RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 AMPD1P23109 780 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 CHRNA4P43681 627 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 LBRQ14739 615 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 GNASQ5JWF2 1037 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 TMEM214Q6NUQ4 689 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 SLCO4C1Q6ZQN7 724 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 PPARGC1BQ86YN6 1023 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 RHBDD1Q8TEB9 315 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 ZMYND15Q9H091 742 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 SEMA6BQ9H3T3 888 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 GGA1Q9UJY5 639 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 PCDHGA11Q9Y5H2 935 aa6.52□□□□□ -1.37
TRAPPC13-212ENST00000520525 PIK3R2O00459 728 aa6.51□□□□□ -1.37
TRAPPC13-212ENST00000520525 RAD21O60216 631 aa6.51□□□□□ -1.37
TRAPPC13-212ENST00000520525 BMP4P12644 408 aa6.51□□□□□ -1.37
TRAPPC13-212ENST00000520525 SKIP12755 728 aa6.51□□□□□ -1.37
TRAPPC13-212ENST00000520525 CTBSQ01459 385 aa6.51□□□□□ -1.37
TRAPPC13-212ENST00000520525 ZNF295-AS1Q8N0V1 137 aa6.51□□□□□ -1.37
TRAPPC13-212ENST00000520525 NFATC2IPQ8NCF5 419 aa6.51□□□□□ -1.37
TRAPPC13-212ENST00000520525 NDFIP2Q9NV92 336 aa6.51□□□□□ -1.37
TRAPPC13-212ENST00000520525 ATXN7L1Q9ULK2 861 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC13-212ENST00000520525 EPXP11678 715 aa6.5□□□□□ -1.37
TRAPPC13-212ENST00000520525 NCOA4Q13772 614 aa6.5□□□□□ -1.37
TRAPPC13-212ENST00000520525 DOC2BQ14184 412 aa6.5□□□□□ -1.37
TRAPPC13-212ENST00000520525 WWC1Q8IX03 1113 aa6.5□□□□□ -1.37
TRAPPC13-212ENST00000520525 CLUAP1Q96AJ1 413 aa6.5□□□□□ -1.37
TRAPPC13-212ENST00000520525 UCN2Q96RP3 112 aa6.5□□□□□ -1.37
TRAPPC13-212ENST00000520525 RUBCNLQ9H714 662 aa6.5□□□□□ -1.37
TRAPPC13-212ENST00000520525 USP17L5A8MUK1 530 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 BNIP3LO60238 219 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 MSX1P28360 303 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 GTF2E1P29083 439 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 DGKGP49619 791 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 SMTNP53814 917 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 EML3Q32P44 896 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 ABHD17AQ96GS6 310 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 SLC4A9Q96Q91 983 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 SERTAD1Q9UHV2 236 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 IQSEC3Q9UPP2 1182 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 USP3Q9Y6I4 520 aa6.49□□□□□ -1.37
TRAPPC13-212ENST00000520525 A6NJR5 290 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 CSB-PGBD3P0DP91 1061 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 ATP4AP20648 1035 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 FGFR3P22607 806 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 PLA2G4AP47712 749 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 GTF2IP78347 998 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 MTFR1Q15390 333 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 ZMYM1Q5SVZ6 1142 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 DEPDC4Q8N2C3 294 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 PGBD3Q8N328 593 aa6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 FNBP4Q8N3X1 1017 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-212ENST00000520525 LZTS3O60299 673 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-212ENST00000520525 EFHC2Q5JST6 749 aa6.47□□□□□ -1.37
TRAPPC13-212ENST00000520525 CRISPLD1Q9H336 500 aa6.47□□□□□ -1.37
TRAPPC13-212ENST00000520525 NOP53Q9NZM5 478 aaKnown RBP6.47□□□□□ -1.37
TRAPPC13-212ENST00000520525 NOD1Q9Y239 953 aa6.47□□□□□ -1.37
TRAPPC13-212ENST00000520525 A6NJY4 79 aa6.46□□□□□ -1.38
TRAPPC13-212ENST00000520525 ARAFP10398 606 aa6.46□□□□□ -1.38
TRAPPC13-212ENST00000520525 HDGFL1Q5TGJ6 251 aa6.46□□□□□ -1.38
TRAPPC13-212ENST00000520525 TBC1D9Q6ZT07 1266 aa6.46□□□□□ -1.38
TRAPPC13-212ENST00000520525 DNAAF2Q9NVR5 837 aaKnown RBP6.46□□□□□ -1.38
TRAPPC13-212ENST00000520525 USP17L3A6NCW0 530 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 USP17L4A6NCW7 530 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 NEURL1BA8MQ27 555 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 CDK2AP1O14519 115 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 EPHA4P54764 986 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 USP17L2Q6R6M4 530 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 USP17L1Q7RTZ2 530 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 PROSER2Q86WR7 435 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 PLEKHM2Q8IWE5 1019 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 NIFKQ9BYG3 293 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 ZNF358Q9NW07 568 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 KIAA1024Q9UPX6 916 aa6.45□□□□□ -1.38
TRAPPC13-212ENST00000520525 ATP9BO43861 1147 aa6.44□□□□□ -1.38
TRAPPC13-212ENST00000520525 GATA4P43694 442 aa6.44□□□□□ -1.38
TRAPPC13-212ENST00000520525 CLDN10P78369 228 aa6.44□□□□□ -1.38
TRAPPC13-212ENST00000520525 FOXD4L6Q3SYB3 417 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-212ENST00000520525 FOXD4L3Q6VB84 417 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-212ENST00000520525 CHSY3Q70JA7 882 aa6.44□□□□□ -1.38
TRAPPC13-212ENST00000520525 KLF15Q9UIH9 416 aa6.44□□□□□ -1.38
TRAPPC13-212ENST00000520525 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
TRAPPC13-212ENST00000520525 ZDHHC1Q8WTX9 485 aa6.43□□□□□ -1.38
TRAPPC13-212ENST00000520525 GLMNQ92990 594 aa6.43□□□□□ -1.38
TRAPPC13-212ENST00000520525 KRTAP4-12Q9BQ66 201 aa6.43□□□□□ -1.38
TRAPPC13-212ENST00000520525 ZCCHC2Q9C0B9 1178 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-212ENST00000520525 SCHIP1Q9P0W5 487 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-212ENST00000520525 HCN2Q9UL51 889 aa6.43□□□□□ -1.38
TRAPPC13-212ENST00000520525 PCDHGC4Q9Y5F7 938 aa6.43□□□□□ -1.38
TRAPPC13-212ENST00000520525 ZBTB7BO15156 539 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-212ENST00000520525 PSME1Q06323 249 aa6.42□□□□□ -1.38
TRAPPC13-212ENST00000520525 RSPO4Q2I0M5 234 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-212ENST00000520525 C1orf216Q8TAB5 229 aa6.42□□□□□ -1.38
TRAPPC13-212ENST00000520525 TRIM11Q96F44 468 aa6.42□□□□□ -1.38
TRAPPC13-212ENST00000520525 BACH1O14867 736 aa6.41□□□□□ -1.38
TRAPPC13-212ENST00000520525 NKAPLQ5M9Q1 402 aa6.41□□□□□ -1.38
TRAPPC13-212ENST00000520525 FIGNL1Q6PIW4 674 aa6.41□□□□□ -1.38
TRAPPC13-212ENST00000520525 TRIM50Q86XT4 487 aa6.41□□□□□ -1.38
TRAPPC13-212ENST00000520525 AIDAQ96BJ3 306 aa6.41□□□□□ -1.38
TRAPPC13-212ENST00000520525 PLVAPQ9BX97 442 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms