RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 CCDC184Q52MB2 194 aa24.58■■□□□ 1.53
FAM49B-208ENST00000518344 NLGN1Q8N2Q7 840 aa24.58■■□□□ 1.53
FAM49B-208ENST00000518344 SRP68Q9UHB9 627 aaKnown RBP24.58■■□□□ 1.53
FAM49B-208ENST00000518344 CICQ96RK0 1608 aaPredicted RBP24.57■■□□□ 1.52
FAM49B-208ENST00000518344 PNISRQ8TF01 805 aaKnown RBP24.57■■□□□ 1.52
FAM49B-208ENST00000518344 SOS1Q07889 1333 aaPredicted RBP24.57■■□□□ 1.52
FAM49B-208ENST00000518344 UBR2Q8IWV8 1755 aa24.57■■□□□ 1.52
FAM49B-208ENST00000518344 COL24A1Q17RW2 1714 aa24.56■■□□□ 1.52
FAM49B-208ENST00000518344 GYS1P13807 737 aa24.56■■□□□ 1.52
FAM49B-208ENST00000518344 LMOD3Q0VAK6 560 aa24.56■■□□□ 1.52
FAM49B-208ENST00000518344 MYH14Q7Z406 1995 aaKnown RBP24.56■■□□□ 1.52
FAM49B-208ENST00000518344 MMP10P09238 476 aa24.55■■□□□ 1.52
FAM49B-208ENST00000518344 SNRPA1P09661 255 aaKnown RBP24.55■■□□□ 1.52
FAM49B-208ENST00000518344 USP16Q9Y5T5 823 aa24.55■■□□□ 1.52
FAM49B-208ENST00000518344 PRAMEF22A3QJZ6 481 aa24.54■■□□□ 1.52
FAM49B-208ENST00000518344 ZPR1O75312 459 aa24.54■■□□□ 1.52
FAM49B-208ENST00000518344 A1BGP04217 495 aa24.54■■□□□ 1.52
FAM49B-208ENST00000518344 ZNF330Q9Y3S2 320 aaPredicted RBP24.54■■□□□ 1.52
FAM49B-208ENST00000518344 USP42Q9H9J4 1324 aaKnown RBP24.53■■□□□ 1.52
FAM49B-208ENST00000518344 DLG5Q8TDM6 1919 aa24.53■■□□□ 1.52
FAM49B-208ENST00000518344 NLGN2Q8NFZ4 835 aa24.52■■□□□ 1.52
FAM49B-208ENST00000518344 COL15A1P39059 1388 aa24.52■■□□□ 1.52
FAM49B-208ENST00000518344 FKBP8Q14318 412 aa24.51■■□□□ 1.51
FAM49B-208ENST00000518344 USPL1Q5W0Q7 1092 aa24.51■■□□□ 1.51
FAM49B-208ENST00000518344 MRS2Q9HD23 443 aa24.51■■□□□ 1.51
FAM49B-208ENST00000518344 TSPYL4Q9UJ04 414 aa24.51■■□□□ 1.51
FAM49B-208ENST00000518344 EIF5P55010 431 aaKnown RBP24.5■■□□□ 1.51
FAM49B-208ENST00000518344 NPM2Q86SE8 214 aaKnown RBP24.5■■□□□ 1.51
FAM49B-208ENST00000518344 NARFQ9UHQ1 456 aa24.5■■□□□ 1.51
FAM49B-208ENST00000518344 CD2APQ9Y5K6 639 aa24.5■■□□□ 1.51
FAM49B-208ENST00000518344 PARP3Q9Y6F1 533 aa24.5■■□□□ 1.51
FAM49B-208ENST00000518344 APAF1O14727 1248 aa24.49■■□□□ 1.51
FAM49B-208ENST00000518344 TRIM35Q9UPQ4 493 aa24.49■■□□□ 1.51
FAM49B-208ENST00000518344 A0A087WZG4 1122 aa24.48■■□□□ 1.51
FAM49B-208ENST00000518344 IL6STP40189 918 aaPredicted RBP24.48■■□□□ 1.51
FAM49B-208ENST00000518344 PIP4K2AP48426 406 aaPredicted RBP24.48■■□□□ 1.51
FAM49B-208ENST00000518344 EIF4A1P60842 406 aaKnown RBP24.48■■□□□ 1.51
FAM49B-208ENST00000518344 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
FAM49B-208ENST00000518344 LAS1LQ9Y4W2 734 aaKnown RBP24.47■■□□□ 1.51
FAM49B-208ENST00000518344 GPR162Q16538 588 aa24.46■■□□□ 1.51
FAM49B-208ENST00000518344 C4AP0C0L4 1744 aa24.46■■□□□ 1.51
FAM49B-208ENST00000518344 GIGYF1O75420 1035 aaPredicted RBP24.45■■□□□ 1.5
FAM49B-208ENST00000518344 TBC1D2BQ9UPU7 963 aa24.45■■□□□ 1.5
FAM49B-208ENST00000518344 BCL2L12Q9HB09 334 aa24.44■■□□□ 1.5
FAM49B-208ENST00000518344 BABAM1Q9NWV8 329 aa24.44■■□□□ 1.5
FAM49B-208ENST00000518344 TM4SF1P30408 202 aa24.42■■□□□ 1.5
FAM49B-208ENST00000518344 DDR1Q08345 913 aa24.42■■□□□ 1.5
FAM49B-208ENST00000518344 SENP3-EIF4A1A0A087X0R7 540 aa24.41■■□□□ 1.5
FAM49B-208ENST00000518344 NBPF26B4DH59 902 aa24.4■■□□□ 1.5
FAM49B-208ENST00000518344 NFIXQ14938 502 aa24.4■■□□□ 1.5
FAM49B-208ENST00000518344 NBPF10Q6P3W6 841 aaKnown RBP24.4■■□□□ 1.5
FAM49B-208ENST00000518344 BICDL1Q6ZP65 573 aa24.4■■□□□ 1.5
FAM49B-208ENST00000518344 DZIP3Q86Y13 1208 aaKnown RBP24.4■■□□□ 1.5
FAM49B-208ENST00000518344 NBPF15Q8N660 670 aa24.4■■□□□ 1.5
FAM49B-208ENST00000518344 KDM3BQ7LBC6 1761 aa24.39■■□□□ 1.5
FAM49B-208ENST00000518344 POLRMTO00411 1230 aaKnown RBP24.39■■□□□ 1.49
FAM49B-208ENST00000518344 CHL1O00533 1208 aa24.39■■□□□ 1.49
FAM49B-208ENST00000518344 NGEFQ8N5V2 710 aa24.38■■□□□ 1.49
FAM49B-208ENST00000518344 WWC3Q9ULE0 1092 aa24.38■■□□□ 1.49
FAM49B-208ENST00000518344 CAMTA2O94983 1202 aa24.36■■□□□ 1.49
FAM49B-208ENST00000518344 EIF2S2P20042 333 aaKnown RBP24.36■■□□□ 1.49
FAM49B-208ENST00000518344 TBC1D9BQ66K14 1250 aa24.36■■□□□ 1.49
FAM49B-208ENST00000518344 MYL6BP14649 208 aa24.35■■□□□ 1.49
FAM49B-208ENST00000518344 TGFB2P61812 414 aa24.35■■□□□ 1.49
FAM49B-208ENST00000518344 CFAP44Q96MT7 982 aa24.35■■□□□ 1.49
FAM49B-208ENST00000518344 A0A0G2JLW4 131 aa24.34■■□□□ 1.49
FAM49B-208ENST00000518344 SERPINB2P05120 415 aa24.34■■□□□ 1.49
FAM49B-208ENST00000518344 YBX3P16989 372 aaKnown RBP eCLIP24.34■■□□□ 1.49
FAM49B-208ENST00000518344 CALD1Q05682 793 aaKnown RBP24.34■■□□□ 1.49
FAM49B-208ENST00000518344 FAM9BQ8IZU0 186 aa24.34■■□□□ 1.49
FAM49B-208ENST00000518344 C10orf71Q711Q0 1435 aa24.34■■□□□ 1.49
FAM49B-208ENST00000518344 KRT24Q2M2I5 525 aa24.33■■□□□ 1.49
FAM49B-208ENST00000518344 DPEP1P16444 411 aa24.32■■□□□ 1.48
FAM49B-208ENST00000518344 NECTIN2Q92692 538 aa24.32■■□□□ 1.48
FAM49B-208ENST00000518344 SETDB2Q96T68 719 aa24.32■■□□□ 1.48
FAM49B-208ENST00000518344 YY1P25490 414 aa24.31■■□□□ 1.48
FAM49B-208ENST00000518344 GNAI1P63096 354 aa24.31■■□□□ 1.48
FAM49B-208ENST00000518344 MBIPQ9NS73 344 aa24.31■■□□□ 1.48
FAM49B-208ENST00000518344 ZNF652Q9Y2D9 606 aa24.31■■□□□ 1.48
FAM49B-208ENST00000518344 GRIN3BO60391 1043 aa24.3■■□□□ 1.48
FAM49B-208ENST00000518344 IFT57Q9NWB7 429 aa24.3■■□□□ 1.48
FAM49B-208ENST00000518344 ZNF853P0CG23 659 aa24.29■■□□□ 1.48
FAM49B-208ENST00000518344 CLEC4GQ6UXB4 293 aa24.29■■□□□ 1.48
FAM49B-208ENST00000518344 SALL2Q9Y467 1007 aaPredicted RBP24.29■■□□□ 1.48
FAM49B-208ENST00000518344 PXDNLA1KZ92 1463 aa24.29■■□□□ 1.48
FAM49B-208ENST00000518344 ERBB4Q15303 1308 aa24.29■■□□□ 1.48
FAM49B-208ENST00000518344 KIF6Q6ZMV9 814 aa24.28■■□□□ 1.48
FAM49B-208ENST00000518344 TTLL7Q6ZT98 887 aa24.28■■□□□ 1.48
FAM49B-208ENST00000518344 LAMB4A4D0S4 1761 aa24.28■■□□□ 1.48
FAM49B-208ENST00000518344 NPHP1O15259 732 aa24.27■■□□□ 1.48
FAM49B-208ENST00000518344 ANXA1P04083 346 aa24.27■■□□□ 1.48
FAM49B-208ENST00000518344 HLFQ16534 295 aa24.27■■□□□ 1.48
FAM49B-208ENST00000518344 CARMIL3Q8ND23 1372 aa24.27■■□□□ 1.48
FAM49B-208ENST00000518344 CHRNA5P30532 468 aa24.26■■□□□ 1.47
FAM49B-208ENST00000518344 CCDC27Q2M243 656 aa24.26■■□□□ 1.47
FAM49B-208ENST00000518344 WWC1Q8IX03 1113 aa24.26■■□□□ 1.47
FAM49B-208ENST00000518344 CCDC24Q8N4L8 307 aa24.26■■□□□ 1.47
FAM49B-208ENST00000518344 SCN7AQ01118 1682 aa24.25■■□□□ 1.47
FAM49B-208ENST00000518344 PDIA6Q15084 440 aa24.25■■□□□ 1.47
FAM49B-208ENST00000518344 PROSER3Q2NL68 480 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms