.36□□□□□ -1.07
FAM49B-218ENST00000520887 PTCH1Q13635 1447 aa8.36□□□□□ -1.07
FAM49B-218ENST00000520887 NCOA3Q9Y6Q9 1424 aa8.36□□□□□ -1.07
FAM49B-218ENST00000520887 NRXN3Q9Y4C0 1643 aa8.36□□□□□ -1.07
FAM49B-218ENST00000520887 MAGEB6P1A0A0J9YX57 407 aa8.35□□□□□ -1.07
FAM49B-218ENST00000520887 TERTO14746 1132 aaKnown RBP8.35□□□□□ -1.07
FAM49B-218ENST00000520887 ATF3P18847 181 aa8.35□□□□□ -1.07
FAM49B-218ENST00000520887 SCARF1Q14162 830 aa8.35□□□□□ -1.07
FAM49B-218ENST00000520887 LRRN4Q8WUT4 740 aa8.35□□□□□ -1.07
FAM49B-218ENST00000520887 L3MBTL2Q969R5 705 aa8.35□□□□□ -1.07
FAM49B-218ENST00000520887 ZFP42Q96MM3 310 aa8.35□□□□□ -1.07
FAM49B-218ENST00000520887 C14orf93Q9H972 538 aaKnown RBP8.35□□□□□ -1.07
FAM49B-218ENST00000520887 PRAG1Q86YV5 1406 aa8.35□□□□□ -1.07
FAM49B-218ENST00000520887 LRPPRCP42704 1394 aaKnown RBP8.35□□□□□ -1.07
FAM49B-218ENST00000520887 XRN1Q8IZH2 1706 aaKnown RBP8.34□□□□□ -1.07
FAM49B-218ENST00000520887 ZIC2O95409 532 aaPredicted RBP8.34□□□□□ -1.07
FAM49B-218ENST00000520887 NR3C2P08235 984 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms