RNA–Protein interactions for RNA: ENST00000517460.2

IGHV3-30-2-201, Transcript of immunoglobulin heavy variable 3-30-2 (pseudogene), humanhuman

BASIC

Gene IGHV3-30-2, Length 355 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-2-201ENST00000517460 C5P01031 1676 aa14.01□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 MBIPQ9NS73 344 aa14□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 KCNQ3O43525 872 aa13.99□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 ITPK1Q13572 414 aa13.99□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 SLC15A2Q16348 729 aa13.99□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 DNAJC10Q8IXB1 793 aa13.99□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 TAF1LQ8IZX4 1826 aa13.99□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 ERBB4Q15303 1308 aa13.98□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 ZBED9Q6R2W3 1325 aa13.98□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 GIGYF1O75420 1035 aaPredicted RBP13.98□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 CYP19A1P11511 503 aaPredicted RBP13.98□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 SENP3-EIF4A1A0A087X0R7 540 aa13.97□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 CRKLP46109 303 aaKnown RBP13.97□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 KCNQ4P56696 695 aa13.97□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 RTCBQ9Y3I0 505 aaKnown RBP13.97□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 C4BP0C0L5 1744 aa13.97□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 TJP1Q07157 1748 aa13.97□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 COL5A3P25940 1745 aaPredicted RBP13.96□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 A0A087WZG4 1122 aa13.96□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 GNPATO15228 680 aa13.96□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 RPS6KA4O75676 772 aa13.96□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 SSFA2P28290 1259 aa13.96□□□□□ -0.17
IGHV3-30-2-201ENST00000517460 FANCIQ9NVI1 1328 aa13.95□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 SLFN5Q08AF3 891 aa13.95□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 DUSP27Q5VZP5 1158 aa13.95□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 LAMB4A4D0S4 1761 aa13.95□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 IL6STP40189 918 aaPredicted RBP13.94□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 QSER1Q2KHR3 1735 aa13.94□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 SLC16A10Q8TF71 515 aa13.94□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 TSR2Q969E8 191 aaKnown RBP13.94□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 CT47B1P0C2W7 299 aaPredicted RBP13.93□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 ZNF827Q17R98 1081 aa13.93□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 TRAPPC3LQ5T215 181 aa13.93□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 CCDC30Q5VVM6 783 aa13.93□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 INTS5Q6P9B9 1019 aaKnown RBP13.93□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 EIF2S2P20042 333 aaKnown RBP13.92□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 R3HDM1Q15032 1099 aaKnown RBP13.92□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 TWISTNBQ3B726 338 aaPredicted RBP13.92□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 DBF4Q9UBU7 674 aaPredicted RBP13.92□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.91□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 CANXP27824 592 aaKnown RBP13.91□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 DSG3P32926 999 aa13.91□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 RFC4P35249 363 aa13.91□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 EXOSC9Q06265 439 aaKnown RBP13.91□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 ZBTB1Q9Y2K1 713 aa13.91□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 UBR3Q6ZT12 1888 aa13.91□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 RGL2O15211 777 aa13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 ZPR1O75312 459 aa13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 PHF14O94880 888 aa13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 A1BGP04217 495 aa13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 EIF5P55010 431 aaKnown RBP13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 TRMT2AQ8IZ69 625 aaKnown RBP13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 C8orf58Q8NAV2 365 aa13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 DDX21Q9NR30 783 aaKnown RBP eCLIP13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 COL15A1P39059 1388 aa13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 MYH14Q7Z406 1995 aaKnown RBP13.9□□□□□ -0.18
IGHV3-30-2-201ENST00000517460 PNPLA7Q6ZV29 1317 aa13.9□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 ELL2O00472 640 aaPredicted RBP13.89□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 PSDA5PKW4 1024 aaPredicted RBP13.88□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 KIF6Q6ZMV9 814 aa13.88□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 ARHGEF1Q92888 912 aaKnown RBP13.88□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 CDCA7LQ96GN5 454 aa13.88□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 ZNF330Q9Y3S2 320 aaPredicted RBP13.88□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 VAMP4O75379 141 aa13.87□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 COL23A1Q86Y22 540 aaPredicted RBP13.87□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 NARFQ9UHQ1 456 aa13.87□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 ZNF652Q9Y2D9 606 aa13.87□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 TUBGCP6Q96RT7 1819 aa13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 NBPF26B4DH59 902 aa13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 MYL6BP14649 208 aa13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 NBPF10Q6P3W6 841 aaKnown RBP13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 DZIP3Q86Y13 1208 aaKnown RBP13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 NLGN1Q8N2Q7 840 aa13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 NBPF15Q8N660 670 aa13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 TSPYL6Q8N831 410 aa13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 MTFR1LQ9H019 292 aa13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 USP42Q9H9J4 1324 aaKnown RBP13.86□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 ERVV-1B6SEH8 477 aa13.85□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 DDX58O95786 925 aaKnown RBP13.85□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 CLEC4GQ6UXB4 293 aa13.85□□□□□ -0.19
IGHV3-30-2-201ENST00000517460 ARXQ96QS3 562 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms