RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 KCNA1Q09470 495 aa9.87□□□□□ -0.83
NPM1-206ENST00000519955 WDR44Q5JSH3 913 aa9.87□□□□□ -0.83
NPM1-206ENST00000519955 TAS1R3Q7RTX0 852 aa9.87□□□□□ -0.83
NPM1-206ENST00000519955 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
NPM1-206ENST00000519955 CHMP7Q8WUX9 453 aaPredicted RBP9.87□□□□□ -0.83
NPM1-206ENST00000519955 C2orf49Q9BVC5 232 aaPredicted RBP9.87□□□□□ -0.83
NPM1-206ENST00000519955 SERTM1A2A2V5 107 aa9.86□□□□□ -0.83
NPM1-206ENST00000519955 FKBP5Q13451 457 aaPredicted RBP9.86□□□□□ -0.83
NPM1-206ENST00000519955 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.86□□□□□ -0.839e-15■□□□□ 8.8
NPM1-206ENST00000519955 POTEAQ6S8J7 498 aa9.86□□□□□ -0.83
NPM1-206ENST00000519955 PRICKLE2Q7Z3G6 844 aa9.86□□□□□ -0.83
NPM1-206ENST00000519955 COL26A1Q96A83 441 aa9.86□□□□□ -0.83
NPM1-206ENST00000519955 VTI1AQ96AJ9 217 aa9.86□□□□□ -0.83
NPM1-206ENST00000519955 MTMR7Q9Y216 660 aa9.86□□□□□ -0.83
NPM1-206ENST00000519955 FIGNL2A6NMB9 653 aa9.85□□□□□ -0.83
NPM1-206ENST00000519955 MAN1A2O60476 641 aa9.85□□□□□ -0.83
NPM1-206ENST00000519955 PTCD1O75127 700 aaKnown RBP9.85□□□□□ -0.83
NPM1-206ENST00000519955 NOS2P35228 1153 aa9.85□□□□□ -0.83
NPM1-206ENST00000519955 HIRAP54198 1017 aaPredicted RBP9.85□□□□□ -0.83
NPM1-206ENST00000519955 C4orf17Q53FE4 359 aa9.85□□□□□ -0.83
NPM1-206ENST00000519955 NBPF10Q6P3W6 841 aaKnown RBP9.85□□□□□ -0.83
NPM1-206ENST00000519955 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.85□□□□□ -0.83
NPM1-206ENST00000519955 DNMT3LQ9UJW3 386 aa9.85□□□□□ -0.83
NPM1-206ENST00000519955 ARID4AP29374 1257 aaPredicted RBP9.84□□□□□ -0.83
NPM1-206ENST00000519955 POU4F2Q12837 409 aa9.84□□□□□ -0.83
NPM1-206ENST00000519955 AEBP1Q8IUX7 1158 aa9.84□□□□□ -0.83
NPM1-206ENST00000519955 ZDHHC1Q8WTX9 485 aa9.84□□□□□ -0.83
NPM1-206ENST00000519955 L3MBTL2Q969R5 705 aa9.84□□□□□ -0.83
NPM1-206ENST00000519955 TRIM47Q96LD4 638 aa9.84□□□□□ -0.83
NPM1-206ENST00000519955 ZNF232Q9UNY5 417 aa9.84□□□□□ -0.83
NPM1-206ENST00000519955 EML1O00423 815 aa9.83□□□□□ -0.84
NPM1-206ENST00000519955 PLA2G4AP47712 749 aa9.83□□□□□ -0.84
NPM1-206ENST00000519955 TREML4Q6UXN2 200 aa9.83□□□□□ -0.84
NPM1-206ENST00000519955 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
NPM1-206ENST00000519955 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
NPM1-206ENST00000519955 MKNK1Q9BUB5 465 aa9.82□□□□□ -0.84
NPM1-206ENST00000519955 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
NPM1-206ENST00000519955 RHOQP17081 205 aa9.81□□□□□ -0.84
NPM1-206ENST00000519955 PHKA2P46019 1235 aa9.81□□□□□ -0.84
NPM1-206ENST00000519955 TXNDC2Q86VQ3 553 aa9.81□□□□□ -0.84
NPM1-206ENST00000519955 ZDHHC3Q9NYG2 299 aa9.81□□□□□ -0.84
NPM1-206ENST00000519955 GNEQ9Y223 722 aaKnown RBP9.81□□□□□ -0.84
NPM1-206ENST00000519955 PARP3Q9Y6F1 533 aa9.81□□□□□ -0.84
NPM1-206ENST00000519955 TIMMDC1Q9NPL8 285 aa9.8□□□□□ -0.84
NPM1-206ENST00000519955 A0A1B0GTH6 734 aa9.79□□□□□ -0.84
NPM1-206ENST00000519955 ZBTB7CA1YPR0 619 aa9.79□□□□□ -0.84
NPM1-206ENST00000519955 SH3PXD2AQ5TCZ1 1133 aa9.79□□□□□ -0.84
NPM1-206ENST00000519955 C1orf53Q5VUE5 145 aa9.79□□□□□ -0.84
NPM1-206ENST00000519955 AIDAQ96BJ3 306 aa9.79□□□□□ -0.84
NPM1-206ENST00000519955 TATP17735 454 aaPredicted RBP9.78□□□□□ -0.84
NPM1-206ENST00000519955 ALDH16A1Q8IZ83 802 aa9.78□□□□□ -0.84
NPM1-206ENST00000519955 HCN4Q9Y3Q4 1203 aa9.78□□□□□ -0.84
NPM1-206ENST00000519955 DYRK1BQ9Y463 629 aa9.78□□□□□ -0.84
NPM1-206ENST00000519955 SOBPA7XYQ1 873 aa9.77□□□□□ -0.85
NPM1-206ENST00000519955 SCNN1AP37088 669 aa9.77□□□□□ -0.85
NPM1-206ENST00000519955 TXLNAP40222 546 aa9.77□□□□□ -0.85
NPM1-206ENST00000519955 MYO19Q96H55 970 aa9.77□□□□□ -0.85
NPM1-206ENST00000519955 PHACTR1Q9C0D0 580 aa9.77□□□□□ -0.85
NPM1-206ENST00000519955 GPC6Q9Y625 555 aaPredicted RBP9.77□□□□□ -0.85
NPM1-206ENST00000519955 C11orf95C9JLR9 678 aaPredicted RBP9.76□□□□□ -0.85
NPM1-206ENST00000519955 RTN1Q16799 776 aa9.76□□□□□ -0.85
NPM1-206ENST00000519955 C16orf46Q6P387 395 aa9.76□□□□□ -0.85
NPM1-206ENST00000519955 CAPN12Q6ZSI9 719 aa9.76□□□□□ -0.85
NPM1-206ENST00000519955 NGLY1Q96IV0 654 aa9.76□□□□□ -0.85
NPM1-206ENST00000519955 SEPT3Q9UH03 358 aa9.76□□□□□ -0.85
NPM1-206ENST00000519955 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
NPM1-206ENST00000519955 SNRPBP14678 240 aaKnown RBP9.75□□□□□ -0.85
NPM1-206ENST00000519955 PTSQ03393 145 aa9.75□□□□□ -0.85
NPM1-206ENST00000519955 NAA30Q147X3 362 aaPredicted RBP9.75□□□□□ -0.85
NPM1-206ENST00000519955 QTRT2Q9H974 415 aaKnown RBP9.75□□□□□ -0.85
NPM1-206ENST00000519955 EGFL7Q9UHF1 273 aa9.75□□□□□ -0.85
NPM1-206ENST00000519955 F11P03951 625 aa9.74□□□□□ -0.85
NPM1-206ENST00000519955 MSX1P28360 303 aa9.74□□□□□ -0.85
NPM1-206ENST00000519955 RHPN1Q8TCX5 695 aa9.74□□□□□ -0.85
NPM1-206ENST00000519955 GTF3C2Q8WUA4 911 aaPredicted RBP9.74□□□□□ -0.85
NPM1-206ENST00000519955 SENP3-EIF4A1A0A087X0R7 540 aa9.73□□□□□ -0.85
NPM1-206ENST00000519955 SLC35F4A4IF30 521 aa9.73□□□□□ -0.85
NPM1-206ENST00000519955 ATP4AP20648 1035 aa9.73□□□□□ -0.85
NPM1-206ENST00000519955 SERPINB4P48594 390 aa9.73□□□□□ -0.85
NPM1-206ENST00000519955 HIF1AQ16665 826 aa9.73□□□□□ -0.85
NPM1-206ENST00000519955 COX20Q5RI15 118 aa9.73□□□□□ -0.85
NPM1-206ENST00000519955 HELQQ8TDG4 1101 aa9.73□□□□□ -0.85
NPM1-206ENST00000519955 ABL1P00519 1130 aa9.72□□□□□ -0.85
NPM1-206ENST00000519955 SF3B2Q13435 895 aaKnown RBP9.72□□□□□ -0.85
NPM1-206ENST00000519955 BICDL1Q6ZP65 573 aa9.72□□□□□ -0.85
NPM1-206ENST00000519955 GAS2L1Q99501 681 aaPredicted RBP9.72□□□□□ -0.85
NPM1-206ENST00000519955 SAP130Q9H0E3 1048 aa9.72□□□□□ -0.85
NPM1-206ENST00000519955 TRIM26Q12899 539 aaPredicted RBP9.71□□□□□ -0.86
NPM1-206ENST00000519955 C11orf91Q3C1V1 193 aa9.71□□□□□ -0.86
NPM1-206ENST00000519955 ARSJQ5FYB0 599 aaPredicted RBP9.71□□□□□ -0.86
NPM1-206ENST00000519955 PGBD3Q8N328 593 aa9.71□□□□□ -0.86
NPM1-206ENST00000519955 C7orf43Q8WVR3 580 aa9.71□□□□□ -0.86
NPM1-206ENST00000519955 CRISPLD1Q9H336 500 aa9.71□□□□□ -0.86
NPM1-206ENST00000519955 DNMT3AQ9Y6K1 912 aaPredicted RBP9.71□□□□□ -0.86
NPM1-206ENST00000519955 LBRQ14739 615 aaKnown RBP9.7□□□□□ -0.86
NPM1-206ENST00000519955 CCDC155Q8N6L0 562 aa9.7□□□□□ -0.86
NPM1-206ENST00000519955 GPAMQ9HCL2 828 aa9.7□□□□□ -0.86
NPM1-206ENST00000519955 ANKIB1Q9P2G1 1089 aa9.7□□□□□ -0.86
NPM1-206ENST00000519955 LRFN2Q9ULH4 789 aa9.7□□□□□ -0.86
NPM1-206ENST00000519955 BRD2P25440 801 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms