RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GSC2O15499 205 aa1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 PTCD1O75127 700 aaKnown RBP1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 HOXA10P31260 410 aaPredicted RBP1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 LBRQ14739 615 aaKnown RBP1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 ERFEQ4G0M1 354 aa1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 ZNF468Q5VIY5 522 aaPredicted RBP1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 DESI1Q6ICB0 168 aa1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 LYPD8Q6UX82 237 aa1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 AMIGO3Q86WK7 504 aa1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 BHLHE22Q8NFJ8 381 aaPredicted RBP1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 PRR7Q8TB68 274 aa1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 ZIC5Q96T25 663 aa1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 MEN1O00255 615 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 CD33P20138 364 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 ALAS2P22557 587 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 RAP1GAPP47736 663 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 SLC27A3Q5K4L6 730 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 FAM182BQ5T319 152 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 C20orf204Q6ZNR8 217 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 ILDR2Q71H61 639 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 TAS1R3Q7RTX0 852 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 FMR1NBQ8N0W7 255 aaPredicted RBP1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 NAF1Q96HR8 494 aaKnown RBP1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 DNAAF2Q9NVR5 837 aaKnown RBP1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 CCDC39Q9UFE4 941 aa1.6□□□□□ -2.15
RNU6-542P-201ENST00000516405 E2F4Q16254 413 aa1.59□□□□□ -2.15
RNU6-542P-201ENST00000516405 FAM84AQ96KN4 292 aa1.59□□□□□ -2.15
RNU6-542P-201ENST00000516405 MENTQ9BUN1 341 aa1.59□□□□□ -2.15
RNU6-542P-201ENST00000516405 CARD14Q9BXL6 1004 aa1.59□□□□□ -2.15
RNU6-542P-201ENST00000516405 RAXQ9Y2V3 346 aa1.59□□□□□ -2.15
RNU6-542P-201ENST00000516405 ADAMTS20P59510 1910 aa1.59□□□□□ -2.15
RNU6-542P-201ENST00000516405 A0A1W2PRU2 124 aa1.58□□□□□ -2.16
RNU6-542P-201ENST00000516405 NFIAQ12857 509 aa1.58□□□□□ -2.16
RNU6-542P-201ENST00000516405 ZXDCQ2QGD7 858 aaPredicted RBP1.58□□□□□ -2.16
RNU6-542P-201ENST00000516405 SKOR2Q2VWA4 1001 aaPredicted RBP1.58□□□□□ -2.16
RNU6-542P-201ENST00000516405 PRRT2Q7Z6L0 340 aaPredicted RBP1.58□□□□□ -2.16
RNU6-542P-201ENST00000516405 ZCCHC2Q9C0B9 1178 aaKnown RBP1.58□□□□□ -2.16
RNU6-542P-201ENST00000516405 A0A0G2JLL6 359 aaPredicted RBP1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 A0A1B0GTH6 734 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 ADARB2-AS1A8MUL3 147 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 ALX3O95076 343 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 TSPAN15O95858 294 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 CSB-PGBD3P0DP91 1061 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 FDX1P10109 184 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 MAPTP10636 758 aaKnown RBP1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 PHKA2P46019 1235 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 RAC1P63000 192 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 TNP2Q05952 138 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 EFHC2Q5JST6 749 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 TP53INP2Q8IXH6 220 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 PGBD3Q8N328 593 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 ANGEL1Q9UNK9 670 aaKnown RBP1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 PCDHGC4Q9Y5F7 938 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 PITPNM2Q9BZ72 1349 aa1.57□□□□□ -2.16
RNU6-542P-201ENST00000516405 ERVH48-1M5A8F1 160 aa1.56□□□□□ -2.16
RNU6-542P-201ENST00000516405 SYN1P17600 705 aa1.56□□□□□ -2.16
RNU6-542P-201ENST00000516405 MSX1P28360 303 aa1.56□□□□□ -2.16
RNU6-542P-201ENST00000516405 SYT9Q86SS6 491 aa1.56□□□□□ -2.16
RNU6-542P-201ENST00000516405 STOML1Q9UBI4 398 aa1.56□□□□□ -2.16
RNU6-542P-201ENST00000516405 DCDC2BA2VCK2 349 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 KRT1P04264 644 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 ADRB1P08588 477 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 ANKLE2Q86XL3 938 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 DMRTC2Q8IXT2 367 aaPredicted RBP1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 TMEM40Q8WWA1 233 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 BORCS6Q96GS4 357 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 FBXL18Q96ME1 805 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 CRISPLD1Q9H336 500 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 STRN4Q9NRL3 753 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 PRR12Q9ULL5 1215 aa1.55□□□□□ -2.16
RNU6-542P-201ENST00000516405 ATXN7O15265 892 aaPredicted RBP1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 PER1O15534 1290 aaPredicted RBP1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 LILRB5O75023 590 aa1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 PRNPP04156 253 aa1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 HIC1Q14526 733 aa1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 MSMPQ1L6U9 139 aa1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 FAM168AQ92567 244 aa1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 TNFRSF25Q93038 417 aa1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 ZSCAN10Q96SZ4 725 aaPredicted RBP1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 CYLDQ9NQC7 956 aa1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP1.54□□□□□ -2.16
RNU6-542P-201ENST00000516405 HMX2A2RU54 273 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 SIN3BO75182 1162 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 INSRRP14616 1297 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 RAB15P59190 212 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 PUM1Q14671 1186 aaKnown RBP eCLIP1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 RNF43Q68DV7 783 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 FIGNL1Q6PIW4 674 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 IGF2-ASQ6U949 168 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 FBXO11Q86XK2 927 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 TRIM42Q8IWZ5 723 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 SHKBP1Q8TBC3 707 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 SLC10A4Q96EP9 437 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 NLRP3Q96P20 1036 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 DBNDD2Q9BQY9 259 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 AKTIPQ9H8T0 292 aa1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 PAK6Q9NQU5 681 aaPredicted RBP1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 CDV3Q9UKY7 258 aaKnown RBP1.53□□□□□ -2.16
RNU6-542P-201ENST00000516405 TNFRSF18Q9Y5U5 241 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms