RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 TSGA10IPQ3SY00 556 aa7.32□□□□□ -1.24
CSMD3-209ENST00000519485 SLFNL1Q499Z3 407 aa7.32□□□□□ -1.24
CSMD3-209ENST00000519485 CHSY3Q70JA7 882 aa7.32□□□□□ -1.24
CSMD3-209ENST00000519485 NIFKQ9BYG3 293 aaKnown RBP7.32□□□□□ -1.24
CSMD3-209ENST00000519485 ATXN7O15265 892 aaPredicted RBP7.31□□□□□ -1.24
CSMD3-209ENST00000519485 CHRNA4P43681 627 aa7.31□□□□□ -1.24
CSMD3-209ENST00000519485 PLA2G4AP47712 749 aa7.31□□□□□ -1.24
CSMD3-209ENST00000519485 TNP2Q05952 138 aa7.31□□□□□ -1.24
CSMD3-209ENST00000519485 ZDHHC3Q9NYG2 299 aa7.31□□□□□ -1.24
CSMD3-209ENST00000519485 KLF15Q9UIH9 416 aa7.31□□□□□ -1.24
CSMD3-209ENST00000519485 HCN2Q9UL51 889 aa7.31□□□□□ -1.24
CSMD3-209ENST00000519485 STAU1O95793 577 aaKnown RBP7.3□□□□□ -1.24
CSMD3-209ENST00000519485 FAM157BP0CG42 384 aa7.3□□□□□ -1.24
CSMD3-209ENST00000519485 MAPTP10636 758 aaKnown RBP7.3□□□□□ -1.24
CSMD3-209ENST00000519485 ITGB7P26010 798 aa7.3□□□□□ -1.24
CSMD3-209ENST00000519485 SMTNP53814 917 aa7.3□□□□□ -1.24
CSMD3-209ENST00000519485 GDF10P55107 478 aa7.3□□□□□ -1.24
CSMD3-209ENST00000519485 MAP7D1Q3KQU3 841 aa7.3□□□□□ -1.24
CSMD3-209ENST00000519485 FCHSD1Q86WN1 690 aa7.3□□□□□ -1.24
CSMD3-209ENST00000519485 SLC4A9Q96Q91 983 aa7.3□□□□□ -1.24
CSMD3-209ENST00000519485 PRM3Q9NNZ6 103 aa7.3□□□□□ -1.24
CSMD3-209ENST00000519485 IRF5Q13568 498 aa7.29□□□□□ -1.24
CSMD3-209ENST00000519485 MTFR1Q15390 333 aa7.29□□□□□ -1.24
CSMD3-209ENST00000519485 SAMD5Q5TGI4 173 aa7.29□□□□□ -1.24
CSMD3-209ENST00000519485 ZNF468Q5VIY5 522 aaPredicted RBP7.29□□□□□ -1.24
CSMD3-209ENST00000519485 TBC1D2BQ9UPU7 963 aa7.29□□□□□ -1.24
CSMD3-209ENST00000519485 A0A1W2PNR3 127 aa7.28□□□□□ -1.24
CSMD3-209ENST00000519485 CDK2AP1O14519 115 aa7.28□□□□□ -1.24
CSMD3-209ENST00000519485 LAMC2Q13753 1193 aa7.28□□□□□ -1.24
CSMD3-209ENST00000519485 NBPF1Q3BBV0 1214 aa7.28□□□□□ -1.24
CSMD3-209ENST00000519485 IQSEC3Q9UPP2 1182 aaPredicted RBP7.28□□□□□ -1.24
CSMD3-209ENST00000519485 SPATA31C1P0DKV0 1188 aa7.27□□□□□ -1.25
CSMD3-209ENST00000519485 OXLD1Q5BKU9 147 aa7.27□□□□□ -1.25
CSMD3-209ENST00000519485 TRIM11Q96F44 468 aa7.27□□□□□ -1.25
CSMD3-209ENST00000519485 MDFIQ99750 246 aa7.27□□□□□ -1.25
CSMD3-209ENST00000519485 EFSO43281 561 aa7.26□□□□□ -1.25
CSMD3-209ENST00000519485 TATP17735 454 aaPredicted RBP7.26□□□□□ -1.25
CSMD3-209ENST00000519485 BRPF1P55201 1214 aaPredicted RBP7.26□□□□□ -1.25
CSMD3-209ENST00000519485 DCDC2BA2VCK2 349 aa7.25□□□□□ -1.25
CSMD3-209ENST00000519485 CD33P20138 364 aa7.25□□□□□ -1.25
CSMD3-209ENST00000519485 AIDAQ96BJ3 306 aa7.25□□□□□ -1.25
CSMD3-209ENST00000519485 PSMG3-AS1Q96PY0 264 aa7.25□□□□□ -1.25
CSMD3-209ENST00000519485 ZIC5Q96T25 663 aa7.25□□□□□ -1.25
CSMD3-209ENST00000519485 ELOA3CA0A087WX78 387 aaPredicted RBP7.24□□□□□ -1.25
CSMD3-209ENST00000519485 A6NJY4 79 aa7.24□□□□□ -1.25
CSMD3-209ENST00000519485 ELOA3DA6NLF2 546 aaPredicted RBP7.24□□□□□ -1.25
CSMD3-209ENST00000519485 TMEM229AB2RXF0 380 aa7.24□□□□□ -1.25
CSMD3-209ENST00000519485 KHNYNO15037 678 aaKnown RBP7.24□□□□□ -1.25
CSMD3-209ENST00000519485 ELOA3BQ3SY89 546 aa7.24□□□□□ -1.25
CSMD3-209ENST00000519485 ARSJQ5FYB0 599 aaPredicted RBP7.24□□□□□ -1.25
CSMD3-209ENST00000519485 PLPP7Q8NBV4 271 aa7.24□□□□□ -1.25
CSMD3-209ENST00000519485 ELOA3Q8NG57 546 aa7.24□□□□□ -1.25
CSMD3-209ENST00000519485 PLVAPQ9BX97 442 aa7.24□□□□□ -1.25
CSMD3-209ENST00000519485 SOX11P35716 441 aa7.23□□□□□ -1.25
CSMD3-209ENST00000519485 GATA4P43694 442 aa7.23□□□□□ -1.25
CSMD3-209ENST00000519485 SEMA6BQ9H3T3 888 aa7.23□□□□□ -1.25
CSMD3-209ENST00000519485 MARK1Q9P0L2 795 aa7.23□□□□□ -1.25
CSMD3-209ENST00000519485 SPDYE3A6NKU9 549 aa7.22□□□□□ -1.25
CSMD3-209ENST00000519485 DOC2BQ14184 412 aa7.22□□□□□ -1.25
CSMD3-209ENST00000519485 WASHC4Q2M389 1173 aa7.22□□□□□ -1.25
CSMD3-209ENST00000519485 PRDM6Q9NQX0 595 aa7.22□□□□□ -1.25
CSMD3-209ENST00000519485 PRR12Q9ULL5 1215 aa7.22□□□□□ -1.25
CSMD3-209ENST00000519485 GPC6Q9Y625 555 aaPredicted RBP7.22□□□□□ -1.25
CSMD3-209ENST00000519485 ADARB2-AS1A8MUL3 147 aa7.21□□□□□ -1.26
CSMD3-209ENST00000519485 PCBP4P57723 403 aaKnown RBP7.21□□□□□ -1.26
CSMD3-209ENST00000519485 NKAPLQ5M9Q1 402 aa7.21□□□□□ -1.26
CSMD3-209ENST00000519485 PCDHGA11Q9Y5H2 935 aa7.21□□□□□ -1.26
CSMD3-209ENST00000519485 USP3Q9Y6I4 520 aa7.21□□□□□ -1.26
CSMD3-209ENST00000519485 SIN3BO75182 1162 aa7.2□□□□□ -1.26
CSMD3-209ENST00000519485 VAC14Q08AM6 782 aa7.2□□□□□ -1.26
CSMD3-209ENST00000519485 RSPO4Q2I0M5 234 aaPredicted RBP7.2□□□□□ -1.26
CSMD3-209ENST00000519485 KRTAP9-2Q9BYQ4 174 aa7.2□□□□□ -1.26
CSMD3-209ENST00000519485 STRN4Q9NRL3 753 aa7.2□□□□□ -1.26
CSMD3-209ENST00000519485 CABP1Q9NZU7 370 aa7.2□□□□□ -1.26
CSMD3-209ENST00000519485 GJA3Q9Y6H8 435 aa7.2□□□□□ -1.26
CSMD3-209ENST00000519485 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
CSMD3-209ENST00000519485 BACH1O14867 736 aa7.19□□□□□ -1.26
CSMD3-209ENST00000519485 LZTS3O60299 673 aaPredicted RBP7.19□□□□□ -1.26
CSMD3-209ENST00000519485 ALAS2P22557 587 aa7.19□□□□□ -1.26
CSMD3-209ENST00000519485 TEAD4Q15561 434 aa7.19□□□□□ -1.26
CSMD3-209ENST00000519485 ZMYM1Q5SVZ6 1142 aa7.19□□□□□ -1.26
CSMD3-209ENST00000519485 TNFRSF25Q93038 417 aa7.19□□□□□ -1.26
CSMD3-209ENST00000519485 SCHIP1Q9P0W5 487 aaPredicted RBP7.19□□□□□ -1.26
CSMD3-209ENST00000519485 SERTAD1Q9UHV2 236 aa7.19□□□□□ -1.26
CSMD3-209ENST00000519485 EML1O00423 815 aa7.18□□□□□ -1.26
CSMD3-209ENST00000519485 COL9A3Q14050 684 aaPredicted RBP7.18□□□□□ -1.26
CSMD3-209ENST00000519485 PRRT3Q5FWE3 981 aa7.18□□□□□ -1.26
CSMD3-209ENST00000519485 SYT9Q86SS6 491 aa7.18□□□□□ -1.26
CSMD3-209ENST00000519485 C7orf43Q8WVR3 580 aa7.18□□□□□ -1.26
CSMD3-209ENST00000519485 SEMA3FQ13275 785 aa7.17□□□□□ -1.26
CSMD3-209ENST00000519485 EPHA4P54764 986 aa7.16□□□□□ -1.26
CSMD3-209ENST00000519485 BICDL1Q6ZP65 573 aa7.16□□□□□ -1.26
CSMD3-209ENST00000519485 NFATC2IPQ8NCF5 419 aa7.16□□□□□ -1.26
CSMD3-209ENST00000519485 ZDHHC1Q8WTX9 485 aa7.16□□□□□ -1.26
CSMD3-209ENST00000519485 NACC1Q96RE7 527 aa7.16□□□□□ -1.26
CSMD3-209ENST00000519485 APBA3O96018 575 aa7.15□□□□□ -1.26
CSMD3-209ENST00000519485 TXLNAP40222 546 aa7.15□□□□□ -1.26
CSMD3-209ENST00000519485 L3MBTL2Q969R5 705 aa7.15□□□□□ -1.26
CSMD3-209ENST00000519485 GDPD2Q9HCC8 539 aa7.15□□□□□ -1.26
CSMD3-209ENST00000519485 TPSG1Q9NRR2 321 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms