RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 RGPD3A6NKT7 1758 aaPredicted RBP18.35■□□□□ 0.53
VPS37A-206ENST00000520140 RGPD4Q7Z3J3 1758 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 COL5A3P25940 1745 aaPredicted RBP18.35■□□□□ 0.53
VPS37A-206ENST00000520140 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
VPS37A-206ENST00000520140 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
VPS37A-206ENST00000520140 BCL2L13Q9BXK5 485 aa18.34■□□□□ 0.53
VPS37A-206ENST00000520140 ZNF330Q9Y3S2 320 aaPredicted RBP18.34■□□□□ 0.53
VPS37A-206ENST00000520140 STARD3NLO95772 234 aa18.34■□□□□ 0.53
VPS37A-206ENST00000520140 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
VPS37A-206ENST00000520140 MYL6BP14649 208 aa18.33■□□□□ 0.52
VPS37A-206ENST00000520140 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
VPS37A-206ENST00000520140 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.52
VPS37A-206ENST00000520140 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
VPS37A-206ENST00000520140 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
VPS37A-206ENST00000520140 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
VPS37A-206ENST00000520140 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
VPS37A-206ENST00000520140 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
VPS37A-206ENST00000520140 HOXB7P09629 217 aa18.31■□□□□ 0.52
VPS37A-206ENST00000520140 RREB1Q92766 1687 aa18.31■□□□□ 0.52
VPS37A-206ENST00000520140 NUP188Q5SRE5 1749 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 NBPF26B4DH59 902 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 NBPF14Q5TI25 921 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 NBPF10Q6P3W6 841 aaKnown RBP18.3■□□□□ 0.52
VPS37A-206ENST00000520140 INTS5Q6P9B9 1019 aaKnown RBP18.3■□□□□ 0.52
VPS37A-206ENST00000520140 NBPF15Q8N660 670 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 CCDC87Q9NVE4 849 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 CICQ96RK0 1608 aaPredicted RBP18.3■□□□□ 0.52
VPS37A-206ENST00000520140 GNPATO15228 680 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 CCDC30Q5VVM6 783 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 AMIGO3Q86WK7 504 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 ARXQ96QS3 562 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 PHF14O94880 888 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 ZNF827Q17R98 1081 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 AK7Q96M32 723 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 ANO8Q9HCE9 1232 aaPredicted RBP18.29■□□□□ 0.52
VPS37A-206ENST00000520140 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
VPS37A-206ENST00000520140 SSH1Q8WYL5 1049 aa18.28■□□□□ 0.52
VPS37A-206ENST00000520140 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
VPS37A-206ENST00000520140 PDIA6Q15084 440 aa18.28■□□□□ 0.52
VPS37A-206ENST00000520140 BCAR3O75815 825 aa18.27■□□□□ 0.52
VPS37A-206ENST00000520140 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
VPS37A-206ENST00000520140 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.52
VPS37A-206ENST00000520140 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.52
VPS37A-206ENST00000520140 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
VPS37A-206ENST00000520140 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
VPS37A-206ENST00000520140 RARSP54136 660 aaKnown RBP18.26■□□□□ 0.51
VPS37A-206ENST00000520140 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
VPS37A-206ENST00000520140 CNTNAP4Q9C0A0 1308 aa18.26■□□□□ 0.51
VPS37A-206ENST00000520140 G2E3Q7L622 706 aa18.25■□□□□ 0.51
VPS37A-206ENST00000520140 DDX21Q9NR30 783 aaKnown RBP eCLIP18.25■□□□□ 0.51
VPS37A-206ENST00000520140 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
VPS37A-206ENST00000520140 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
VPS37A-206ENST00000520140 RCAN3Q9UKA8 241 aa18.25■□□□□ 0.51
VPS37A-206ENST00000520140 RTCBQ9Y3I0 505 aaKnown RBP18.25■□□□□ 0.51
VPS37A-206ENST00000520140 UBR3Q6ZT12 1888 aa18.25■□□□□ 0.51
VPS37A-206ENST00000520140 TUBGCP6Q96RT7 1819 aa18.24■□□□□ 0.51
VPS37A-206ENST00000520140 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
VPS37A-206ENST00000520140 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
VPS37A-206ENST00000520140 SLC15A2Q16348 729 aa18.23■□□□□ 0.51
VPS37A-206ENST00000520140 STK32BQ9NY57 414 aa18.23■□□□□ 0.51
VPS37A-206ENST00000520140 TBC1D2BQ9UPU7 963 aa18.23■□□□□ 0.51
VPS37A-206ENST00000520140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 MSH5O43196 834 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 RPS6KA4O75676 772 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 CENPBP07199 599 aaPredicted RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 IL6STP40189 918 aaPredicted RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 COPS6Q7L5N1 327 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 LRP10Q7Z4F1 713 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 XAGE3Q8WTP9 111 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 EIF5P55010 431 aaKnown RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 TTLL7Q6ZT98 887 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 FRAT1Q92837 279 aaPredicted RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 COL15A1P39059 1388 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 CACNA1FO60840 1977 aa18.21■□□□□ 0.51
VPS37A-206ENST00000520140 ZNF428Q96B54 188 aa18.21■□□□□ 0.51
VPS37A-206ENST00000520140 ERBB4Q15303 1308 aa18.21■□□□□ 0.51
VPS37A-206ENST00000520140 SOCS7O14512 581 aa18.2■□□□□ 0.5
VPS37A-206ENST00000520140 ARHGEF1Q92888 912 aaKnown RBP18.2■□□□□ 0.5
VPS37A-206ENST00000520140 FLIIQ13045 1269 aa18.2■□□□□ 0.5
VPS37A-206ENST00000520140 TRAPPC3LQ5T215 181 aa18.2■□□□□ 0.5
VPS37A-206ENST00000520140 PDGFDQ9GZP0 370 aaPredicted RBP18.2■□□□□ 0.5
VPS37A-206ENST00000520140 ZBTB3Q9H5J0 574 aa18.2■□□□□ 0.5
VPS37A-206ENST00000520140 FKBP5Q13451 457 aaPredicted RBP18.19■□□□□ 0.5
VPS37A-206ENST00000520140 DZIP3Q86Y13 1208 aaKnown RBP18.19■□□□□ 0.5
VPS37A-206ENST00000520140 NOB1Q9ULX3 412 aaKnown RBP18.19■□□□□ 0.5
VPS37A-206ENST00000520140 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
VPS37A-206ENST00000520140 SRP68Q9UHB9 627 aaKnown RBP18.19■□□□□ 0.5
VPS37A-206ENST00000520140 PNPLA7Q6ZV29 1317 aa18.18■□□□□ 0.5
VPS37A-206ENST00000520140 PSDA5PKW4 1024 aaPredicted RBP18.18■□□□□ 0.5
VPS37A-206ENST00000520140 PLIN1O60240 522 aa18.18■□□□□ 0.5
VPS37A-206ENST00000520140 RFC4P35249 363 aa18.18■□□□□ 0.5
VPS37A-206ENST00000520140 R3HDM1Q15032 1099 aaKnown RBP18.18■□□□□ 0.5
VPS37A-206ENST00000520140 COL23A1Q86Y22 540 aaPredicted RBP18.18■□□□□ 0.5
VPS37A-206ENST00000520140 SRCAPQ6ZRS2 3230 aa18.18■□□□□ 0.5
VPS37A-206ENST00000520140 HMGB2P26583 209 aaKnown RBP18.17■□□□□ 0.5
VPS37A-206ENST00000520140 SSFA2P28290 1259 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms