RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 RRP7AQ9Y3A4 280 aaKnown RBP24.13■■□□□ 1.45
SREK1-207ENST00000520058 MSL1Q68DK7 614 aa24.12■■□□□ 1.45
SREK1-207ENST00000520058 INTS5Q6P9B9 1019 aaKnown RBP24.12■■□□□ 1.45
SREK1-207ENST00000520058 BABAM1Q9NWV8 329 aa24.12■■□□□ 1.45
SREK1-207ENST00000520058 ZPR1O75312 459 aa24.11■■□□□ 1.45
SREK1-207ENST00000520058 AMIGO3Q86WK7 504 aa24.11■■□□□ 1.45
SREK1-207ENST00000520058 THUMPD2Q9BTF0 503 aaKnown RBP24.11■■□□□ 1.45
SREK1-207ENST00000520058 LAMB4A4D0S4 1761 aa24.11■■□□□ 1.45
SREK1-207ENST00000520058 A0A087WZG4 1122 aa24.1■■□□□ 1.45
SREK1-207ENST00000520058 KCNQ3O43525 872 aa24.1■■□□□ 1.45
SREK1-207ENST00000520058 SMIM5Q71RC9 77 aa24.1■■□□□ 1.45
SREK1-207ENST00000520058 KLHL34Q8N239 644 aa24.1■■□□□ 1.45
SREK1-207ENST00000520058 TSPYL4Q9UJ04 414 aa24.1■■□□□ 1.45
SREK1-207ENST00000520058 CANXP27824 592 aaKnown RBP24.09■■□□□ 1.45
SREK1-207ENST00000520058 CALD1Q05682 793 aaKnown RBP24.09■■□□□ 1.45
SREK1-207ENST00000520058 MIS18AQ9NYP9 233 aa24.09■■□□□ 1.45
SREK1-207ENST00000520058 ZBTB1Q9Y2K1 713 aa24.09■■□□□ 1.45
SREK1-207ENST00000520058 SOS1Q07889 1333 aaPredicted RBP24.09■■□□□ 1.45
SREK1-207ENST00000520058 APAF1O14727 1248 aa24.08■■□□□ 1.45
SREK1-207ENST00000520058 CCDC184Q52MB2 194 aa24.08■■□□□ 1.45
SREK1-207ENST00000520058 FHDC1Q9C0D6 1143 aaPredicted RBP24.08■■□□□ 1.45
SREK1-207ENST00000520058 COL15A1P39059 1388 aa24.07■■□□□ 1.44
SREK1-207ENST00000520058 SYT17Q9BSW7 474 aa24.06■■□□□ 1.44
SREK1-207ENST00000520058 USP42Q9H9J4 1324 aaKnown RBP24.06■■□□□ 1.44
SREK1-207ENST00000520058 IL6STP40189 918 aaPredicted RBP24.05■■□□□ 1.44
SREK1-207ENST00000520058 ZNF330Q9Y3S2 320 aaPredicted RBP24.05■■□□□ 1.44
SREK1-207ENST00000520058 TRIM35Q9UPQ4 493 aa24.04■■□□□ 1.44
SREK1-207ENST00000520058 LAS1LQ9Y4W2 734 aaKnown RBP24.04■■□□□ 1.44
SREK1-207ENST00000520058 USP16Q9Y5T5 823 aa24.04■■□□□ 1.44
SREK1-207ENST00000520058 GYS1P13807 737 aa24.03■■□□□ 1.44
SREK1-207ENST00000520058 EIF4A1P60842 406 aaKnown RBP24.03■■□□□ 1.44
SREK1-207ENST00000520058 NARFQ9UHQ1 456 aa24.03■■□□□ 1.44
SREK1-207ENST00000520058 PARP3Q9Y6F1 533 aa24.03■■□□□ 1.44
SREK1-207ENST00000520058 MMP10P09238 476 aa24.02■■□□□ 1.44
SREK1-207ENST00000520058 EIF5P55010 431 aaKnown RBP24.02■■□□□ 1.44
SREK1-207ENST00000520058 GIGYF1O75420 1035 aaPredicted RBP24.01■■□□□ 1.43
SREK1-207ENST00000520058 A1BGP04217 495 aa24.01■■□□□ 1.43
SREK1-207ENST00000520058 CD2APQ9Y5K6 639 aa24.01■■□□□ 1.43
SREK1-207ENST00000520058 USPL1Q5W0Q7 1092 aa24■■□□□ 1.43
SREK1-207ENST00000520058 SRP68Q9UHB9 627 aaKnown RBP24■■□□□ 1.43
SREK1-207ENST00000520058 CFAP44Q96MT7 982 aa23.99■■□□□ 1.43
SREK1-207ENST00000520058 PRAMEF22A3QJZ6 481 aa23.98■■□□□ 1.43
SREK1-207ENST00000520058 CHL1O00533 1208 aa23.98■■□□□ 1.43
SREK1-207ENST00000520058 GNAI1P63096 354 aa23.98■■□□□ 1.43
SREK1-207ENST00000520058 FAM9BQ8IZU0 186 aa23.98■■□□□ 1.43
SREK1-207ENST00000520058 SCN7AQ01118 1682 aa23.96■■□□□ 1.43
SREK1-207ENST00000520058 FKBP8Q14318 412 aa23.96■■□□□ 1.43
SREK1-207ENST00000520058 NCBP3Q53F19 620 aaKnown RBP23.96■■□□□ 1.43
SREK1-207ENST00000520058 ERBB4Q15303 1308 aa23.95■■□□□ 1.42
SREK1-207ENST00000520058 CCDC27Q2M243 656 aa23.95■■□□□ 1.42
SREK1-207ENST00000520058 IFT57Q9NWB7 429 aa23.95■■□□□ 1.42
SREK1-207ENST00000520058 KIF13BQ9NQT8 1826 aa23.95■■□□□ 1.42
SREK1-207ENST00000520058 BCORQ6W2J9 1755 aa23.95■■□□□ 1.42
SREK1-207ENST00000520058 DZIP3Q86Y13 1208 aaKnown RBP23.94■■□□□ 1.42
SREK1-207ENST00000520058 TBC1D2BQ9UPU7 963 aa23.94■■□□□ 1.42
SREK1-207ENST00000520058 ZNF652Q9Y2D9 606 aa23.94■■□□□ 1.42
SREK1-207ENST00000520058 NGEFQ8N5V2 710 aa23.93■■□□□ 1.42
SREK1-207ENST00000520058 AFDNP55196 1824 aaKnown RBP23.93■■□□□ 1.42
SREK1-207ENST00000520058 CHMP4AQ9BY43 222 aa23.92■■□□□ 1.42
SREK1-207ENST00000520058 EIF2S2P20042 333 aaKnown RBP23.91■■□□□ 1.42
SREK1-207ENST00000520058 CCER2I3L3R5 266 aa23.9■■□□□ 1.42
SREK1-207ENST00000520058 HOXB7P09629 217 aa23.9■■□□□ 1.42
SREK1-207ENST00000520058 TM4SF1P30408 202 aa23.9■■□□□ 1.42
SREK1-207ENST00000520058 PIP4K2AP48426 406 aaPredicted RBP23.9■■□□□ 1.42
SREK1-207ENST00000520058 GPR162Q16538 588 aa23.9■■□□□ 1.42
SREK1-207ENST00000520058 NBPF26B4DH59 902 aa23.89■■□□□ 1.41
SREK1-207ENST00000520058 RGL2O15211 777 aa23.89■■□□□ 1.41
SREK1-207ENST00000520058 NBPF10Q6P3W6 841 aaKnown RBP23.89■■□□□ 1.41
SREK1-207ENST00000520058 CLEC4GQ6UXB4 293 aa23.89■■□□□ 1.41
SREK1-207ENST00000520058 KIF6Q6ZMV9 814 aa23.89■■□□□ 1.41
SREK1-207ENST00000520058 NBPF15Q8N660 670 aa23.89■■□□□ 1.41
SREK1-207ENST00000520058 MBIPQ9NS73 344 aa23.89■■□□□ 1.41
SREK1-207ENST00000520058 NUP98P52948 1817 aa23.89■■□□□ 1.41
SREK1-207ENST00000520058 CHD4Q14839 1912 aa23.88■■□□□ 1.41
SREK1-207ENST00000520058 TGFB2P61812 414 aa23.88■■□□□ 1.41
SREK1-207ENST00000520058 NFIXQ14938 502 aa23.88■■□□□ 1.41
SREK1-207ENST00000520058 WWC1Q8IX03 1113 aa23.88■■□□□ 1.41
SREK1-207ENST00000520058 PELP1Q8IZL8 1130 aaKnown RBP23.88■■□□□ 1.41
SREK1-207ENST00000520058 NLGN2Q8NFZ4 835 aa23.88■■□□□ 1.41
SREK1-207ENST00000520058 SETDB2Q96T68 719 aa23.88■■□□□ 1.41
SREK1-207ENST00000520058 POLRMTO00411 1230 aaKnown RBP23.87■■□□□ 1.41
SREK1-207ENST00000520058 NPHP1O15259 732 aa23.87■■□□□ 1.41
SREK1-207ENST00000520058 CAMTA2O94983 1202 aa23.87■■□□□ 1.41
SREK1-207ENST00000520058 ZNF853P0CG23 659 aa23.87■■□□□ 1.41
SREK1-207ENST00000520058 MYL6BP14649 208 aa23.87■■□□□ 1.41
SREK1-207ENST00000520058 DIEXFQ68CQ4 756 aaKnown RBP23.87■■□□□ 1.41
SREK1-207ENST00000520058 BICDL1Q6ZP65 573 aa23.87■■□□□ 1.41
SREK1-207ENST00000520058 BCL2L12Q9HB09 334 aa23.87■■□□□ 1.41
SREK1-207ENST00000520058 N4BP2Q86UW6 1770 aaPredicted RBP23.86■■□□□ 1.41
SREK1-207ENST00000520058 CARMIL3Q8ND23 1372 aa23.86■■□□□ 1.41
SREK1-207ENST00000520058 IL16Q14005 1332 aa23.85■■□□□ 1.41
SREK1-207ENST00000520058 C10orf71Q711Q0 1435 aa23.85■■□□□ 1.41
SREK1-207ENST00000520058 NRXN2Q9P2S2 1712 aa23.85■■□□□ 1.41
SREK1-207ENST00000520058 DDR1Q08345 913 aa23.85■■□□□ 1.41
SREK1-207ENST00000520058 SERPINB2P05120 415 aa23.84■■□□□ 1.41
SREK1-207ENST00000520058 HDGFL1Q5TGJ6 251 aa23.84■■□□□ 1.41
SREK1-207ENST00000520058 WDR63Q8IWG1 891 aa23.84■■□□□ 1.41
SREK1-207ENST00000520058 SALL2Q9Y467 1007 aaPredicted RBP23.84■■□□□ 1.41
SREK1-207ENST00000520058 ERVV-1B6SEH8 477 aa23.83■■□□□ 1.41
SREK1-207ENST00000520058 DUSP27Q5VZP5 1158 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms