RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
CTNNA1-211ENST00000518910 ZBTB1Q9Y2K1 713 aa16■□□□□ 0.15
CTNNA1-211ENST00000518910 USP16Q9Y5T5 823 aa16■□□□□ 0.15
CTNNA1-211ENST00000518910 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
CTNNA1-211ENST00000518910 EIF2S2P20042 333 aaKnown RBP15.99■□□□□ 0.15
CTNNA1-211ENST00000518910 RTCBQ9Y3I0 505 aaKnown RBP15.99■□□□□ 0.15
CTNNA1-211ENST00000518910 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
CTNNA1-211ENST00000518910 INTS5Q6P9B9 1019 aaKnown RBP15.98■□□□□ 0.15
CTNNA1-211ENST00000518910 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
CTNNA1-211ENST00000518910 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
CTNNA1-211ENST00000518910 STARD3NLO95772 234 aa15.97■□□□□ 0.15
CTNNA1-211ENST00000518910 SNRPA1P09661 255 aaKnown RBP15.97■□□□□ 0.15
CTNNA1-211ENST00000518910 WWC1Q8IX03 1113 aa15.97■□□□□ 0.15
CTNNA1-211ENST00000518910 MBIPQ9NS73 344 aa15.97■□□□□ 0.15
CTNNA1-211ENST00000518910 PPP1R1BQ9UD71 204 aaPredicted RBP15.96■□□□□ 0.15
CTNNA1-211ENST00000518910 RPS6KA4O75676 772 aa15.95■□□□□ 0.14
CTNNA1-211ENST00000518910 ANXA1P04083 346 aa15.95■□□□□ 0.14
CTNNA1-211ENST00000518910 MYL6BP14649 208 aa15.95■□□□□ 0.14
CTNNA1-211ENST00000518910 RFC4P35249 363 aa15.95■□□□□ 0.14
CTNNA1-211ENST00000518910 TRAPPC3LQ5T215 181 aa15.95■□□□□ 0.14
CTNNA1-211ENST00000518910 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
CTNNA1-211ENST00000518910 SPON1Q9HCB6 807 aa15.95■□□□□ 0.14
CTNNA1-211ENST00000518910 LRP5O75197 1615 aa15.94■□□□□ 0.14
CTNNA1-211ENST00000518910 CHL1O00533 1208 aa15.94■□□□□ 0.14
CTNNA1-211ENST00000518910 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
CTNNA1-211ENST00000518910 VSIG10Q8N0Z9 540 aa15.94■□□□□ 0.14
CTNNA1-211ENST00000518910 COL15A1P39059 1388 aa15.94■□□□□ 0.14
CTNNA1-211ENST00000518910 GIGYF1O75420 1035 aaPredicted RBP15.93■□□□□ 0.14
CTNNA1-211ENST00000518910 SSFA2P28290 1259 aa15.93■□□□□ 0.14
CTNNA1-211ENST00000518910 GNAI1P63096 354 aa15.93■□□□□ 0.14
CTNNA1-211ENST00000518910 CALD1Q05682 793 aaKnown RBP15.93■□□□□ 0.14
CTNNA1-211ENST00000518910 RC3H1Q5TC82 1133 aaKnown RBP15.93■□□□□ 0.14
CTNNA1-211ENST00000518910 CFAP44Q96MT7 982 aa15.93■□□□□ 0.14
CTNNA1-211ENST00000518910 TBC1D2BQ9UPU7 963 aa15.93■□□□□ 0.14
CTNNA1-211ENST00000518910 SOS1Q07889 1333 aaPredicted RBP15.93■□□□□ 0.14
CTNNA1-211ENST00000518910 BCORQ6W2J9 1755 aa15.92■□□□□ 0.14
CTNNA1-211ENST00000518910 NUP98P52948 1817 aa15.92■□□□□ 0.14
CTNNA1-211ENST00000518910 NPM2Q86SE8 214 aaKnown RBP15.92■□□□□ 0.14
CTNNA1-211ENST00000518910 MTFR1LQ9H019 292 aa15.92■□□□□ 0.14
CTNNA1-211ENST00000518910 SPINK5Q9NQ38 1064 aaPredicted RBP15.92■□□□□ 0.14
CTNNA1-211ENST00000518910 IFT57Q9NWB7 429 aa15.92■□□□□ 0.14
CTNNA1-211ENST00000518910 SCN7AQ01118 1682 aa15.92■□□□□ 0.14
CTNNA1-211ENST00000518910 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
CTNNA1-211ENST00000518910 DUSP27Q5VZP5 1158 aa15.91■□□□□ 0.14
CTNNA1-211ENST00000518910 USPL1Q5W0Q7 1092 aa15.91■□□□□ 0.14
CTNNA1-211ENST00000518910 BICDL1Q6ZP65 573 aa15.91■□□□□ 0.14
CTNNA1-211ENST00000518910 TEX13AQ9BXU3 409 aaPredicted RBP15.91■□□□□ 0.14
CTNNA1-211ENST00000518910 AFDNP55196 1824 aaKnown RBP15.91■□□□□ 0.14
CTNNA1-211ENST00000518910 NBPF26B4DH59 902 aa15.9■□□□□ 0.14
CTNNA1-211ENST00000518910 ZPR1O75312 459 aa15.9■□□□□ 0.14
CTNNA1-211ENST00000518910 PROSER3Q2NL68 480 aa15.9■□□□□ 0.14
CTNNA1-211ENST00000518910 NBPF10Q6P3W6 841 aaKnown RBP15.9■□□□□ 0.14
CTNNA1-211ENST00000518910 NBPF15Q8N660 670 aa15.9■□□□□ 0.14
CTNNA1-211ENST00000518910 TSPYL6Q8N831 410 aa15.9■□□□□ 0.14
CTNNA1-211ENST00000518910 C8orf58Q8NAV2 365 aa15.9■□□□□ 0.14
CTNNA1-211ENST00000518910 FLAD1Q8NFF5 587 aa15.9■□□□□ 0.14
CTNNA1-211ENST00000518910 ZNF428Q96B54 188 aa15.9■□□□□ 0.14
CTNNA1-211ENST00000518910 SRCAPQ6ZRS2 3230 aa15.89■□□□□ 0.13
CTNNA1-211ENST00000518910 ZNF853P0CG23 659 aa15.89■□□□□ 0.13
CTNNA1-211ENST00000518910 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
CTNNA1-211ENST00000518910 CCDC27Q2M243 656 aa15.89■□□□□ 0.13
CTNNA1-211ENST00000518910 WWC3Q9ULE0 1092 aa15.89■□□□□ 0.13
CTNNA1-211ENST00000518910 FANCIQ9NVI1 1328 aa15.89■□□□□ 0.13
CTNNA1-211ENST00000518910 COL24A1Q17RW2 1714 aa15.88■□□□□ 0.13
CTNNA1-211ENST00000518910 POLD1P28340 1107 aa15.88■□□□□ 0.13
CTNNA1-211ENST00000518910 PTGER2P43116 358 aa15.88■□□□□ 0.13
CTNNA1-211ENST00000518910 FKBP8Q14318 412 aa15.88■□□□□ 0.13
CTNNA1-211ENST00000518910 HDGFL1Q5TGJ6 251 aa15.88■□□□□ 0.13
CTNNA1-211ENST00000518910 DZIP3Q86Y13 1208 aaKnown RBP15.88■□□□□ 0.13
CTNNA1-211ENST00000518910 CDCA7LQ96GN5 454 aa15.88■□□□□ 0.13
CTNNA1-211ENST00000518910 USP42Q9H9J4 1324 aaKnown RBP15.88■□□□□ 0.13
CTNNA1-211ENST00000518910 N4BP2Q86UW6 1770 aaPredicted RBP15.87■□□□□ 0.13
CTNNA1-211ENST00000518910 FAM177BA6PVY3 158 aa15.87■□□□□ 0.13
CTNNA1-211ENST00000518910 MMP10P09238 476 aa15.87■□□□□ 0.13
CTNNA1-211ENST00000518910 GYS1P13807 737 aa15.87■□□□□ 0.13
CTNNA1-211ENST00000518910 HMGB2P26583 209 aaKnown RBP15.87■□□□□ 0.13
CTNNA1-211ENST00000518910 EIF5P55010 431 aaKnown RBP15.87■□□□□ 0.13
CTNNA1-211ENST00000518910 CHPF2Q9P2E5 772 aa15.87■□□□□ 0.13
CTNNA1-211ENST00000518910 CACNA1SQ13698 1873 aa15.86■□□□□ 0.13
CTNNA1-211ENST00000518910 ADRA2BP18089 450 aa15.86■□□□□ 0.13
CTNNA1-211ENST00000518910 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
CTNNA1-211ENST00000518910 TTLL7Q6ZT98 887 aa15.86■□□□□ 0.13
CTNNA1-211ENST00000518910 ZBTB3Q9H5J0 574 aa15.86■□□□□ 0.13
CTNNA1-211ENST00000518910 BABAM1Q9NWV8 329 aa15.86■□□□□ 0.13
CTNNA1-211ENST00000518910 IL6STP40189 918 aaPredicted RBP15.85■□□□□ 0.13
CTNNA1-211ENST00000518910 WDR63Q8IWG1 891 aa15.85■□□□□ 0.13
CTNNA1-211ENST00000518910 CCDC24Q8N4L8 307 aa15.85■□□□□ 0.13
CTNNA1-211ENST00000518910 SLC16A10Q8TF71 515 aa15.85■□□□□ 0.13
CTNNA1-211ENST00000518910 YTHDC1Q96MU7 727 aaKnown RBP15.85■□□□□ 0.13
CTNNA1-211ENST00000518910 ARFGEF2Q9Y6D5 1785 aa15.85■□□□□ 0.13
CTNNA1-211ENST00000518910 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
CTNNA1-211ENST00000518910 ANKRD36CQ5JPF3 1778 aa15.84■□□□□ 0.13
CTNNA1-211ENST00000518910 A0A087WZG4 1122 aa15.83■□□□□ 0.12
CTNNA1-211ENST00000518910 TWISTNBQ3B726 338 aaPredicted RBP15.83■□□□□ 0.12
CTNNA1-211ENST00000518910 KIF6Q6ZMV9 814 aa15.83■□□□□ 0.12
CTNNA1-211ENST00000518910 XAGE3Q8WTP9 111 aa15.83■□□□□ 0.12
CTNNA1-211ENST00000518910 FHDC1Q9C0D6 1143 aaPredicted RBP15.83■□□□□ 0.12
CTNNA1-211ENST00000518910 BCL2L12Q9HB09 334 aa15.83■□□□□ 0.12
CTNNA1-211ENST00000518910 NARFQ9UHQ1 456 aa15.83■□□□□ 0.12
CTNNA1-211ENST00000518910 IL16Q14005 1332 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms