RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 STAG2Q8N3U4 1231 aa9□□□□□ -0.97
CTNNA1-202ENST00000517533 ZNF395Q9H8N7 513 aaPredicted RBP9□□□□□ -0.97
CTNNA1-202ENST00000517533 EML1O00423 815 aa8.99□□□□□ -0.97
CTNNA1-202ENST00000517533 RELBQ01201 579 aa8.99□□□□□ -0.97
CTNNA1-202ENST00000517533 PARP3Q9Y6F1 533 aa8.99□□□□□ -0.97
CTNNA1-202ENST00000517533 V9GY48 417 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-202ENST00000517533 ZBTB39O15060 712 aa8.98□□□□□ -0.97
CTNNA1-202ENST00000517533 PSMA6P60900 246 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-202ENST00000517533 C16orf46Q6P387 395 aa8.98□□□□□ -0.97
CTNNA1-202ENST00000517533 HPS1Q92902 700 aa8.98□□□□□ -0.97
CTNNA1-202ENST00000517533 MEN1O00255 615 aa8.97□□□□□ -0.97
CTNNA1-202ENST00000517533 ZNF16P17020 682 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-202ENST00000517533 MAPK1P28482 360 aa8.97□□□□□ -0.97
CTNNA1-202ENST00000517533 KLRG1Q96E93 195 aa8.97□□□□□ -0.97
CTNNA1-202ENST00000517533 KIAA1522Q9P206 1035 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-202ENST00000517533 DCTN4Q9UJW0 460 aa8.97□□□□□ -0.97
CTNNA1-202ENST00000517533 TTC24A2A3L6 582 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-202ENST00000517533 FZD6O60353 706 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 NOS2P35228 1153 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 TEAD4Q15561 434 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 FBXO33Q7Z6M2 555 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 PPARGC1BQ86YN6 1023 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 MEIOBQ8N635 442 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 VTI1AQ96AJ9 217 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 NGLY1Q96IV0 654 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 ASB16Q96NS5 453 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 CCDC87Q9NVE4 849 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 HCN4Q9Y3Q4 1203 aa8.95□□□□□ -0.98
CTNNA1-202ENST00000517533 IGHA2P01877 340 aa8.94□□□□□ -0.98
CTNNA1-202ENST00000517533 EIF1AXP47813 144 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-202ENST00000517533 CYP4X1Q8N118 509 aa8.94□□□□□ -0.98
CTNNA1-202ENST00000517533 L3MBTL2Q969R5 705 aa8.94□□□□□ -0.98
CTNNA1-202ENST00000517533 TRIM52Q96A61 297 aa8.94□□□□□ -0.98
CTNNA1-202ENST00000517533 MYO19Q96H55 970 aa8.94□□□□□ -0.98
CTNNA1-202ENST00000517533 SERTM1A2A2V5 107 aa8.93□□□□□ -0.98
CTNNA1-202ENST00000517533 ERCC3P19447 782 aa8.93□□□□□ -0.98
CTNNA1-202ENST00000517533 HIRAP54198 1017 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-202ENST00000517533 TMC7Q7Z402 723 aa8.93□□□□□ -0.98
CTNNA1-202ENST00000517533 ATCAYQ86WG3 371 aa8.93□□□□□ -0.98
CTNNA1-202ENST00000517533 ETFBKMTQ8IXQ9 262 aa8.93□□□□□ -0.98
CTNNA1-202ENST00000517533 GIPC2Q8TF65 315 aa8.93□□□□□ -0.98
CTNNA1-202ENST00000517533 BCL2L13Q9BXK5 485 aa8.93□□□□□ -0.98
CTNNA1-202ENST00000517533 CABP1Q9NZU7 370 aa8.93□□□□□ -0.98
CTNNA1-202ENST00000517533 FAM13AO94988 1023 aa8.92□□□□□ -0.98
CTNNA1-202ENST00000517533 TXLNAP40222 546 aa8.92□□□□□ -0.98
CTNNA1-202ENST00000517533 ALDH16A1Q8IZ83 802 aa8.92□□□□□ -0.98
CTNNA1-202ENST00000517533 C7orf43Q8WVR3 580 aa8.92□□□□□ -0.98
CTNNA1-202ENST00000517533 INSM2Q96T92 566 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-202ENST00000517533 GRIP2Q9C0E4 1043 aa8.92□□□□□ -0.98
CTNNA1-202ENST00000517533 STIM2Q9P246 746 aa8.92□□□□□ -0.98
CTNNA1-202ENST00000517533 USP35Q9P2H5 1018 aa8.92□□□□□ -0.98
CTNNA1-202ENST00000517533 ZSCAN10Q96SZ4 725 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-202ENST00000517533 PHACTR1Q9C0D0 580 aa8.91□□□□□ -0.98
CTNNA1-202ENST00000517533 KLK14Q9P0G3 267 aa8.91□□□□□ -0.98
CTNNA1-202ENST00000517533 HSP90B1P14625 803 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 CTSOP43234 321 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 PRR20EP86478 221 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 PRR20CP86479 221 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 PRR20DP86480 221 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 PRR20BP86481 221 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 PRR20AP86496 221 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 RGL4Q8IZJ4 473 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 NLRP3Q96P20 1036 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 PUS7Q96PZ0 661 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 RBCK1Q9BYM8 510 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 ZNF232Q9UNY5 417 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 BCS1LQ9Y276 419 aa8.9□□□□□ -0.98
CTNNA1-202ENST00000517533 HMGB1P09429 215 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-202ENST00000517533 DGKZQ13574 1117 aa8.89□□□□□ -0.99
CTNNA1-202ENST00000517533 C4orf17Q53FE4 359 aa8.89□□□□□ -0.99
CTNNA1-202ENST00000517533 NBPF15Q8N660 670 aa8.89□□□□□ -0.99
CTNNA1-202ENST00000517533 MRRFQ96E11 262 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-202ENST00000517533 IGSF5Q9NSI5 407 aa8.89□□□□□ -0.99
CTNNA1-202ENST00000517533 SPINT1O43278 529 aa8.88□□□□□ -0.99
CTNNA1-202ENST00000517533 P4HBP07237 508 aaKnown RBP8.88□□□□□ -0.99
CTNNA1-202ENST00000517533 CDK11BP21127 795 aaKnown RBP8.88□□□□□ -0.99
CTNNA1-202ENST00000517533 RHBDD1Q8TEB9 315 aa8.88□□□□□ -0.99
CTNNA1-202ENST00000517533 CDK11AQ9UQ88 783 aaPredicted RBP8.88□□□□□ -0.99
CTNNA1-202ENST00000517533 GPR182O15218 404 aa8.87□□□□□ -0.99
CTNNA1-202ENST00000517533 RNF144AP50876 292 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-202ENST00000517533 RTN1Q16799 776 aa8.87□□□□□ -0.99
CTNNA1-202ENST00000517533 TMEM214Q6NUQ4 689 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-202ENST00000517533 NIFKQ9BYG3 293 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-202ENST00000517533 PLA2G4AP47712 749 aa8.86□□□□□ -0.99
CTNNA1-202ENST00000517533 DSC3Q14574 896 aa8.86□□□□□ -0.99
CTNNA1-202ENST00000517533 C11orf91Q3C1V1 193 aa8.86□□□□□ -0.99
CTNNA1-202ENST00000517533 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
CTNNA1-202ENST00000517533 FAM129BQ96TA1 746 aa8.86□□□□□ -0.99
CTNNA1-202ENST00000517533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.86□□□□□ -0.996e-7■■■■■ 62.1
CTNNA1-202ENST00000517533 RNF19AQ9NV58 838 aa8.86□□□□□ -0.99
CTNNA1-202ENST00000517533 CAPN5O15484 640 aaPredicted RBP8.85□□□□□ -0.99
CTNNA1-202ENST00000517533 TREHO43280 583 aa8.85□□□□□ -0.99
CTNNA1-202ENST00000517533 PHKA2P46019 1235 aa8.85□□□□□ -0.99
CTNNA1-202ENST00000517533 ZSCAN29Q8IWY8 852 aaPredicted RBP8.85□□□□□ -0.99
CTNNA1-202ENST00000517533 SETDB2Q96T68 719 aa8.85□□□□□ -0.99
CTNNA1-202ENST00000517533 BRPF3Q9ULD4 1205 aa8.85□□□□□ -0.99
CTNNA1-202ENST00000517533 POLIQ9UNA4 740 aa8.85□□□□□ -0.99
CTNNA1-202ENST00000517533 BRD2P25440 801 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-202ENST00000517533 GPC1P35052 558 aa8.84□□□□□ -0.99
CTNNA1-202ENST00000517533 FMR1Q06787 632 aaKnown RBP eCLIP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms