RNA–Protein interactions for RNA: ENST00000519885.5

TRAPPC2-208, Transcript of trafficking protein particle complex 2, humanhuman

TSL 3 BASIC

Gene TRAPPC2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-208ENST00000519885 FAM196BA6NMK8 535 aa6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 USP17L5A8MUK1 530 aa6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 APLP1P51693 650 aa6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 MCCD1P59942 119 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 NEUROD1Q13562 356 aa6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 TMEM164Q5U3C3 297 aa6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 BRICD5Q6PL45 260 aa6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 SCUBE3Q8IX30 993 aa6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 USB1Q9BQ65 265 aaKnown RBP6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 NOVA2Q9UNW9 492 aaKnown RBP6.84□□□□□ -1.31
TRAPPC2-208ENST00000519885 ZFYVE9O95405 1425 aa6.84□□□□□ -1.32
TRAPPC2-208ENST00000519885 SKIP12755 728 aa6.83□□□□□ -1.32
TRAPPC2-208ENST00000519885 ERCC3P19447 782 aa6.83□□□□□ -1.32
TRAPPC2-208ENST00000519885 ZNF787Q6DD87 383 aa6.83□□□□□ -1.32
TRAPPC2-208ENST00000519885 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.83□□□□□ -1.32
TRAPPC2-208ENST00000519885 ZMIZ1Q9ULJ6 1067 aa6.83□□□□□ -1.32
TRAPPC2-208ENST00000519885 SALL2Q9Y467 1007 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC2-208ENST00000519885 GPSM3Q9Y4H4 160 aa6.83□□□□□ -1.32
TRAPPC2-208ENST00000519885 SETBP1Q9Y6X0 1596 aa6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 PLA2R1Q13018 1463 aa6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 LZTS3O60299 673 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 ARID4AP29374 1257 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 TXNDC2Q86VQ3 553 aa6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 STK32AQ8WU08 396 aa6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 ZNF516Q92618 1163 aa6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 PRAG1Q86YV5 1406 aa6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 ZMYM3Q14202 1370 aa6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 TNRQ92752 1358 aa6.82□□□□□ -1.32
TRAPPC2-208ENST00000519885 ATP5J2-PTCD1G3V325 749 aa6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 PIK3CDO00329 1044 aa6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 LCE2BO14633 110 aa6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 PTPRNQ16849 979 aa6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 LARP1Q6PKG0 1096 aaKnown RBP6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 ARMC2Q8NEN0 867 aa6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 GPKOWQ92917 476 aaPredicted RBP eCLIP6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 THAP11Q96EK4 314 aa6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 PCDHB3Q9Y5E6 796 aa6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 SYNMO15061 1565 aa6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 ROCK2O75116 1388 aaKnown RBP6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 GPRASP1Q5JY77 1395 aa6.81□□□□□ -1.32
TRAPPC2-208ENST00000519885 NRXN1Q9ULB1 1477 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L15C9J2P7 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L10C9JJH3 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L13C9JLJ4 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L12C9JPN9 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L11C9JVI0 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L21D6R901 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L18D6R9N7 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L22D6RA61 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L17D6RBQ6 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L19D6RCP7 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L20D6RJB6 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 NR1I2O75469 434 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 FMNL1O95466 1100 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 F12P00748 615 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 USP17L24Q0WX57 530 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 SLFNL1Q499Z3 407 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 L3MBTL2Q969R5 705 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 MAP10Q9P2G4 905 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 IFT172Q9UG01 1749 aa6.8□□□□□ -1.32
TRAPPC2-208ENST00000519885 MADDQ8WXG6 1647 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 DIP2AQ14689 1571 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 JUNDP17535 347 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 COPS2P61201 443 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 PTK2Q05397 1052 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 FAM200AQ8TCP9 573 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 CLP1Q92989 425 aaKnown RBP6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 SIN3AQ96ST3 1273 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 CDCA7Q9BWT1 371 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 MKRN1Q9UHC7 482 aaKnown RBP6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 ZNF142P52746 1687 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 ADAMTSL3P82987 1691 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 TMEM131LA2VDJ0 1609 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 TRPM1Q7Z4N2 1603 aa6.79□□□□□ -1.32
TRAPPC2-208ENST00000519885 PIK3C2GO75747 1445 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 PPLO60437 1756 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 NEXMIFQ5QGS0 1516 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 RBM47A0AV96 593 aaKnown RBP6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 ZPR1O75312 459 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 SSFA2P28290 1259 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 CTHP32929 405 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 FAM174AQ8TBP5 190 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 DCAF11Q8TEB1 546 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 SBNO2Q9Y2G9 1366 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 A2ML1A8K2U0 1454 aa6.78□□□□□ -1.32
TRAPPC2-208ENST00000519885 C3P01024 1663 aa6.77□□□□□ -1.32
TRAPPC2-208ENST00000519885 MYO3AQ8NEV4 1616 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 SIGLEC1Q9BZZ2 1709 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 RASA1P20936 1047 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 PTK7Q13308 1070 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 MAP7D1Q3KQU3 841 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 CRTC2Q53ET0 693 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 ZNF326Q5BKZ1 582 aaKnown RBP6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 NBPF14Q5TI25 921 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 PHLDB3Q6NSJ2 640 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 PDXDC2PQ6P474 469 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 TRIM50Q86XT4 487 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 RNF135Q8IUD6 432 aa6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 FAM160A2Q8N612 972 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC2-208ENST00000519885 NKX2-3Q8TAU0 364 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms