RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 SOX12O15370 315 aa7.18□□□□□ -1.26
PVT1-205ENST00000517790 REPIN1Q9BWE0 567 aaKnown RBP7.18□□□□□ -1.26
PVT1-205ENST00000517790 CDCA7Q9BWT1 371 aaPredicted RBP7.18□□□□□ -1.26
PVT1-205ENST00000517790 CARD10Q9BWT7 1032 aa7.18□□□□□ -1.26
PVT1-205ENST00000517790 TFCP2L1Q9NZI6 479 aa7.18□□□□□ -1.26
PVT1-205ENST00000517790 CCDC61Q9Y6R9 512 aa7.18□□□□□ -1.26
PVT1-205ENST00000517790 BRD4O60885 1362 aaPredicted RBP7.18□□□□□ -1.26
PVT1-205ENST00000517790 WDR90Q96KV7 1748 aa7.18□□□□□ -1.26
PVT1-205ENST00000517790 TNS2Q63HR2 1409 aa7.18□□□□□ -1.26
PVT1-205ENST00000517790 SLIT3O75094 1523 aa7.17□□□□□ -1.26
PVT1-205ENST00000517790 SLC34A2O95436 690 aa7.17□□□□□ -1.26
PVT1-205ENST00000517790 ZNF16P17020 682 aaPredicted RBP7.17□□□□□ -1.26
PVT1-205ENST00000517790 PDIA6Q15084 440 aa7.17□□□□□ -1.26
PVT1-205ENST00000517790 PKNOX2Q96KN3 472 aa7.17□□□□□ -1.26
PVT1-205ENST00000517790 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.17□□□□□ -1.26
PVT1-205ENST00000517790 POM121CA8CG34 1229 aa7.16□□□□□ -1.26
PVT1-205ENST00000517790 TMED8Q6PL24 325 aaPredicted RBP7.16□□□□□ -1.26
PVT1-205ENST00000517790 DNAJC14Q6Y2X3 702 aaPredicted RBP7.16□□□□□ -1.26
PVT1-205ENST00000517790 GDPD2Q9HCC8 539 aa7.16□□□□□ -1.26
PVT1-205ENST00000517790 CPSF1Q10570 1443 aaKnown RBP7.16□□□□□ -1.26
PVT1-205ENST00000517790 TRPM1Q7Z4N2 1603 aa7.16□□□□□ -1.26
PVT1-205ENST00000517790 PIK3C2AO00443 1686 aa7.16□□□□□ -1.26
PVT1-205ENST00000517790 HIC1Q14526 733 aa7.15□□□□□ -1.26
PVT1-205ENST00000517790 NOL8Q76FK4 1167 aaKnown RBP7.15□□□□□ -1.26
PVT1-205ENST00000517790 ARHGEF25Q86VW2 580 aa7.15□□□□□ -1.26
PVT1-205ENST00000517790 COL23A1Q86Y22 540 aaPredicted RBP7.15□□□□□ -1.26
PVT1-205ENST00000517790 KLRG1Q96E93 195 aa7.15□□□□□ -1.26
PVT1-205ENST00000517790 TMUB1Q9BVT8 246 aa7.15□□□□□ -1.26
PVT1-205ENST00000517790 PPIP5K1Q6PFW1 1433 aa7.15□□□□□ -1.27
PVT1-205ENST00000517790 ABCC6O95255 1503 aa7.15□□□□□ -1.27
PVT1-205ENST00000517790 PCNTO95613 3336 aa7.14□□□□□ -1.27
PVT1-205ENST00000517790 ABCB7O75027 752 aa7.14□□□□□ -1.27
PVT1-205ENST00000517790 TOMM70O94826 608 aa7.14□□□□□ -1.27
PVT1-205ENST00000517790 JMYQ8N9B5 988 aa7.14□□□□□ -1.27
PVT1-205ENST00000517790 NMRK2Q9NPI5 230 aa7.14□□□□□ -1.27
PVT1-205ENST00000517790 TMEM88BA6NKF7 163 aa7.13□□□□□ -1.27
PVT1-205ENST00000517790 RFX1P22670 979 aa7.13□□□□□ -1.27
PVT1-205ENST00000517790 FECHP22830 423 aa7.13□□□□□ -1.27
PVT1-205ENST00000517790 SLC27A3Q5K4L6 730 aa7.13□□□□□ -1.27
PVT1-205ENST00000517790 DCAF11Q8TEB1 546 aa7.13□□□□□ -1.27
PVT1-205ENST00000517790 PRDM16Q9HAZ2 1276 aa7.13□□□□□ -1.27
PVT1-205ENST00000517790 CABP2Q9NPB3 220 aa7.13□□□□□ -1.27
PVT1-205ENST00000517790 CD2APQ9Y5K6 639 aa7.13□□□□□ -1.27
PVT1-205ENST00000517790 LY75O60449 1722 aa7.13□□□□□ -1.27
PVT1-205ENST00000517790 CCDC7Q96M83 1385 aa7.12□□□□□ -1.27
PVT1-205ENST00000517790 IGSF1Q8N6C5 1336 aa7.12□□□□□ -1.27
PVT1-205ENST00000517790 LOC102724159A0A0B4J2E5 919 aa7.12□□□□□ -1.27
PVT1-205ENST00000517790 MARCH6O60337 910 aa7.12□□□□□ -1.27
PVT1-205ENST00000517790 PWP2Q15269 919 aaKnown RBP7.12□□□□□ -1.27
PVT1-205ENST00000517790 SF3A1Q15459 793 aaKnown RBP7.12□□□□□ -1.27
PVT1-205ENST00000517790 TMEM259Q4ZIN3 620 aa7.12□□□□□ -1.27
PVT1-205ENST00000517790 DDX54Q8TDD1 881 aaKnown RBP7.12□□□□□ -1.27
PVT1-205ENST00000517790 NLRP2Q9NX02 1062 aa7.12□□□□□ -1.27
PVT1-205ENST00000517790 CABP1Q9NZU7 370 aa7.12□□□□□ -1.27
PVT1-205ENST00000517790 RIPOR2Q9Y4F9 1068 aa7.12□□□□□ -1.27
PVT1-205ENST00000517790 DPYSL4O14531 572 aa7.11□□□□□ -1.27
PVT1-205ENST00000517790 FCHSD2O94868 740 aa7.11□□□□□ -1.27
PVT1-205ENST00000517790 VAMP1P23763 118 aa7.11□□□□□ -1.27
PVT1-205ENST00000517790 RFC5P40937 340 aa7.11□□□□□ -1.27
PVT1-205ENST00000517790 PRIM1P49642 420 aaKnown RBP7.11□□□□□ -1.27
PVT1-205ENST00000517790 PSEN1P49768 467 aa7.11□□□□□ -1.27
PVT1-205ENST00000517790 SMIM5Q71RC9 77 aa7.11□□□□□ -1.27
PVT1-205ENST00000517790 SYTL4Q96C24 671 aaPredicted RBP7.11□□□□□ -1.27
PVT1-205ENST00000517790 CREBZFQ9NS37 354 aa7.11□□□□□ -1.27
PVT1-205ENST00000517790 POLR3EQ9NVU0 708 aa7.11□□□□□ -1.27
PVT1-205ENST00000517790 NFAT5O94916 1531 aa7.11□□□□□ -1.27
PVT1-205ENST00000517790 DOT1LQ8TEK3 1739 aa7.1□□□□□ -1.27
PVT1-205ENST00000517790 NSD2O96028 1365 aa7.1□□□□□ -1.27
PVT1-205ENST00000517790 IL2RBP14784 551 aa7.1□□□□□ -1.27
PVT1-205ENST00000517790 B4GALNT3Q6L9W6 998 aa7.1□□□□□ -1.27
PVT1-205ENST00000517790 GIMAP6Q6P9H5 292 aa7.1□□□□□ -1.27
PVT1-205ENST00000517790 AMIGO3Q86WK7 504 aa7.1□□□□□ -1.27
PVT1-205ENST00000517790 EFCAB3Q8N7B9 438 aa7.1□□□□□ -1.27
PVT1-205ENST00000517790 MTMR14Q8NCE2 650 aa7.1□□□□□ -1.27
PVT1-205ENST00000517790 BCL2L13Q9BXK5 485 aa7.1□□□□□ -1.27
PVT1-205ENST00000517790 CCNL1Q9UK58 526 aaPredicted RBP7.1□□□□□ -1.27
PVT1-205ENST00000517790 QRICH2Q9H0J4 1663 aa7.09□□□□□ -1.27
PVT1-205ENST00000517790 ERBB3P21860 1342 aa7.09□□□□□ -1.27
PVT1-205ENST00000517790 ATG7O95352 703 aa7.09□□□□□ -1.27
PVT1-205ENST00000517790 HSPA1AP0DMV8 641 aaKnown RBP7.09□□□□□ -1.27
PVT1-205ENST00000517790 HSPA1BP0DMV9 641 aaKnown RBP7.09□□□□□ -1.27
PVT1-205ENST00000517790 ABL2P42684 1182 aa7.09□□□□□ -1.27
PVT1-205ENST00000517790 CICQ96RK0 1608 aaPredicted RBP7.09□□□□□ -1.28
PVT1-205ENST00000517790 N4BP2Q86UW6 1770 aaPredicted RBP7.08□□□□□ -1.28
PVT1-205ENST00000517790 TTC21BQ7Z4L5 1316 aa7.08□□□□□ -1.28
PVT1-205ENST00000517790 CLCN1P35523 988 aa7.08□□□□□ -1.28
PVT1-205ENST00000517790 NAALADL2Q58DX5 795 aa7.08□□□□□ -1.28
PVT1-205ENST00000517790 NOM1Q5C9Z4 860 aaKnown RBP7.08□□□□□ -1.28
PVT1-205ENST00000517790 HDGFL1Q5TGJ6 251 aa7.08□□□□□ -1.28
PVT1-205ENST00000517790 RBM46Q8TBY0 533 aaKnown RBP7.08□□□□□ -1.28
PVT1-205ENST00000517790 CCER1Q8TC90 406 aaPredicted RBP7.08□□□□□ -1.28
PVT1-205ENST00000517790 PRM3Q9NNZ6 103 aa7.08□□□□□ -1.28
PVT1-205ENST00000517790 EMILIN3Q9NT22 766 aa7.08□□□□□ -1.28
PVT1-205ENST00000517790 C5P01031 1676 aa7.08□□□□□ -1.28
PVT1-205ENST00000517790 USP54Q70EL1 1684 aa7.08□□□□□ -1.28
PVT1-205ENST00000517790 LTN1O94822 1766 aa7.08□□□□□ -1.28
PVT1-205ENST00000517790 TOGARAM1Q9Y4F4 1720 aa7.07□□□□□ -1.28
PVT1-205ENST00000517790 TAF1LQ8IZX4 1826 aa7.07□□□□□ -1.28
PVT1-205ENST00000517790 SSTR3P32745 418 aaPredicted RBP7.07□□□□□ -1.28
PVT1-205ENST00000517790 NBPF1Q3BBV0 1214 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms